vOTU vOTU-155437

vOTU: vOTU-155437

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-155437
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-11147 → vOTU-155437
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0172336
Biosample ID	SAMN09781759
Genome length (bp)	23,244 bps
CheckV completeness	54.88% (Medium-quality)
CDS count	40
CDS density	93.59%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	204	Host agreement	71.08
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0172336_3	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172336_4	UniRef90_A0A810QCC8	151.0	2.62e-38	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0172336_4	1235797.C816_04179	209.0	0	Chaperone of endosialidase	N/A
PHROG	UHGV-0172336_5	phrog_32308	44.7	0.00000000000023	N/A	unknown function
UniRef90	UHGV-0172336_5	UniRef90_A0A2Z4QA17	269.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0172336_5	1235797.C816_04180	315.0	0	N/A	N/A
structural_annotation	UHGV-0172336_5	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_6	phrog_1194	83.4	2.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0172336_6	1232443.BAIA02000078_gene17	125.0	1.17e-35	N/A	N/A
Pfam	UHGV-0172336_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0172336_6	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_7	phrog_1535	97.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0172336_7	UniRef90_A0A810PX76	163.0	7.54e-39	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0172336_7	1235797.C816_04182	288.0	0	SLT domain	N/A
COG	UHGV-0172336_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172336_7	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_8	phrog_806	77.6	1.5e-22	N/A	unknown function
UniRef90	UHGV-0172336_8	UniRef90_UPI00137B5163	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0172336_8	397290.C810_05150	143.0	1.19e-40	N/A	N/A
Pfam	UHGV-0172336_8	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0172336_8	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_9	phrog_706	122.7	2.9e-36	N/A	unknown function
UniRef90	UHGV-0172336_9	UniRef90_UPI000682A80B	248.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0172336_9	693746.OBV_18170	243.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0172336_9	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0172336_9	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_10	phrog_11299	86.7	3.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0172336_10	693746.OBV_18160	102.0	3.96e-26	N/A	N/A
structural_annotation	UHGV-0172336_10	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_11	phrog_3099	95.6	5.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-0172336_11	1232443.BAIA02000078_gene23	208.0	0	N/A	N/A
structural_annotation	UHGV-0172336_11	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_12	phrog_3266	47.1	0.0000000000004	tail completion	connector
eggNOG-mapper	UHGV-0172336_12	1232443.BAIA02000078_gene24	154.0	0	N/A	N/A
structural_annotation	UHGV-0172336_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_13	phrog_556	70.2	2.7e-20	minor head protein	head and packaging
UniRef90	UHGV-0172336_13	UniRef90_UPI00195E1497	187.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0172336_13	1226322.HMPREF1545_00054	149.0	1.68156e-44	Minor capsid protein	N/A
Pfam	UHGV-0172336_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0172336_13	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_14	phrog_3366	84.5	1.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0172336_14	1226322.HMPREF1545_00053	150.0	9.80909e-45	N/A	N/A
structural_annotation	UHGV-0172336_14	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_15	phrog_541	109.3	2.4e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-0172336_15	642492.Clole_0822	68.6	0.000000000000716	N/A	N/A
PHROG	UHGV-0172336_16	phrog_212	264.7	0	major head protein	head and packaging
UniRef90	UHGV-0172336_16	UniRef90_A0A354MR33	523.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0172336_16	935836.JAEL01000021_gene1494	344.0	0	N/A	N/A
structural_annotation	UHGV-0172336_16	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_17	phrog_194	95.1	1.1e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-0172336_17	UniRef90_A0A2Z4Q9Y8	111.0	2.26e-27	Minor structural protein	N/A
Pfam	UHGV-0172336_17	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0172336_17	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_18	phrog_1233	84.8	1.3e-24	N/A	unknown function
UniRef90	UHGV-0172336_18	UniRef90_UPI001C39EFB9	107.0	6.87e-28	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-0172336_18	357809.Cphy_2967	131.0	5.13e-38	N/A	N/A
Pfam	UHGV-0172336_19	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-0172336_22	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_23	phrog_581	290.4	0	minor head protein	head and packaging
UniRef90	UHGV-0172336_23	UniRef90_UPI001D080D49	582.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0172336_23	1226322.HMPREF1545_00046	374.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0172336_23	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0172336_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172336_23	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_24	phrog_533	361.9	0	portal protein	head and packaging
UniRef90	UHGV-0172336_24	UniRef90_UPI0006C81717	702.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0172336_24	1226322.HMPREF1545_00044	609.0	0	N/A	N/A
Pfam	UHGV-0172336_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0172336_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0172336_25	K06909	374.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0172336_25	phrog_3717	159.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0172336_25	UniRef90_A0A2U1BEH4	708.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0172336_25	33035.JPJF01000106_gene3136	467.0	0	Terminase small subunit	N/A
Pfam	UHGV-0172336_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0172336_25	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0172336_25	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0172336_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0172336_25	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0172336_26	K07474	111.3	1.8e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0172336_26	phrog_51	103.6	1.7e-30	terminase small subunit	head and packaging
UniRef90	UHGV-0172336_26	UniRef90_UPI001D05F697	166.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0172336_26	697281.Mahau_0566	82.8	3.08e-18	Terminase Small Subunit	N/A
Pfam	UHGV-0172336_26	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0172336_26	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0172336_26	PF03592,COG3728	N/A	N/A	N/A	N/A
UniRef90	UHGV-0172336_27	UniRef90_A0A285PYI3	61.6	0.000000000317	Homeodomain-like domain	N/A
eggNOG-mapper	UHGV-0172336_27	742738.HMPREF9460_02503	125.0	2.6e-36	N/A	N/A
structural_annotation	UHGV-0172336_27	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_30	phrog_1384	129.8	1.9e-38	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0172336_30	665956.HMPREF1032_03086	280.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0172336_30	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0172336_31	phrog_3377	178.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172336_31	UniRef90_UPI0013002188	133.0	4.44e-36	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0172336_31	500635.MITSMUL_03105	137.0	4e-37	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-0172336_31	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
PHROG	UHGV-0172336_32	phrog_38832	68.3	7.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0172336_32	665956.HMPREF1032_00143	68.6	0.00000000000199	N/A	N/A
PHROG	UHGV-0172336_34	phrog_27610	43.2	0.0000000000053	N/A	unknown function
KOfam	UHGV-0172336_35	K00558	40.6	0.00000000002	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0172336_35	phrog_757	121.9	4.2e-36	DNA methyltransferase	other
UniRef90	UHGV-0172336_35	UniRef90_A0A8D9PDD1	410.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-0172336_35	622312.ROSEINA2194_01264	365.0	0	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0172336_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0172336_35	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0172336_36	K00390	55.7	1.2e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0172336_36	phrog_424	141.6	5.5001e-42	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0172336_36	UniRef90_UPI001D097961	341.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0172336_36	1345695.CLSA_c30150	255.0	0	N/A	N/A
Pfam	UHGV-0172336_36	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0172336_36	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0172336_36	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-0172336_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0172336_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0172336_37	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0172336_38	K00571	101.8	8.8e-30	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0172336_38	phrog_23224	201.6	0	DNA methyltransferase	other
UniRef90	UHGV-0172336_38	UniRef90_A0A1Q6T6B8	363.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0172336_38	718252.FP2_06750	360.0	0	DNA methylase	N/A
PADLOC	UHGV-0172336_38	MTase_II_00172	89.0	1.8e-27	Type II methyltransferase	RM
Pfam	UHGV-0172336_38	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0172336_38	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0172336_38	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
Pfam	UHGV-0172336_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0172336_39	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0172336_40	K23779	48.8	1.8e-27	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0172336_40	phrog_8	78.2	5.8e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172336_40	UniRef90_A0A7X6YBU5	72.8	0.00000000000144	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0172336_40	246194.CHY_0550	64.7	0.000000000231	transcriptional regulator, XRE family	N/A
Pfam	UHGV-0172336_40	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0172336_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0172336_40	PF01381,PF13744,NF041951,COG3655,COG2944	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0172336	Yes	23,244	52	55	1