vOTU vOTU-155829

vOTU: vOTU-155829

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-155829
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vOTU-155829
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0013806
Biosample ID	N/A
Genome length (bp)	35,287 bps
CheckV completeness	86.78% (Medium-quality)
CDS count	57
CDS density	93.43%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	137	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0013806_1	K14059	180.4	0	int; integrase	N/A
PHROG	UHGV-0013806_1	phrog_1	163.1	0	integrase	integration and excision
UniRef90	UHGV-0013806_1	UniRef90_A0A367GI93	218.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_1	1507.HMPREF0262_00307	163.0	6.5861e-44	Phage integrase family	N/A
Pfam	UHGV-0013806_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0013806_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0013806_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_2	phrog_1373	44.1	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013806_2	UniRef90_A0A2A7B6N3	181.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0013806_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0013806_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0013806_2	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013806_6	COG5342	N/A	N/A	N/A	N/A
KOfam	UHGV-0013806_8	K22300	54.3	0.0000000000000029	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0013806_8	phrog_8	40.8	0.000000000043	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013806_8	UniRef90_A0A3D4L0P7	55.1	0.00000018	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0013806_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0013806_8	COG3780	N/A	N/A	DNA endonuclease related to intein-encoded endonucleases	N/A
structural_annotation	UHGV-0013806_8	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013806_9	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_12	phrog_28508	100.7	1e-29	N/A	unknown function
structural_annotation	UHGV-0013806_12	PF19005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013806_18	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_22	phrog_14970	46.6	0.00000000000064	N/A	unknown function
COG	UHGV-0013806_22	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0013806_22	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_23	phrog_72	48.1	0.00000000000022	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0013806_23	411471.SUBVAR_05829	139.0	2.58e-39	N/A	N/A
Pfam	UHGV-0013806_23	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0013806_23	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_25	phrog_7566	82.4	3.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0013806_25	411471.SUBVAR_05830	104.0	6.43e-28	N/A	N/A
KOfam	UHGV-0013806_26	K03111	146.1	3.60134e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0013806_26	phrog_44	149.9	1.26117e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013806_26	UniRef90_UPI001EE1A034	208.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0013806_26	748224.HMPREF9436_00638	216.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0013806_26	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0013806_26	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0013806_26	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0013806_26	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0013806_26	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_27	phrog_6969	52.0	0.0000000000000082	N/A	unknown function
eggNOG-mapper	UHGV-0013806_27	748224.HMPREF9436_00735	159.0	3.08286e-44	N/A	N/A
Pfam	UHGV-0013806_27	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-0013806_27	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0013806_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0013806_27	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0013806_28	K03496	206.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0013806_28	phrog_164	153.5	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013806_28	UniRef90_A0A2A7B6H3	359.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_28	411471.SUBVAR_05839	229.0	0	AAA domain	N/A
Pfam	UHGV-0013806_28	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0013806_28	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0013806_28	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0013806_29	UniRef90_UPI001C009709	110.0	1.75e-28	N/A	N/A
KOfam	UHGV-0013806_30	K03497	85.4	1.1e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0013806_30	phrog_4715	112.6	4.4e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013806_30	UniRef90_A0A2A7B6Q0	371.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_30	411471.SUBVAR_05842	174.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0013806_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0013806_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0013806_30	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013806_31	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_32	phrog_7711	105.4	3.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-0013806_32	1304866.K413DRAFT_1204	108.0	1.32e-28	N/A	N/A
structural_annotation	UHGV-0013806_33	PF14354	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_35	phrog_3136	129.9	6.5e-39	N/A	unknown function
UniRef90	UHGV-0013806_35	UniRef90_A0A329TS47	129.0	3.22e-34	ASCH domain-containing protein	N/A
COG	UHGV-0013806_35	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0013806_35	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_39	phrog_119	58.1	1.4e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013806_39	UniRef90_A0A2A7B6I3	227.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_39	768710.DesyoDRAFT_1275	104.0	2.33e-27	HNH nucleases	N/A
Pfam	UHGV-0013806_39	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0013806_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0013806_40	phrog_13845	54.4	0.0000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0013806_40	1399942.U3PDR2_9CAUD	64.3	0.0000000000127	N/A	N/A
structural_annotation	UHGV-0013806_40	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_41	phrog_9	240.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0013806_41	UniRef90_A0A2A7ALT4	1061.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0013806_41	610130.Closa_0741	635.0	0	Phage Terminase	N/A
Pfam	UHGV-0013806_41	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0013806_41	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0013806_41	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_42	phrog_12	129.5	2.4e-38	portal protein	head and packaging
UniRef90	UHGV-0013806_42	UniRef90_A0A2A7B6S8	551.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0013806_42	349161.Dred_2606	262.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0013806_42	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0013806_42	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0013806_42	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0013806_42	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0013806_43	K01358	75.6	8.8e-22	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0013806_43	phrog_94	126.8	2.5e-37	head maturation protease	head and packaging
UniRef90	UHGV-0013806_43	UniRef90_UPI00111E41DA	130.0	1.25e-33	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0013806_43	1232452.BAIB02000007_gene1626	122.0	1.78e-31	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0013806_43	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0013806_43	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0013806_43	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_44	phrog_10	129.8	1.6e-38	major head protein	head and packaging
UniRef90	UHGV-0013806_44	UniRef90_A0A2A7B712	723.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0013806_44	1235792.C808_00086	446.0	0	Phage capsid family	N/A
Pfam	UHGV-0013806_44	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0013806_44	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0013806_44	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0013806_44	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0013806_44	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_45	phrog_749	54.5	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0013806_45	UniRef90_A0A371IJS1	52.0	0.00000172	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0013806_45	1211817.CCAT010000053_gene2133	65.5	0.00000000000218	N/A	N/A
PHROG	UHGV-0013806_46	phrog_19734	92.0	6.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0013806_46	349161.Dred_2602	72.0	0.0000000000000217	N/A	N/A
structural_annotation	UHGV-0013806_46	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0013806_47	999413.HMPREF1094_02005	71.2	0.0000000000000125	N/A	N/A
structural_annotation	UHGV-0013806_47	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_48	phrog_5	49.3	0.000000000000089	tail completion or Neck1 protein	connector
UniRef90	UHGV-0013806_48	UniRef90_A0A1C6FG30	132.0	5.17e-36	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0013806_48	908340.HMPREF9406_2573	110.0	1.42e-28	N/A	N/A
NCBIFam	UHGV-0013806_48	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0013806_48	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_49	phrog_88	89.5	3.9e-26	major tail protein	tail
UniRef90	UHGV-0013806_49	UniRef90_G9YSC5	110.0	5.74e-27	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0013806_49	33035.JPJF01000039_gene278	73.9	0.000000000000144	N/A	N/A
NCBIFam	UHGV-0013806_49	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0013806_49	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_52	phrog_9959	90.2	1.3e-26	tail length tape measure protein	tail
UniRef90	UHGV-0013806_52	UniRef90_A0A2A7ALS3	701.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_52	1224164.B843_03450	176.0	2.51953e-42	Tail protein	N/A
Pfam	UHGV-0013806_52	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0013806_52	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0013806_52	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0013806_52	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_53	phrog_33	75.0	1.7e-21	distal tail protein Dit	tail
UniRef90	UHGV-0013806_53	UniRef90_A0A173Z1X4	144.0	3.48e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0013806_53	1487921.DP68_11370	91.7	1.33e-19	tail component	N/A
NCBIFam	UHGV-0013806_53	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0013806_53	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0013806_53	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_54	phrog_1067	177.3	0	minor head protein	head and packaging
UniRef90	UHGV-0013806_54	UniRef90_A0A2A7AM44	711.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0013806_54	1123263.AUKY01000068_gene489	187.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0013806_54	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0013806_54	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0013806_54	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0013806_54	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0013806_56	phrog_11541	63.2	1.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0013806_56	761193.Runsl_1251	87.4	0.0000000000000045	N/A	N/A
KOfam	UHGV-0013806_57	K07273	77.4	2.3e-22	acm; lysozyme	N/A
PHROG	UHGV-0013806_57	phrog_291	55.8	9.9e-16	endolysin	lysis
UniRef90	UHGV-0013806_57	UniRef90_A0A3D4VZ42	95.9	2.15e-24	Endolysin (Fragment)	N/A
eggNOG-mapper	UHGV-0013806_57	748224.HMPREF9436_00154	115.0	2.6e-31	hydrolase, family 25	N/A
Pfam	UHGV-0013806_57	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0013806_57	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0013806	Yes	35,287	52	87	1