vOTU vOTU-155935

vOTU: vOTU-155935

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-155935
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00022 → vGENUS-00037 → vOTU-155935
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1395166
Biosample ID	N/A
Genome length (bp)	57,163 bps
CheckV completeness	70.98% (Medium-quality)
CDS count	88
CDS density	84.77%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	33	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	16	Host agreement	68.75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1395166_1	phrog_4433	245.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1395166_1	665950.HMPREF1025_01373	197.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1395166_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1395166_7	phrog_373	147.4	9.94922e-44	anti-repressor	transcription regulation
UniRef90	UHGV-1395166_7	UniRef90_A0A1C5RZZ2	377.0	0	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-1395166_7	1347368.HG964404_gene4981	198.0	0	ORF6N domain	N/A
Pfam	UHGV-1395166_7	PF10543	N/A	N/A	ORF6N domain	ORF6N
Pfam	UHGV-1395166_7	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1395166_7	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1395166_7	PF10552,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1395166_11	UniRef90_A0A4Q5ERT3	204.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1395166_11	397290.C810_01441	74.7	0.00000000000000111	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1395166_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1395166_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1395166_11	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1395166_14	K07705	148.5	4.76441e-44	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-1395166_14	phrog_8810	140.7	9.39991e-42	N/A	unknown function
UniRef90	UHGV-1395166_14	UniRef90_A0A373NRE0	453.0	0	Stage 0 sporulation protein A homolog	N/A
eggNOG-mapper	UHGV-1395166_14	742740.HMPREF9474_03223	137.0	5.56e-37	LytTr DNA-binding domain	N/A
Pfam	UHGV-1395166_14	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-1395166_14	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-1395166_14	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-1395166_14	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
KOfam	UHGV-1395166_15	K01447	113.1	3.3e-33	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1395166_15	phrog_3088	165.5	0	amidase	lysis
UniRef90	UHGV-1395166_15	UniRef90_A0A173WJQ4	353.0	0	N-acetylmuramoyl-L-alanine amidase CwlH	N/A
eggNOG-mapper	UHGV-1395166_15	457412.RSAG_02159	252.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1395166_15	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1395166_15	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1395166_15	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1395166_15	PF01510,PF08230,NF008758,COG5632	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395166_17	PF07880	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_18	phrog_6616	721.0	0	tail protein	tail
UniRef90	UHGV-1395166_18	UniRef90_R5QUN9	913.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1395166_18	1121866.AUGK01000003_gene1439	301.0	0	Phage minor structural protein	N/A
COG	UHGV-1395166_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1395166_18	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_19	phrog_1194	124.4	4.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-1395166_19	1117108.PAALTS15_13512	72.4	0.00000000000000946	N/A	N/A
structural_annotation	UHGV-1395166_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_20	phrog_2657	216.8	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1395166_20	UniRef90_A0A373NQ98	431.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1395166_20	742740.HMPREF9474_03525	313.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-1395166_20	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1395166_20	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1395166_20	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1395166_20	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1395166_22	K07741	74.8	2.8e-21	antB; anti-repressor protein	N/A
PHROG	UHGV-1395166_22	phrog_373	110.9	1.4e-32	anti-repressor	transcription regulation
UniRef90	UHGV-1395166_22	UniRef90_UPI00156F56E8	285.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1395166_22	658655.HMPREF0988_02543	219.0	0	Phage regulatory protein	N/A
Pfam	UHGV-1395166_22	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1395166_22	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1395166_22	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1395166_22	PF10552,PF08346,NF008573,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-1395166_23	UniRef90_A0A1C5WHU9	73.9	3.56e-16	Ribbon-helix-helix protein, copG family	N/A
eggNOG-mapper	UHGV-1395166_23	1378168.N510_02331	59.3	0.0000000000362	Ribbon-helix-helix protein, copG family	N/A
structural_annotation	UHGV-1395166_23	PF01402,NF041793,COG3905	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_25	phrog_215	47.1	0.00000000000015	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-1395166_25	411459.RUMOBE_03882	122.0	6.09e-26	domain, Protein	N/A
Pfam	UHGV-1395166_25	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1395166_25	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
eggNOG-mapper	UHGV-1395166_26	1235793.C809_00537	55.1	0.00000000651	N/A	N/A
PHROG	UHGV-1395166_27	phrog_21101	43.2	0.000000000005	N/A	unknown function
UniRef90	UHGV-1395166_27	UniRef90_A0A412EKK3	135.0	9.99e-40	N/A	N/A
eggNOG-mapper	UHGV-1395166_27	877415.JNJQ01000017_gene246	107.0	4.17e-26	Prolyl oligopeptidase family	N/A
Pfam	UHGV-1395166_27	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1395166_27	COG4099	N/A	N/A	Predicted peptidase	N/A
structural_annotation	UHGV-1395166_27	PF07866,COG4728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_28	411473.RUMCAL_02525	150.0	0	N/A	N/A
PHROG	UHGV-1395166_29	phrog_2316	206.7	0	N/A	unknown function
UniRef90	UHGV-1395166_29	UniRef90_A0A373NQV5	398.0	0	N/A	N/A
eggNOG-mapper	UHGV-1395166_29	1280698.AUJS01000007_gene1022	295.0	0	N/A	N/A
Pfam	UHGV-1395166_29	PF16475	N/A	N/A	N/A	DUF5052
structural_annotation	UHGV-1395166_29	PF16475	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_30	1304866.K413DRAFT_3400	85.5	2.69e-19	N/A	N/A
PHROG	UHGV-1395166_31	phrog_270	46.3	0.00000000000052	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395166_31	UniRef90_A0A412EKX5	191.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1395166_31	397290.C810_01368	112.0	1.69e-25	N/A	N/A
Pfam	UHGV-1395166_31	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-1395166_31	PF13730,MF_01819,NF038251,COG1846	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395166_32	PF12990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395166_33	COG2004	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_34	phrog_28918	544.9	0	N/A	unknown function
UniRef90	UHGV-1395166_34	UniRef90_A0A1C5RYZ6	500.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1395166_34	97139.C824_02812	549.0	0	phage tail tape measure protein	N/A
COG	UHGV-1395166_34	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-1395166_37	476272.RUMHYD_01968	142.0	3.37993e-41	N/A	N/A
structural_annotation	UHGV-1395166_37	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_38	phrog_1129	88.0	5.6e-26	holin	lysis
UniRef90	UHGV-1395166_38	UniRef90_UPI001D072DD9	129.0	3.15e-37	phage holin family protein	N/A
eggNOG-mapper	UHGV-1395166_38	1304866.K413DRAFT_0135	124.0	5.06e-36	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1395166_38	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1395166_38	PF16079	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395166_39	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_40	476272.RUMHYD_01963	94.7	5.73e-22	N/A	N/A
AcrCatalog	UHGV-1395166_40	cluster_24841	74.3	1.18e-18	NA	N/A
structural_annotation	UHGV-1395166_41	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_42	phrog_11419	46.8	0.000000000000057	tail fiber protein	tail
eggNOG-mapper	UHGV-1395166_42	1232452.BAIB02000007_gene1610	126.0	9.28e-30	N/A	N/A
structural_annotation	UHGV-1395166_42	PF10651,PF14606	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_43	phrog_19695	60.5	4.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-1395166_43	1232452.BAIB02000007_gene1611	93.6	1.86e-23	N/A	N/A
structural_annotation	UHGV-1395166_43	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_45	phrog_374	134.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1395166_45	UniRef90_A0A2Z4QA49	148.0	4.33001e-41	AP2 protein	N/A
eggNOG-mapper	UHGV-1395166_45	411462.DORLON_00791	123.0	1.53e-32	N/A	N/A
UniRef90	UHGV-1395166_46	UniRef90_UPI001A185102	67.4	0.000000000000258	LLM class flavin-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-1395166_46	1414720.CBYM010000002_gene549	70.9	0.00000000000000175	N/A	N/A
structural_annotation	UHGV-1395166_46	PF20075,TIGR03070,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_49	1408437.JNJN01000043_gene802	160.0	0	N/A	N/A
PHROG	UHGV-1395166_50	phrog_16490	227.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1395166_50	1408437.JNJN01000043_gene803	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-1395166_51	476272.RUMHYD_01953	108.0	2.89e-30	N/A	N/A
PHROG	UHGV-1395166_52	phrog_21718	69.9	3.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-1395166_52	476272.RUMHYD_01952	105.0	1.14e-26	N/A	N/A
UniRef90	UHGV-1395166_53	UniRef90_A0A373NQ83	154.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
Pfam	UHGV-1395166_53	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1395166_53	PF04545,MF_00674,NF001067,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_54	phrog_937	55.6	4.2e-16	hemolysin	other
eggNOG-mapper	UHGV-1395166_55	476272.RUMHYD_01948	113.0	2.66e-31	N/A	N/A
PHROG	UHGV-1395166_57	phrog_29	146.0	2.70451e-43	major head protein	head and packaging
UniRef90	UHGV-1395166_57	UniRef90_A0A0E2H7J5	391.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1395166_57	1232443.BAIA02000078_gene29	291.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1395166_57	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1395166_57	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_58	phrog_909	73.2	3.1e-21	major head protein	head and packaging
UniRef90	UHGV-1395166_58	UniRef90_K1TUL5	61.6	0.000000000707	N/A	N/A
eggNOG-mapper	UHGV-1395166_58	1497679.EP56_02915	68.9	0.000000000000117	N/A	N/A
structural_annotation	UHGV-1395166_58	PF02924	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_59	1298920.KI911353_gene2662	54.7	0.00000212	N/A	N/A
PHROG	UHGV-1395166_60	phrog_64	175.9	0	portal protein	head and packaging
UniRef90	UHGV-1395166_60	UniRef90_A0A373NRD8	993.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1395166_60	1298920.KI911353_gene2663	567.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1395166_60	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1395166_60	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_61	phrog_36	67.2	3.3e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1395166_61	UniRef90_A0A373NRA4	255.0	0	N/A	N/A
eggNOG-mapper	UHGV-1395166_61	97138.C820_00221	68.6	0.000000000000915	sigma factor activity	N/A
Pfam	UHGV-1395166_61	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1395166_61	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1395166_61	PF07374,MF_00674,NF008895,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_62	phrog_38	154.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1395166_62	UniRef90_A0A7X2P7N6	461.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1395166_62	476272.RUMHYD_01940	898.0	0	TIGRFAM Phage	N/A
COG	UHGV-1395166_62	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1395166_62	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_64	phrog_13999	49.1	0.000000000000067	N/A	unknown function
eggNOG-mapper	UHGV-1395166_64	1391428.V5KT07_9CAUD	49.3	0.000000528	N/A	N/A
structural_annotation	UHGV-1395166_65	PF09454	N/A	N/A	N/A	N/A
UniRef90	UHGV-1395166_69	UniRef90_R8TJH1	150.0	3.12069e-42	N/A	N/A
NCBIFam	UHGV-1395166_72	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
KOfam	UHGV-1395166_79	K07741	69.4	1.2e-19	antB; anti-repressor protein	N/A
PHROG	UHGV-1395166_79	phrog_130	207.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1395166_79	UniRef90_A0A373NQ65	351.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-1395166_79	658659.HMPREF0983_01774	176.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-1395166_79	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1395166_79	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1395166_79	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1395166_79	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
Pfam	UHGV-1395166_80	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
eggNOG-mapper	UHGV-1395166_81	1232453.BAIF02000058_gene1620	81.6	1.3e-16	N/A	N/A
KOfam	UHGV-1395166_83	K07727	51.0	0.000000000000041	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1395166_83	UniRef90_A0A373NRV7	167.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1395166_83	1235802.C823_05131	79.0	1.77e-18	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1395166_83	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1395166_83	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1395166_85	397290.C810_01347	46.2	0.00000644	N/A	N/A
structural_annotation	UHGV-1395166_85	PF18267	N/A	N/A	N/A	N/A
PHROG	UHGV-1395166_87	phrog_8680	201.0	0	N/A	unknown function
UniRef90	UHGV-1395166_87	UniRef90_A0A373NQS6	450.0	0	N/A	N/A
eggNOG-mapper	UHGV-1395166_87	476272.RUMHYD_01896	223.0	0	N/A	N/A
Pfam	UHGV-1395166_87	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1395166_87	PF14386	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1395166	Yes	57,163	38	71	1