vOTU vOTU-156550

vOTU: vOTU-156550

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-156550
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_A → Enterococcus_A raffinosus
Taxonomy (UHGV)	vFAM-00003 → vOTU-156550
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_A → Enterococcus_A raffinosus
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0359378
Biosample ID	SAMEA4702349
Genome length (bp)	35,007 bps
CheckV completeness	77.39% (Medium-quality)
CDS count	49
CDS density	95.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_A → Enterococcus_A raffinosus	Total connections	8	Host agreement	87.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 77.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0359378_1	phrog_823	98.7	3.3e-29	N/A	unknown function
UniRef90	UHGV-0359378_1	UniRef90_UPI0010F935B7	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0359378_1	1158602.I590_02538	227.0	0	N/A	N/A
Pfam	UHGV-0359378_1	PF05595	N/A	N/A	N/A	DUF771
COG	UHGV-0359378_1	COG4707	N/A	N/A	Prophage pi2 protein 07	N/A
structural_annotation	UHGV-0359378_1	PF05595,COG4707	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_2	phrog_33733	157.7	0	N/A	unknown function
PHROG	UHGV-0359378_3	phrog_31743	295.4	0	N/A	unknown function
PHROG	UHGV-0359378_4	phrog_36781	65.9	4.7e-19	N/A	unknown function
PHROG	UHGV-0359378_5	phrog_36781	72.3	5.2e-21	N/A	unknown function
PHROG	UHGV-0359378_7	phrog_32095	464.4	0	N/A	unknown function
PHROG	UHGV-0359378_8	phrog_69	289.1	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_8	UniRef90_UPI001B8136B5	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-0359378_8	1158602.I590_02544	784.0	0	N/A	N/A
Pfam	UHGV-0359378_8	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0359378_8	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0359378_8	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_9	phrog_112	180.3	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_9	UniRef90_UPI0018C49B61	138.0	7.75e-37	N/A	N/A
eggNOG-mapper	UHGV-0359378_9	1158602.I590_02545	447.0	0	N/A	N/A
Pfam	UHGV-0359378_9	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
PHROG	UHGV-0359378_10	phrog_35053	324.1	0	N/A	unknown function
KOfam	UHGV-0359378_11	K02334	703.3	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0359378_11	phrog_17	351.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_11	UniRef90_R2QZZ8	1439.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0359378_11	1158602.I590_02547	1439.0	0	DNA polymerase family A	N/A
Pfam	UHGV-0359378_11	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0359378_11	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0359378_11	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_12	phrog_256	1002.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_12	UniRef90_UPI001CA7B4E3	721.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0359378_12	1158602.I590_02548	1621.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0359378_12	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0359378_12	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0359378_12	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_14	phrog_93	54.8	0.0000000000000014	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_14	UniRef90_UPI0007640954	235.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_14	469618.FVAG_01297	50.4	0.00000145	VRR_NUC	N/A
structural_annotation	UHGV-0359378_14	PF01870,MF_00130,NF002584,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0359378_15	K14440	124.1	8.1e-37	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0359378_15	phrog_62	372.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0359378_15	UniRef90_R2RM55	904.0	0	Helicase ATP-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_15	1158602.I590_02551	904.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0359378_15	ZorD1_00007	88.3	9.4e-26	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0359378_15	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0359378_15	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0359378_15	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0359378_15	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_17	phrog_3301	133.1	1.2e-39	pyrophosphatase	other
UniRef90	UHGV-0359378_17	UniRef90_A0A7W3SYW6	125.0	3.2e-34	NTP pyrophosphatase (Non-canonical NTP hydrolase)	N/A
eggNOG-mapper	UHGV-0359378_17	1158601.I585_00712	169.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-0359378_17	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0359378_17	COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_18	phrog_3915	78.4	5.2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0359378_18	1158602.I590_02553	160.0	0	N/A	N/A
PHROG	UHGV-0359378_19	phrog_1558	193.0	0	N/A	unknown function
UniRef90	UHGV-0359378_19	UniRef90_UPI00065E77F9	232.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_19	1158602.I590_02554	327.0	0	N/A	N/A
structural_annotation	UHGV-0359378_19	TIGR01637,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0359378_20	K07474	160.8	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0359378_20	phrog_51	148.8	2.8026e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0359378_20	UniRef90_UPI00065DDACC	211.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0359378_20	1158602.I590_02555	316.0	0	Terminase small subunit	N/A
Pfam	UHGV-0359378_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0359378_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0359378_20	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0359378_21	K06909	356.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0359378_21	phrog_3717	245.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0359378_21	UniRef90_R2RM60	831.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0359378_21	1158602.I590_02556	831.0	0	Terminase-like family	N/A
Pfam	UHGV-0359378_21	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0359378_21	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0359378_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0359378_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0359378_21	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0359378_21	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_22	phrog_16447	195.7	0	N/A	unknown function
UniRef90	UHGV-0359378_22	UniRef90_A0A3D1J9C7	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0359378_22	1158614.I592_00605	194.0	0	N/A	N/A
Pfam	UHGV-0359378_22	PF10083	N/A	N/A	N/A	DUF2321
COG	UHGV-0359378_22	COG4306	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0359378_22	PF10083,COG4306	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_23	phrog_64	309.9	0	portal protein	head and packaging
UniRef90	UHGV-0359378_23	UniRef90_A0A1L8WTQ2	842.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0359378_23	1158602.I590_02557	922.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0359378_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0359378_23	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_24	phrog_30839	156.2	0	N/A	unknown function
PHROG	UHGV-0359378_25	phrog_595	340.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0359378_25	UniRef90_R2NYG1	1057.0	0	SPP1 gp7 family phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0359378_25	1158602.I590_02559	1057.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0359378_25	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0359378_25	PF03496	N/A	N/A	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
NCBIFam	UHGV-0359378_25	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0359378_25	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_26	phrog_14006	178.6	0	N/A	unknown function
PHROG	UHGV-0359378_27	phrog_5859	137.7	2.4e-41	N/A	unknown function
eggNOG-mapper	UHGV-0359378_27	1158602.I590_02562	170.0	0	N/A	N/A
structural_annotation	UHGV-0359378_27	PF03927,MF_02200,NF009840,COG3471	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_28	phrog_194	81.2	8.8e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-0359378_28	UniRef90_UPI001478DC00	92.8	2.84e-20	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0359378_28	1158602.I590_02564	315.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0359378_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0359378_29	phrog_422	308.7	0	major head protein	head and packaging
UniRef90	UHGV-0359378_29	UniRef90_D3H782	435.0	0	Main capsid protein Gp34-like protein	N/A
eggNOG-mapper	UHGV-0359378_29	1158602.I590_02565	597.0	0	N/A	N/A
structural_annotation	UHGV-0359378_29	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_30	phrog_1378	115.3	1.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-0359378_30	1158602.I590_02566	237.0	0	N/A	N/A
PHROG	UHGV-0359378_31	phrog_1236	245.3	0	head protein	head and packaging
UniRef90	UHGV-0359378_31	UniRef90_A0A098AQ51	160.0	0	Putative prophage protein	N/A
eggNOG-mapper	UHGV-0359378_31	1158602.I590_02567	351.0	0	N/A	N/A
structural_annotation	UHGV-0359378_31	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_32	phrog_1059	109.2	2e-32	head-tail adaptor	connector
UniRef90	UHGV-0359378_32	UniRef90_A0A3D1J9B0	160.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0359378_32	1123312.KB904569_gene351	56.2	0.00000000737	N/A	N/A
structural_annotation	UHGV-0359378_32	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_33	phrog_5	63.2	5.9e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0359378_33	UniRef90_R2NYH0	271.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0359378_33	1158602.I590_02569	271.0	0	N/A	N/A
Pfam	UHGV-0359378_33	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0359378_33	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_34	phrog_957	123.8	6.5e-37	head protein	head and packaging
eggNOG-mapper	UHGV-0359378_34	1158602.I590_02570	261.0	0	N/A	N/A
structural_annotation	UHGV-0359378_34	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_35	phrog_885	235.5	0	major tail protein	tail
UniRef90	UHGV-0359378_35	UniRef90_A0A098ANP7	177.0	0	Putative prophage protein	N/A
eggNOG-mapper	UHGV-0359378_35	1158602.I590_02571	457.0	0	N/A	N/A
structural_annotation	UHGV-0359378_35	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_36	phrog_1021	150.6	5.60519e-45	N/A	unknown function
PHROG	UHGV-0359378_37	phrog_30816	174.3	0	N/A	unknown function
PHROG	UHGV-0359378_38	phrog_58	324.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0359378_38	UniRef90_A0A1L8WTT3	1264.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_38	1158602.I590_02574	1145.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0359378_38	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0359378_38	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0359378_38	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0359378_38	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_39	phrog_33	73.8	4.1e-21	distal tail protein Dit	tail
UniRef90	UHGV-0359378_39	UniRef90_UPI001D160581	340.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0359378_39	1158602.I590_02575	445.0	0	tail component	N/A
COG	UHGV-0359378_39	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0359378_39	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_40	phrog_1067	689.0	0	minor head protein	head and packaging
UniRef90	UHGV-0359378_40	UniRef90_A0A1L8WUC3	1748.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0359378_40	1158602.I590_02576	1366.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0359378_40	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0359378_40	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0359378_40	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
NCBIFam	UHGV-0359378_40	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0359378_40	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0359378_40	PF14594,PF01551,PF18013,TIGR01665,NF040883,COG4926,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_41	phrog_11857	277.5	0	N/A	unknown function
UniRef90	UHGV-0359378_41	UniRef90_A0A1L8WTN7	351.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_41	1158607.UAU_01043	239.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0359378_41	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0359378_41	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0359378_41	COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_42	phrog_8913	421.1	0	minor head protein	head and packaging
UniRef90	UHGV-0359378_42	UniRef90_A0A1L8WTQ1	603.0	0	BppU_IgG domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_42	1158602.I590_02578	691.0	0	N/A	N/A
Pfam	UHGV-0359378_42	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0359378_42	PF18667	N/A	N/A	Baseplate upper protein immunoglobulin like domain	BppU_IgG
structural_annotation	UHGV-0359378_42	PF10651,PF18667,NF040788,COG5513	N/A	N/A	N/A	N/A
KOfam	UHGV-0359378_43	K20846	54.7	0.000000000000001	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-0359378_43	phrog_341	136.4	1.4e-40	major tail protein	tail
UniRef90	UHGV-0359378_43	UniRef90_R2NYH8	285.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0359378_43	1158602.I590_02579	285.0	0	Bacterial Ig-like domain 2	N/A
Pfam	UHGV-0359378_43	PF00041	N/A	N/A	Fibronectin type III domain	fn3
Pfam	UHGV-0359378_43	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-0359378_43	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0359378_43	PF02368,PF07495,MF_04116,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_44	phrog_35525	316.8	0	N/A	unknown function
UniRef90	UHGV-0359378_44	UniRef90_R2P1E8	265.0	0	Fibronectin type-III domain-containing protein	N/A
Pfam	UHGV-0359378_44	PF18667	N/A	N/A	Baseplate upper protein immunoglobulin like domain	BppU_IgG
PHROG	UHGV-0359378_45	phrog_7389	70.9	1.5e-20	tail fiber protein	tail
eggNOG-mapper	UHGV-0359378_45	1158602.I590_02581	272.0	0	N/A	N/A
PHROG	UHGV-0359378_46	phrog_7298	99.9	1.3e-29	N/A	unknown function
eggNOG-mapper	UHGV-0359378_46	1158602.I590_02582	199.0	0	N/A	N/A
PHROG	UHGV-0359378_47	phrog_1382	67.0	1.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-0359378_47	1158602.I590_02583	88.2	4.54e-23	N/A	N/A
NCBIFam	UHGV-0359378_47	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0359378_47	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_48	phrog_199	81.4	1.1e-23	holin	lysis
UniRef90	UHGV-0359378_48	UniRef90_R2NYI3	260.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0359378_48	1158602.I590_02584	260.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0359378_48	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0359378_48	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0359378_48	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0359378_48	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0359378_49	phrog_32897	69.0	4.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0359378_49	1158602.I590_02585	55.8	0.000000000114	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0359378	Yes	35,007	42	77	1