vOTU vOTU-156599

vOTU: vOTU-156599

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-156599
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00831 → vOTU-156599
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0034724
Biosample ID	SAMEA4969129
Genome length (bp)	51,773 bps
CheckV completeness	87.72% (Medium-quality)
CDS count	65
CDS density	94.61%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	381	Host agreement	75.85
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0034724_1	UniRef90_A0A7M1RTM1	97.8	1.32e-22	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0034724_1	1378168.N510_03079	61.6	0.0000000029	N/A	N/A
structural_annotation	UHGV-0034724_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_3	phrog_16490	80.0	3.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0034724_3	658655.HMPREF0988_00917	80.5	0.00000000000000268	N/A	N/A
eggNOG-mapper	UHGV-0034724_4	476272.RUMHYD_01953	49.7	0.00000062	N/A	N/A
PHROG	UHGV-0034724_5	phrog_21718	44.8	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0034724_8	1392502.JNIO01000008_gene1280	226.0	0	N/A	N/A
structural_annotation	UHGV-0034724_8	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_11	phrog_10089	1674.3	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0034724_11	UniRef90_UPI001891FB73	786.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0034724_11	278957.ABEA03000004_gene4552	1112.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0034724_11	PF18809	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	PBECR1
Pfam	UHGV-0034724_11	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0034724_11	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
Pfam	UHGV-0034724_11	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0034724_11	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0034724_11	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
eggNOG-mapper	UHGV-0034724_13	1232428.CAVO010000067_gene416	166.0	0	N/A	N/A
structural_annotation	UHGV-0034724_14	PF00765,MF_02210,NF007644,COG2153	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034724_15	883156.HMPREF9282_00569	221.0	0	N/A	N/A
structural_annotation	UHGV-0034724_15	PF11134,MF_03008,NF010237,TIGR04362,COG4257	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_16	phrog_1141	63.3	3.4e-18	tail fiber protein	tail
UniRef90	UHGV-0034724_16	UniRef90_A0A1Q6R2G9	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034724_16	1217710.F969_02498	54.7	0.000000582	N/A	N/A
Pfam	UHGV-0034724_16	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0034724_16	PF14301	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034724_17	PF16116	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034724_18	742735.HMPREF9467_00719	62.8	0.0000000258	N/A	N/A
KOfam	UHGV-0034724_20	K19719	141.5	1.49939e-42	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0034724_20	phrog_819	134.1	0	tail protein	tail
Pfam	UHGV-0034724_20	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0034724_20	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
structural_annotation	UHGV-0034724_20	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_21	phrog_6061	52.4	0.0000000000000087	N/A	unknown function
PHROG	UHGV-0034724_23	phrog_32822	58.7	4e-17	virion structural protein	head and packaging
UniRef90	UHGV-0034724_23	UniRef90_A0A1G6NQU3	316.0	0	Flagellin FlgL	N/A
eggNOG-mapper	UHGV-0034724_23	1401067.HMPREF0872_03800	135.0	1.3e-29	cellulase activity	N/A
COG	UHGV-0034724_23	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-0034724_24	phrog_399	50.5	0.000000000000018	structural protein	head and packaging
Pfam	UHGV-0034724_24	PF20387	N/A	N/A	N/A	DUF6682
structural_annotation	UHGV-0034724_24	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_25	phrog_334	296.2	0	major head protein	head and packaging
UniRef90	UHGV-0034724_25	UniRef90_A0A316SB53	438.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0034724_25	401526.TcarDRAFT_1286	317.0	0	N/A	N/A
Pfam	UHGV-0034724_25	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0034724_25	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0034724_25	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_28	phrog_156	424.6	0	portal protein	head and packaging
UniRef90	UHGV-0034724_28	UniRef90_F7NK66	509.0	0	Putative phage portal protein	N/A
eggNOG-mapper	UHGV-0034724_28	401526.TcarDRAFT_1284	537.0	0	Tfp pilus assembly protein FimV	N/A
COG	UHGV-0034724_28	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
structural_annotation	UHGV-0034724_28	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034724_29	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
KOfam	UHGV-0034724_30	K06909	261.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0034724_30	phrog_3717	231.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0034724_30	UniRef90_A0A316S7L1	765.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0034724_30	1009370.ALO_12436	571.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0034724_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0034724_30	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0034724_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0034724_30	PF04466,PF20454,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0034724_31	K07474	86.5	6.8e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0034724_31	phrog_51	87.8	1.2e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0034724_31	UniRef90_A0A1I0K7H5	100.0	1.89e-24	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0034724_31	1391647.AVSV01000003_gene1801	95.5	5.19e-23	Terminase small subunit	N/A
Pfam	UHGV-0034724_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0034724_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0034724_31	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034724_32	1280689.AUJC01000003_gene960	49.7	0.00000221	N/A	N/A
PHROG	UHGV-0034724_35	phrog_99	59.9	3.3e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034724_35	UniRef90_A0A265Q747	134.0	9.39e-36	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-0034724_35	903814.ELI_3180	113.0	2.24e-28	N/A	N/A
Pfam	UHGV-0034724_35	PF00847	N/A	N/A	AP2 domain	AP2
structural_annotation	UHGV-0034724_35	PF18337,PF00847	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_36	phrog_2329	72.6	3e-21	N/A	unknown function
UniRef90	UHGV-0034724_36	UniRef90_UPI001AEB4F95	67.4	0.000000000000128	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0034724_36	1120746.CCNL01000005_gene152	66.6	0.000000000000674	N/A	N/A
Pfam	UHGV-0034724_36	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
structural_annotation	UHGV-0034724_36	PF04014,NF007312,COG2336	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034724_37	401526.TcarDRAFT_1279	78.6	2.19e-16	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0034724_37	PF05263,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_38	phrog_190	143.8	8.99634e-43	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034724_38	UniRef90_UPI0018C4B0C5	129.0	1.31e-36	N/A	N/A
eggNOG-mapper	UHGV-0034724_38	1347392.CCEZ01000043_gene417	119.0	2.27e-33	N/A	N/A
Pfam	UHGV-0034724_38	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0034724_38	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0034724_39	K03111	142.2	5.09933e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0034724_39	phrog_44	151.2	5.60519e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034724_39	UniRef90_R6WK64	245.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0034724_39	626939.HMPREF9443_01150	172.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0034724_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0034724_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0034724_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0034724_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0034724_39	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034724_41	PF16857,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_44	phrog_1454	47.6	0.00000000000026	N/A	unknown function
UniRef90	UHGV-0034724_47	UniRef90_A0A6N7WVF3	62.4	0.000000000966	Restriction endonuclease subunit S	N/A
PHROG	UHGV-0034724_51	phrog_3878	49.1	0.000000000000087	N/A	unknown function
UniRef90	UHGV-0034724_55	UniRef90_A0A316S7J6	99.8	6.46e-23	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0034724_55	1280706.AUJE01000046_gene1152	70.1	0.00000000000247	N/A	N/A
structural_annotation	UHGV-0034724_55	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_56	phrog_270	105.5	6e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034724_56	UniRef90_UPI0011DDD220	102.0	4.01e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0034724_56	1232453.BAIF02000016_gene3127	105.0	1.57e-23	N/A	N/A
Pfam	UHGV-0034724_56	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0034724_56	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0034724_56	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_57	phrog_72	58.9	7e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0034724_57	1507.HMPREF0262_00432	115.0	6.37e-30	N/A	N/A
structural_annotation	UHGV-0034724_57	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_58	phrog_2324	152.8	1.4013e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034724_58	UniRef90_UPI001032CF2B	155.0	9.66896e-44	ERF family protein	N/A
eggNOG-mapper	UHGV-0034724_58	1476583.DEIPH_ctg011orf0057	112.0	8.77e-28	Erf family	N/A
Pfam	UHGV-0034724_58	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0034724_58	PF04404,TIGR00607	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_60	phrog_14367	47.3	0.00000000000013	N/A	unknown function
UniRef90	UHGV-0034724_60	UniRef90_R6WTN1	79.3	2.99e-17	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-0034724_60	478749.BRYFOR_06242	53.1	0.0000000539	LysM domain	N/A
Pfam	UHGV-0034724_60	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0034724_60	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0034724_60	MF_02014,NF010723	N/A	N/A	N/A	N/A
PHROG	UHGV-0034724_64	phrog_3292	48.3	0.00000000000014	N/A	unknown function
UniRef90	UHGV-0034724_64	UniRef90_A0A6G3M1P8	68.6	0.000000000000132	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0034724_64	1114964.L485_15515	58.5	0.000000000184	KTSC domain	N/A
Pfam	UHGV-0034724_64	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0034724_64	COG1190	N/A	N/A	Lysyl-tRNA synthetase (class II)	N/A
structural_annotation	UHGV-0034724_64	PF13619	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034724	Yes	51,773	45	88	1