vOTU vOTU-156895

vOTU: vOTU-156895

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-156895
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01285 → vGENUS-01868 → vOTU-156895
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1443547
Biosample ID	SAMEA2152443
Genome length (bp)	29,046 bps
CheckV completeness	63.73% (Medium-quality)
CDS count	52
CDS density	90.74%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	25	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia → Faecousia sp900544405	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1443547_1	397290.C810_01419	162.0	1.29e-38	Transglycosylase SLT domain	N/A
COG	UHGV-1443547_1	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1443547_2	phrog_1194	57.0	3.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-1443547_2	445972.ANACOL_01864	55.1	0.0000000609	N/A	N/A
structural_annotation	UHGV-1443547_2	PF20458,TIGR02126,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_3	phrog_18190	111.7	2.3e-35	N/A	unknown function
UniRef90	UHGV-1443547_3	UniRef90_A0A416L7Z5	83.2	0.000000000000364	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1443547_3	411471.SUBVAR_06932	236.0	0	N/A	N/A
structural_annotation	UHGV-1443547_3	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_4	phrog_372	196.3	0	tail protein	tail
UniRef90	UHGV-1443547_4	UniRef90_UPI001373A0FD	164.0	4.55e-40	N/A	N/A
eggNOG-mapper	UHGV-1443547_4	1235802.C823_05263	144.0	9.77e-34	N/A	N/A
Pfam	UHGV-1443547_4	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1443547_4	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1443547_4	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_5	K07273	211.7	0	acm; lysozyme	N/A
PHROG	UHGV-1443547_5	phrog_291	154.3	1.4013e-45	endolysin	lysis
UniRef90	UHGV-1443547_5	UniRef90_A0A3D1HW72	268.0	0	1,4-beta-N-acetylmuramidase	N/A
eggNOG-mapper	UHGV-1443547_5	1232453.BAIF02000060_gene1728	227.0	0	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-1443547_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1443547_5	PF01476	N/A	N/A	LysM domain	LysM
Pfam	UHGV-1443547_5	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1443547_5	COG0737	N/A	N/A	2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family	N/A
structural_annotation	UHGV-1443547_5	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_6	K24213	61.7	8.2e-18	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1443547_6	phrog_819	66.3	3e-19	tail protein	tail
Pfam	UHGV-1443547_6	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1443547_6	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
KOfam	UHGV-1443547_7	K17256	46.3	0.000000000000022	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-1443547_7	phrog_35892	103.8	0	N/A	unknown function
Pfam	UHGV-1443547_7	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
Pfam	UHGV-1443547_7	PF13855	N/A	N/A	Leucine rich repeat	LRR_8
structural_annotation	UHGV-1443547_7	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_8	phrog_4105	98.5	3.9e-29	N/A	unknown function
UniRef90	UHGV-1443547_8	UniRef90_A0A8D9UHA9	127.0	5e-36	Holin protein	N/A
eggNOG-mapper	UHGV-1443547_8	742733.HMPREF9469_05011	134.0	8.75999e-40	N/A	N/A
PHROG	UHGV-1443547_9	phrog_881	86.0	2.3e-25	holin	lysis
UniRef90	UHGV-1443547_9	UniRef90_A0A4Q7P349	110.0	1.36e-30	Dp-1 family holin	N/A
eggNOG-mapper	UHGV-1443547_9	742740.HMPREF9474_02251	110.0	4.98e-31	Putative phage holin Dp-1	N/A
Pfam	UHGV-1443547_9	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1443547_9	PF16938	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443547_10	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443547_14	UniRef90_UPI00164AED9E	83.6	1.72e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1443547_14	1235798.C817_04600	59.7	0.000000000597	N/A	N/A
structural_annotation	UHGV-1443547_14	NF040522,COG2944	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_16	K06400	388.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1443547_16	phrog_95	378.1	0	integrase	integration and excision
UniRef90	UHGV-1443547_16	UniRef90_UPI00164E9A6A	481.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1443547_16	718252.FP2_29980	342.0	0	N/A	N/A
Pfam	UHGV-1443547_16	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1443547_16	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1443547_16	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1443547_16	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1443547_16	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1443547_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1443547_17	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_19	K22300	57.9	2.4e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1443547_19	phrog_8	42.9	0.0000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-1443547_19	UniRef90_A0A810Q5N3	112.0	2.56e-29	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1443547_19	411471.SUBVAR_05818	92.8	1.23e-22	sequence-specific DNA binding	N/A
Pfam	UHGV-1443547_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1443547_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1443547_19	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443547_20	PF04314,NF041740,COG2847	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_25	K07699	95.4	6.4e-28	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-1443547_25	phrog_37855	66.6	2.9e-19	N/A	unknown function
UniRef90	UHGV-1443547_25	UniRef90_UPI0017495239	96.7	1.26e-21	sporulation transcription factor Spo0A	N/A
eggNOG-mapper	UHGV-1443547_25	498761.HM1_0304	87.8	5.52e-19	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-1443547_25	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1443547_25	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
eggNOG-mapper	UHGV-1443547_27	1121091.AUMP01000032_gene3076	45.4	0.00000573	N/A	N/A
PHROG	UHGV-1443547_29	phrog_434	327.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443547_29	UniRef90_A0A3D3XZF3	286.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1443547_29	428125.CLOLEP_01823	270.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1443547_29	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1443547_29	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1443547_29	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1443547_29	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_30	K07455	297.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1443547_30	phrog_148	271.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443547_30	UniRef90_U2SBP2	371.0	0	Recombination and repair protein RecT	N/A
eggNOG-mapper	UHGV-1443547_30	1226322.HMPREF1545_00015	371.0	0	RecT family	N/A
Pfam	UHGV-1443547_30	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1443547_30	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1443547_30	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1443547_30	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_31	K03111	123.7	2.4e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1443547_31	phrog_44	128.8	4.1e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443547_31	UniRef90_A0A3D2HZK1	163.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1443547_31	693746.OBV_19910	157.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1443547_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1443547_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1443547_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1443547_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1443547_31	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_32	K01160	55.9	0.0000000000000012	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1443547_32	phrog_140	131.4	4.9e-39	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1443547_32	UniRef90_L1Q8K9	135.0	3.1e-38	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1443547_32	545697.HMPREF0216_02819	135.0	5.2e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1443547_32	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1443547_32	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1443547_32	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_33	phrog_16304	79.2	4.3e-23	N/A	unknown function
UniRef90	UHGV-1443547_33	UniRef90_UPI001D074B07	112.0	1.19e-26	N/A	N/A
eggNOG-mapper	UHGV-1443547_33	343509.SG1178	91.7	1.29e-18	N/A	N/A
Pfam	UHGV-1443547_33	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1443547_33	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_34	phrog_9804	126.3	2.1e-37	N/A	unknown function
UniRef90	UHGV-1443547_34	UniRef90_A0A174S716	186.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-1443547_34	585394.RHOM_14005	117.0	1.57e-30	Loader and inhibitor of phage G40P	N/A
AcrCatalog	UHGV-1443547_34	cluster_137185	118.0	1.15e-35	NA	N/A
Pfam	UHGV-1443547_34	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-1443547_34	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1443547_36	K00558	44.7	8.4e-18	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1443547_36	phrog_16528	84.4	1.5e-24	DNA methyltransferase	other
UniRef90	UHGV-1443547_36	UniRef90_A0A1Q6KPR6	172.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1443547_36	657322.FPR_26610	175.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-1443547_36	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1443547_36	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-1443547_40	K21919	64.1	1.3e-18	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-1443547_40	phrog_9562	105.7	9e-32	N/A	unknown function
eggNOG-mapper	UHGV-1443547_40	1226322.HMPREF1545_00011	146.0	2.87995e-41	Pentapeptide repeats (8 copies)	N/A
Pfam	UHGV-1443547_40	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-1443547_40	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-1443547_40	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443547_40	PF19062,PF13599,NF000139	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_44	phrog_924	40.5	0.000000000058	N/A	unknown function
UniRef90	UHGV-1443547_44	UniRef90_A0A3A6ECV8	104.0	7.2e-27	N/A	N/A
eggNOG-mapper	UHGV-1443547_44	411470.RUMGNA_00214	83.6	2.45e-18	N/A	N/A
Pfam	UHGV-1443547_44	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1443547_44	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1443547_47	phrog_38832	74.6	2.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1443547_47	445972.ANACOL_00165	82.0	6.64e-17	N/A	N/A
structural_annotation	UHGV-1443547_47	PF10781	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1443547_50	PF21166	N/A	N/A	N/A	N/A
UniRef90	UHGV-1443547_52	UniRef90_UPI001D07B715	131.0	1.95e-35	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1443547_52	1235793.C809_00539	56.6	0.000000221	N/A	N/A
Pfam	UHGV-1443547_52	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1443547	Yes	29,046	53	64	1