vOTU vOTU-156976

vOTU: vOTU-156976

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-156976
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01615 → vGENUS-23455 → vOTU-156976
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Sellimonas → Sellimonas intestinalis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2007928
Biosample ID	N/A
Genome length (bp)	32,194 bps
CheckV completeness	85.45% (Medium-quality)
CDS count	49
CDS density	94.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena	Total connections	14	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Sellimonas → Sellimonas intestinalis	Total connections	107	Host agreement	95.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.45)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2007928_2	K03546	52.5	0.0000000000000052	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-2007928_2	phrog_1499	499.5	0	N/A	unknown function
UniRef90	UHGV-2007928_2	UniRef90_UPI00195DA8B3	721.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2007928_2	1235792.C808_05391	626.0	0	AAA domain	N/A
Pfam	UHGV-2007928_2	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2007928_2	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2007928_2	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_3	phrog_124	254.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2007928_3	UniRef90_UPI00195E1D01	649.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2007928_3	411462.DORLON_00811	508.0	0	AAA domain	N/A
Pfam	UHGV-2007928_3	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2007928_3	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_4	phrog_2698	216.0	0	N/A	unknown function
UniRef90	UHGV-2007928_4	UniRef90_UPI00195E7908	281.0	0	N/A	N/A
eggNOG-mapper	UHGV-2007928_4	394503.Ccel_3308	196.0	0	N/A	N/A
structural_annotation	UHGV-2007928_4	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-2007928_5	K17677	347.2	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-2007928_5	phrog_16	278.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2007928_5	UniRef90_UPI001956F25A	981.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-2007928_5	1235792.C808_05388	904.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-2007928_5	mREase_IV_00005	131.5	7.6e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2007928_5	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2007928_5	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2007928_5	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-2007928_5	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-2007928_6	K07505	406.2	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-2007928_6	phrog_2597	1209.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2007928_6	UniRef90_UPI00195D662E	1414.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2007928_6	411462.DORLON_00808	1181.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-2007928_6	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-2007928_6	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-2007928_6	COG3598	N/A	N/A	RecA-family ATPase	N/A
KOfam	UHGV-2007928_7	K01160	50.5	0.000000000000058	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2007928_7	phrog_140	101.6	7.8e-30	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2007928_7	UniRef90_UPI00195E3E15	244.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-2007928_7	1235792.C808_05386	215.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-2007928_7	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2007928_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-2007928_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2007928_9	658655.HMPREF0988_00867	63.5	0.0000000000108	N/A	N/A
PHROG	UHGV-2007928_10	phrog_29911	73.8	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-2007928_10	97139.C824_00748	88.6	3.99e-20	N/A	N/A
KOfam	UHGV-2007928_11	K00571	94.4	1.4e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-2007928_11	phrog_23224	199.3	0	DNA methyltransferase	other
UniRef90	UHGV-2007928_11	UniRef90_A0A3E3JY83	501.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-2007928_11	665950.HMPREF1025_02545	358.0	0	DNA methylase	N/A
PADLOC	UHGV-2007928_11	MTase_II_00172	71.4	3.6e-22	Type II methyltransferase	RM
Pfam	UHGV-2007928_11	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-2007928_11	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-2007928_11	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
UniRef90	UHGV-2007928_12	UniRef90_A0A8G1TFU2	81.3	5.53e-17	N/A	N/A
PHROG	UHGV-2007928_13	phrog_15198	45.3	0.000000000000017	N/A	unknown function
UniRef90	UHGV-2007928_13	UniRef90_UPI001915CC67	70.9	0.000000000000133	N/A	N/A
eggNOG-mapper	UHGV-2007928_13	665950.HMPREF1025_02540	51.2	0.0000033	N/A	N/A
Pfam	UHGV-2007928_13	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-2007928_16	UniRef90_UPI00189836E6	231.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-2007928_16	1232452.BAIB02000007_gene1634	216.0	0	N/A	N/A
structural_annotation	UHGV-2007928_16	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_18	phrog_1758	97.9	7.2e-29	acetyltransferase	other
UniRef90	UHGV-2007928_18	UniRef90_A0A239X206	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-2007928_18	1336234.JAGN01000004_gene506	216.0	0	acetyltransferase	N/A
COG	UHGV-2007928_18	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-2007928_18	PF13673,MF_02210,NF000360,COG2153	N/A	N/A	N/A	N/A
KOfam	UHGV-2007928_19	K06223	220.9	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-2007928_19	phrog_56	200.5	0	DNA methyltransferase	other
UniRef90	UHGV-2007928_19	UniRef90_A0A828SZY9	454.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-2007928_19	1232452.BAIB02000007_gene1633	477.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-2007928_19	MTase_II_00039	156.6	0	Type II methyltransferase	RM
Pfam	UHGV-2007928_19	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-2007928_19	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-2007928_19	PF02086,MF_00934,TIGR00571,COG0338	N/A	N/A	N/A	N/A
UniRef90	UHGV-2007928_21	UniRef90_A0A3A6K7U9	57.0	0.00000000206	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-2007928_21	1232452.BAIB02000007_gene1632	124.0	4.42e-37	N/A	N/A
structural_annotation	UHGV-2007928_21	NF008671,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-2007928_22	K07451	51.1	0.000000000000026	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-2007928_22	phrog_119	80.9	1.6e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2007928_22	UniRef90_A0A3E3JY08	177.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2007928_22	1232452.BAIB02000007_gene1631	173.0	0	HNH nucleases	N/A
Pfam	UHGV-2007928_22	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-2007928_22	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-2007928_23	phrog_5110	98.6	3.6e-29	terminase small subunit	head and packaging
UniRef90	UHGV-2007928_23	UniRef90_A0A1C5LZF0	122.0	1.14e-33	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-2007928_23	349161.Dred_2608	84.3	6.9e-20	N/A	N/A
Pfam	UHGV-2007928_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-2007928_23	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_24	phrog_9	262.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-2007928_24	UniRef90_A0A3E3JY25	1135.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-2007928_24	1232452.BAIB02000007_gene1629	769.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-2007928_24	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2007928_24	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2007928_24	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2007928_24	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_25	phrog_12	80.3	1.8e-23	portal protein	head and packaging
UniRef90	UHGV-2007928_25	UniRef90_A0A3E3JY21	759.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2007928_25	1232452.BAIB02000007_gene1627	698.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-2007928_25	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-2007928_25	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2007928_25	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2007928_26	K01358	160.3	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2007928_26	phrog_94	232.9	0	head maturation protease	head and packaging
UniRef90	UHGV-2007928_26	UniRef90_A0A3E3JYT5	447.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-2007928_26	1232452.BAIB02000007_gene1626	443.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-2007928_26	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2007928_26	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2007928_26	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_27	phrog_10	67.3	1.4e-19	major head protein	head and packaging
UniRef90	UHGV-2007928_27	UniRef90_A0A3E3JY53	732.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2007928_27	1232452.BAIB02000007_gene1625	731.0	0	Phage capsid family	N/A
Pfam	UHGV-2007928_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2007928_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2007928_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2007928_27	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_28	phrog_31690	41.7	0.00000000002	N/A	unknown function
eggNOG-mapper	UHGV-2007928_28	1232452.BAIB02000007_gene1624	233.0	0	N/A	N/A
UniRef90	UHGV-2007928_30	UniRef90_A0A844KCF4	136.0	2.76e-39	Phage head closure protein	N/A
structural_annotation	UHGV-2007928_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_31	phrog_78	50.9	0.00000000000003	tail terminator	connector
structural_annotation	UHGV-2007928_31	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_32	phrog_5	45.1	0.0000000000025	tail completion or Neck1 protein	connector
UniRef90	UHGV-2007928_32	UniRef90_D4M595	113.0	2.55e-30	Phage protein, HK97 gp10 family	N/A
PHROG	UHGV-2007928_33	phrog_88	85.8	5.2e-25	major tail protein	tail
UniRef90	UHGV-2007928_33	UniRef90_A0A3E3JYD8	390.0	0	Phage tail protein	N/A
NCBIFam	UHGV-2007928_33	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-2007928_33	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2007928_33	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_36	phrog_23464	235.5	0	N/A	unknown function
UniRef90	UHGV-2007928_36	UniRef90_A0A7G5N113	232.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2007928_36	1232452.BAIB02000007_gene1616	946.0	0	phage tail tape measure protein	N/A
COG	UHGV-2007928_36	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-2007928_37	phrog_33	52.4	0.0000000000000097	distal tail protein Dit	tail
UniRef90	UHGV-2007928_37	UniRef90_A0A844KEE5	227.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2007928_37	1232452.BAIB02000007_gene1615	471.0	0	phage tail	N/A
NCBIFam	UHGV-2007928_37	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-2007928_37	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2007928_37	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_38	phrog_13289	335.5	0	tail protein	tail
UniRef90	UHGV-2007928_38	UniRef90_A0A3E3JY67	1130.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2007928_38	1232452.BAIB02000007_gene1614	1123.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-2007928_38	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2007928_38	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2007928_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2007928_38	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_39	phrog_14030	139.3	1.49995e-41	N/A	unknown function
UniRef90	UHGV-2007928_39	UniRef90_A0A3E3JYD3	656.0	0	Peptidase M23	N/A
eggNOG-mapper	UHGV-2007928_39	1232452.BAIB02000007_gene1613	655.0	0	NlpC/P60 family	N/A
Pfam	UHGV-2007928_39	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-2007928_39	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-2007928_39	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2007928_39	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_40	phrog_819	44.3	0.0000000000013	tail protein	tail
UniRef90	UHGV-2007928_40	UniRef90_UPI000D7A7A43	437.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-2007928_40	290402.Cbei_3387	63.2	0.00000000789	N/A	N/A
Pfam	UHGV-2007928_40	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-2007928_41	phrog_19695	74.0	3.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-2007928_41	1232452.BAIB02000007_gene1611	223.0	0	N/A	N/A
structural_annotation	UHGV-2007928_41	PF19714	N/A	N/A	N/A	N/A
UniRef90	UHGV-2007928_42	UniRef90_UPI001A9BB450	70.5	0.00000000015	collagen-like protein	N/A
eggNOG-mapper	UHGV-2007928_42	1232452.BAIB02000007_gene1610	493.0	0	N/A	N/A
KOfam	UHGV-2007928_43	K16628	70.6	6e-21	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-2007928_43	phrog_819	136.0	2.69999e-40	tail protein	tail
UniRef90	UHGV-2007928_43	UniRef90_UPI00196B7043	131.0	1.04e-36	collagen-like protein	N/A
eggNOG-mapper	UHGV-2007928_43	1232452.BAIB02000007_gene1609	169.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-2007928_43	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2007928_43	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
KOfam	UHGV-2007928_44	K16628	95.7	1.5e-28	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-2007928_44	phrog_819	94.8	8.7e-29	tail protein	tail
UniRef90	UHGV-2007928_44	UniRef90_UPI0006B14F6F	201.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-2007928_44	1232452.BAIB02000007_gene1608	189.0	0	Collagen triple helix repeat	N/A
Pfam	UHGV-2007928_44	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2007928_44	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-2007928_46	1232452.BAIB02000007_gene1607	246.0	0	N/A	N/A
NCBIFam	UHGV-2007928_47	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-2007928_47	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-2007928_48	phrog_1863	57.5	1.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-2007928_48	1232452.BAIB02000007_gene1606	226.0	0	N/A	N/A
eggNOG-mapper	UHGV-2007928_49	1232452.BAIB02000007_gene1605	74.7	5.4e-17	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2007928	Yes	32,194	44	85	1