vOTU vOTU-157277

vOTU: vOTU-157277

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-157277
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00753 → vGENUS-01189 → vOTU-157277
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Flemingibacterium → Flemingibacterium sp900546315
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0184496
Biosample ID	SAMN09781770
Genome length (bp)	23,612 bps
CheckV completeness	59.06% (Medium-quality)
CDS count	35
CDS density	98.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → CAG-272 → Flemingibacterium → Flemingibacterium sp900546315	Total connections	4	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0184496_4	PF01710,NF040595,COG3415	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_5	phrog_111	155.5	0	DNA methyltransferase	other
UniRef90	UHGV-0184496_5	UniRef90_UPI001B999604	189.0	0	adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0184496_5	411468.CLOSCI_00567	187.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0184496_5	oMTase_00015	181.5	0	orphan methyltransferase	RM
Pfam	UHGV-0184496_5	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0184496_5	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0184496_5	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_9	phrog_36	61.7	1.4e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0184496_9	UniRef90_UPI001D05F87A	107.0	2.09e-27	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0184496_9	1235835.C814_01174	100.0	1.24e-25	N/A	N/A
structural_annotation	UHGV-0184496_9	PF07374	N/A	N/A	N/A	N/A
KOfam	UHGV-0184496_10	K07474	139.8	2.70002e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0184496_10	phrog_51	125.4	9.7e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0184496_10	UniRef90_A0A372V657	129.0	1.32e-35	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0184496_10	1321778.HMPREF1982_02686	123.0	1.13e-33	Terminase Small Subunit	N/A
Pfam	UHGV-0184496_10	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0184496_10	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0184496_10	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0184496_11	K06909	84.5	1.3e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0184496_11	phrog_2	100.5	2.7e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0184496_11	UniRef90_UPI00189AB5B3	637.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0184496_11	1304866.K413DRAFT_3034	549.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0184496_11	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0184496_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0184496_11	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_12	phrog_533	330.1	0	portal protein	head and packaging
UniRef90	UHGV-0184496_12	UniRef90_UPI00189C53D6	489.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0184496_12	1304866.K413DRAFT_3035	425.0	0	N/A	N/A
structural_annotation	UHGV-0184496_12	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_13	phrog_581	285.4	0	minor head protein	head and packaging
UniRef90	UHGV-0184496_13	UniRef90_R6SXL7	363.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0184496_13	411461.DORFOR_00748	300.0	0	N/A	N/A
Pfam	UHGV-0184496_13	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0184496_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184496_13	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184496_14	PF21279,NF040942	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_15	phrog_194	106.3	3.3e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0184496_15	UniRef90_A0A2N0ULW9	202.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0184496_15	411461.DORFOR_01166	121.0	3.88e-32	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0184496_15	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0184496_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_16	phrog_422	239.5	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0184496_16	693746.OBV_18090	385.0	0	N/A	N/A
structural_annotation	UHGV-0184496_16	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_17	phrog_541	57.9	1.7e-16	head-tail adaptor	connector
UniRef90	UHGV-0184496_17	UniRef90_A0A371AQT0	82.4	6.58e-18	N/A	N/A
eggNOG-mapper	UHGV-0184496_17	1449050.JNLE01000003_gene3888	73.6	0.00000000000000306	N/A	N/A
eggNOG-mapper	UHGV-0184496_18	1449050.JNLE01000003_gene3887	71.2	0.0000000000000263	N/A	N/A
Pfam	UHGV-0184496_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0184496_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_19	phrog_556	131.5	2.4e-39	minor head protein	head and packaging
UniRef90	UHGV-0184496_19	UniRef90_UPI001B3C5A2B	177.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0184496_19	1449050.JNLE01000003_gene3886	140.0	1.52999e-40	N/A	N/A
Pfam	UHGV-0184496_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0184496_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_20	phrog_3266	85.7	4.3e-25	tail completion	connector
eggNOG-mapper	UHGV-0184496_20	1449050.JNLE01000003_gene3885	112.0	6.98e-30	N/A	N/A
structural_annotation	UHGV-0184496_20	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_21	phrog_3099	155.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0184496_21	1304866.K413DRAFT_3043	194.0	0	N/A	N/A
structural_annotation	UHGV-0184496_21	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_22	phrog_11299	110.9	4.4e-33	N/A	unknown function
eggNOG-mapper	UHGV-0184496_22	1449050.JNLE01000003_gene3883	85.9	1.51e-19	N/A	N/A
structural_annotation	UHGV-0184496_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_23	phrog_706	130.1	1.3e-38	N/A	unknown function
UniRef90	UHGV-0184496_23	UniRef90_UPI001D078E13	178.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0184496_23	1449050.JNLE01000003_gene3882	176.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0184496_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0184496_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_24	phrog_1535	129.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0184496_24	UniRef90_W0U887	355.0	0	Putative minor tail protein	N/A
eggNOG-mapper	UHGV-0184496_24	1160721.RBI_II00528	355.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0184496_24	COG1006	N/A	N/A	Multisubunit Na+/H+ antiporter, MnhC subunit	N/A
eggNOG-mapper	UHGV-0184496_25	693746.OBV_18200	97.1	3.88e-24	N/A	N/A
structural_annotation	UHGV-0184496_25	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_26	phrog_13879	193.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0184496_26	411902.CLOBOL_00124	301.0	0	N/A	N/A
structural_annotation	UHGV-0184496_26	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_27	phrog_18725	59.9	4.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0184496_27	756499.Desde_2424	100.0	9.75e-25	N/A	N/A
UniRef90	UHGV-0184496_30	UniRef90_A0A090I2J2	53.9	0.00000219	Chitin-binding domain of Chi A1-like proteins	N/A
structural_annotation	UHGV-0184496_30	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0184496_31	phrog_4105	78.7	5.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-0184496_31	397288.C806_00056	87.4	7.49e-21	N/A	N/A
PHROG	UHGV-0184496_32	phrog_1419	50.4	0.000000000000013	tail protein	tail
eggNOG-mapper	UHGV-0184496_32	1519439.JPJG01000060_gene1892	81.6	0.000000000000397	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0184496_32	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-0184496_34	K07273	156.9	0	acm; lysozyme	N/A
PHROG	UHGV-0184496_34	phrog_291	133.7	1.6e-39	endolysin	lysis
UniRef90	UHGV-0184496_34	UniRef90_UPI0018A9A1ED	124.0	4.21e-30	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-0184496_34	1120746.CCNL01000010_gene1189	123.0	1.64e-29	lysozyme activity	N/A
Pfam	UHGV-0184496_34	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0184496_34	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0184496_34	PF01183,COG3757	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0184496	Yes	23,612	54	59	1