vOTU vOTU-157470

vOTU: vOTU-157470

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-157470
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00086 → vSUBFAM-00653 → vGENUS-00660 → vOTU-157470
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0389560
Biosample ID	N/A
Genome length (bp)	21,568 bps
CheckV completeness	55.75% (Medium-quality)
CDS count	25
CDS density	93.49%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B durans	Total connections	1	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium	Total connections	1749	Host agreement	90.45

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.75)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0389560_1	K14059	70.1	5.1e-20	int; integrase	N/A
PHROG	UHGV-0389560_1	phrog_1	67.1	3.3e-19	integrase	integration and excision
UniRef90	UHGV-0389560_1	UniRef90_UPI0002829C3C	157.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0389560_1	565664.EFXG_01131	156.0	1.4013e-45	Pfam:Integrase_AP2	N/A
Pfam	UHGV-0389560_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0389560_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
eggNOG-mapper	UHGV-0389560_2	565664.EFXG_02876	140.0	3.68541e-43	N/A	N/A
PHROG	UHGV-0389560_3	phrog_16386	174.3	0	N/A	unknown function
UniRef90	UHGV-0389560_3	UniRef90_UPI0002A2D577	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0389560_3	1104325.M7W_1120	197.0	0	N/A	N/A
Pfam	UHGV-0389560_3	PF19385	N/A	N/A	N/A	DUF5960
structural_annotation	UHGV-0389560_3	PF19385	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_4	phrog_14664	69.0	7.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0389560_4	1302863.I872_00455	105.0	3.2e-26	N/A	N/A
PHROG	UHGV-0389560_6	phrog_21664	81.6	1.1e-23	N/A	unknown function
UniRef90	UHGV-0389560_6	UniRef90_UPI001144CC3B	201.0	0	protein-export chaperone SecB	N/A
eggNOG-mapper	UHGV-0389560_6	1408226.T233_01014	84.7	6.98e-19	Preprotein translocase subunit SecB	N/A
COG	UHGV-0389560_6	COG1952	N/A	N/A	Preprotein translocase subunit SecB	N/A
structural_annotation	UHGV-0389560_6	PF02556,MF_00821,NF004394,COG1952	N/A	N/A	N/A	N/A
KOfam	UHGV-0389560_7	K01447	88.9	7e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0389560_7	phrog_2338	310.2	0	endolysin	lysis
UniRef90	UHGV-0389560_7	UniRef90_A0A377MS14	669.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0389560_7	565664.EFXG_03969	686.0	0	Ami_2	N/A
Pfam	UHGV-0389560_7	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0389560_7	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0389560_7	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_8	phrog_881	118.5	1.6e-35	holin	lysis
UniRef90	UHGV-0389560_8	UniRef90_C9AN11	129.0	6.79e-38	Holin	N/A
eggNOG-mapper	UHGV-0389560_8	768486.EHR_09645	122.0	6.73e-36	Putative phage holin Dp-1	N/A
Pfam	UHGV-0389560_8	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0389560_8	PF16938,COG3237	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_9	phrog_689	98.5	3.5e-29	holin	lysis
UniRef90	UHGV-0389560_9	UniRef90_A0A1L8WAB0	152.0	0	Holin	N/A
eggNOG-mapper	UHGV-0389560_9	1158602.I590_03012	140.0	1.22053e-42	Haemolysin XhlA	N/A
Pfam	UHGV-0389560_9	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
PHROG	UHGV-0389560_10	phrog_9884	908.7	0	N/A	unknown function
UniRef90	UHGV-0389560_10	UniRef90_UPI000CF27EB7	1194.0	0	BppU family phage baseplate upper protein	N/A
eggNOG-mapper	UHGV-0389560_10	768486.EHR_09635	648.0	0	N/A	N/A
Pfam	UHGV-0389560_10	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0389560_11	phrog_1067	445.9	0	minor head protein	head and packaging
UniRef90	UHGV-0389560_11	UniRef90_A0A1L8WAB1	1371.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0389560_11	565664.EFXG_01765	1026.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0389560_11	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0389560_11	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0389560_11	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0389560_11	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_12	phrog_33	64.3	2.6e-18	distal tail protein Dit	tail
UniRef90	UHGV-0389560_12	UniRef90_I6SDW0	484.0	0	Gp13 protein	N/A
eggNOG-mapper	UHGV-0389560_12	565664.EFXG_01766	492.0	0	phage tail	N/A
COG	UHGV-0389560_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0389560_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_13	phrog_58	338.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0389560_13	UniRef90_I6SZA5	1026.0	0	N/A	N/A
eggNOG-mapper	UHGV-0389560_13	565664.EFXG_01767	1131.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0389560_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0389560_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0389560_13	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0389560_13	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_14	phrog_15063	159.6	0	N/A	unknown function
PHROG	UHGV-0389560_15	phrog_5802	134.5	3e-40	N/A	unknown function
eggNOG-mapper	UHGV-0389560_15	565664.EFXG_01769	234.0	0	N/A	N/A
UniRef90	UHGV-0389560_16	UniRef90_A0A828ZRA6	355.0	0	Phage major tail protein B	N/A
eggNOG-mapper	UHGV-0389560_16	768486.EHR_09605	376.0	0	N/A	N/A
structural_annotation	UHGV-0389560_16	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_17	phrog_5509	179.2	0	neck protein	connector
UniRef90	UHGV-0389560_17	UniRef90_I6SDV7	266.0	0	Gp9 protein	N/A
eggNOG-mapper	UHGV-0389560_17	768486.EHR_09600	266.0	0	N/A	N/A
structural_annotation	UHGV-0389560_17	TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_18	phrog_5910	188.2	0	N/A	unknown function
UniRef90	UHGV-0389560_18	UniRef90_I6SZA1	256.0	0	Gp8 protein	N/A
eggNOG-mapper	UHGV-0389560_18	565664.EFXG_01772	259.0	0	N/A	N/A
PHROG	UHGV-0389560_19	phrog_5635	167.5	0	head-tail adaptor	connector
UniRef90	UHGV-0389560_19	UniRef90_A0A133CKL1	233.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0389560_19	565664.EFXG_01773	233.0	0	N/A	N/A
NCBIFam	UHGV-0389560_19	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0389560_19	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_20	phrog_749	97.6	6.7e-29	N/A	unknown function
UniRef90	UHGV-0389560_20	UniRef90_I6S2A8	205.0	0	Gp6 protein	N/A
eggNOG-mapper	UHGV-0389560_20	768486.EHR_09585	205.0	0	N/A	N/A
PHROG	UHGV-0389560_21	phrog_4417	500.3	0	N/A	unknown function
UniRef90	UHGV-0389560_21	UniRef90_A0A0R1JPC3	412.0	0	Conserved bacteriophage protein	N/A
eggNOG-mapper	UHGV-0389560_21	565664.EFXG_01775	610.0	0	N/A	N/A
structural_annotation	UHGV-0389560_21	PF03414,NF041524,COG1442	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_22	phrog_10	164.7	0	major head protein	head and packaging
UniRef90	UHGV-0389560_22	UniRef90_I6SDV1	701.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0389560_22	565664.EFXG_01776	711.0	0	Phage capsid family	N/A
Pfam	UHGV-0389560_22	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0389560_22	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0389560_22	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0389560_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0389560_23	K01358	127.8	1e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0389560_23	phrog_94	217.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0389560_23	UniRef90_A0A132P4D5	426.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0389560_23	565664.EFXG_01777	422.0	0	Clp protease	N/A
Pfam	UHGV-0389560_23	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0389560_23	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0389560_23	PF00574,MF_00444,NF009203,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_24	phrog_12	136.8	1.2e-40	portal protein	head and packaging
UniRef90	UHGV-0389560_24	UniRef90_I6T7N2	741.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0389560_24	768486.EHR_09565	741.0	0	Phage portal protein	N/A
Pfam	UHGV-0389560_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0389560_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0389560_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0389560_24	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0389560_25	phrog_9	291.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0389560_25	UniRef90_A0A132ZDE4	1013.0	0	Phage Terminase	N/A
eggNOG-mapper	UHGV-0389560_25	565664.EFXG_01779	1013.0	0	Phage Terminase	N/A
Pfam	UHGV-0389560_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0389560_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0389560_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0389560_25	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0389560	Yes	21,568	35	56	1