vOTU vOTU-157675

vOTU: vOTU-157675

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-157675
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00116 → vOTU-157675
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0028091
Biosample ID	N/A
Genome length (bp)	28,644 bps
CheckV completeness	67.76% (Medium-quality)
CDS count	60
CDS density	92.47%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	104	Host agreement	96.15
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0028091_1	phrog_1535	119.3	8.80001e-41	tail length tape measure protein	tail
UniRef90	UHGV-0028091_1	UniRef90_A0A290GHN6	98.6	5.55e-21	TMP repeat containing protein	N/A
eggNOG-mapper	UHGV-0028091_1	1235797.C816_04182	223.0	0	SLT domain	N/A
COG	UHGV-0028091_1	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_2	phrog_1194	78.8	6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0028091_2	411902.CLOBOL_00125	117.0	5.52e-32	N/A	N/A
structural_annotation	UHGV-0028091_2	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_3	phrog_13879	241.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0028091_3	1226322.HMPREF1545_00061	360.0	0	N/A	N/A
structural_annotation	UHGV-0028091_3	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_4	phrog_18725	56.9	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0028091_4	1226322.HMPREF1545_00062	84.0	3.46e-18	N/A	N/A
structural_annotation	UHGV-0028091_5	PF09826,MF_03001,TIGR04528,COG2706	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028091_6	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_8	phrog_19111	43.4	0.0000000000024	N/A	unknown function
COG	UHGV-0028091_8	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
UniRef90	UHGV-0028091_9	UniRef90_UPI001C012877	196.0	0	leucine-rich repeat protein	N/A
eggNOG-mapper	UHGV-0028091_9	471875.RUMLAC_02240	120.0	6.71e-27	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-0028091_9	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0028091_9	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028091_9	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_11	1235796.C815_00903	51.2	0.00000755	N/A	N/A
structural_annotation	UHGV-0028091_11	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_14	phrog_13256	62.4	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0028091_14	428125.CLOLEP_01907	73.6	2.22e-16	N/A	N/A
UniRef90	UHGV-0028091_15	UniRef90_H1CEM5	217.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0028091_15	525254.HMPREF0072_1273	207.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0028091_15	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0028091_15	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028091_16	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_17	1304866.K413DRAFT_4686	75.9	1.37e-17	N/A	N/A
eggNOG-mapper	UHGV-0028091_19	1235798.C817_04601	80.9	2.85e-16	N/A	N/A
Pfam	UHGV-0028091_19	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
structural_annotation	UHGV-0028091_19	TIGR03826	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_20	1160721.RBI_I00206	54.3	0.00000000329	N/A	N/A
structural_annotation	UHGV-0028091_20	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_21	phrog_3754	104.1	1.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0028091_21	476272.RUMHYD_01764	165.0	0	N/A	N/A
PHROG	UHGV-0028091_22	phrog_21718	101.8	5.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0028091_22	397290.C810_05210	60.1	0.00000000432	N/A	N/A
PHROG	UHGV-0028091_23	phrog_22984	72.2	3.3e-23	N/A	unknown function
PHROG	UHGV-0028091_24	phrog_16490	161.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0028091_24	1408437.JNJN01000043_gene803	144.0	1.72e-39	N/A	N/A
PHROG	UHGV-0028091_25	phrog_20016	190.1	0	N/A	unknown function
UniRef90	UHGV-0028091_25	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0028091_25	1226322.HMPREF1545_00077	172.0	0	N/A	N/A
structural_annotation	UHGV-0028091_25	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0028091_26	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_27	1226322.HMPREF1545_00079	108.0	3.97e-29	N/A	N/A
KOfam	UHGV-0028091_28	K14059	130.1	2.9e-38	int; integrase	N/A
PHROG	UHGV-0028091_28	phrog_1	139.2	3.69999e-41	integrase	integration and excision
UniRef90	UHGV-0028091_28	UniRef90_UPI00195CC1EE	384.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0028091_28	1235835.C814_03141	196.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0028091_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0028091_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0028091_28	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-0028091_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0028091_29	PF12844	N/A	N/A	N/A	N/A
UniRef90	UHGV-0028091_31	UniRef90_W4QDL7	68.6	0.000000000189	Adhesin_P1_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0028091_31	1298920.KI911353_gene413	136.0	2.45e-37	N/A	N/A
Pfam	UHGV-0028091_31	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
Pfam	UHGV-0028091_31	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
PHROG	UHGV-0028091_35	phrog_8	54.3	5.2e-31	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028091_35	UniRef90_A0A6N7TMW8	64.3	0.00000000234	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0028091_35	1423814.HMPREF0549_1752	67.4	0.0000000000034	Transcriptional regulator, Cro CI family	N/A
Pfam	UHGV-0028091_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028091_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0028091_36	phrog_8	54.9	0.0000000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0028091_36	UniRef90_B8I936	65.1	0.0000000000064	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0028091_36	394503.Ccel_3076	65.1	0.00000000000107	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0028091_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0028091_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0028091_36	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_37	1235835.C814_03153	51.2	0.000000123	N/A	N/A
structural_annotation	UHGV-0028091_37	PF09035,TIGR01764	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0028091_39	760568.Desku_0919	109.0	4.26e-27	N/A	N/A
structural_annotation	UHGV-0028091_39	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_41	phrog_4973	64.9	1.1e-18	N/A	unknown function
UniRef90	UHGV-0028091_41	UniRef90_A0A1W1YSW9	80.9	1.97e-18	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0028091_41	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0028091_41	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_44	phrog_155	156.6	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028091_44	UniRef90_UPI00130EB09C	191.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0028091_44	748224.HMPREF9436_03360	176.0	0	ERF superfamily	N/A
Pfam	UHGV-0028091_44	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0028091_44	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_45	phrog_72	74.1	1.6e-21	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028091_45	UniRef90_A0A8D9PDS2	161.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0028091_45	445972.ANACOL_01825	163.0	0	N/A	N/A
structural_annotation	UHGV-0028091_45	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_46	phrog_7370	57.3	2.6e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028091_46	UniRef90_A0A3D1LDS4	151.0	1.4013e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0028091_46	1123058.KB894266_gene1536	54.7	0.000000266	HNH endonuclease	N/A
Pfam	UHGV-0028091_46	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0028091_46	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0028091_48	K03111	128.6	7.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0028091_48	phrog_44	134.1	9.5e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0028091_48	UniRef90_A0A2V2CEG7	176.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0028091_48	693746.OBV_12860	166.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0028091_48	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0028091_48	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0028091_48	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0028091_48	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0028091_48	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_50	phrog_15768	113.9	2.7e-34	N/A	unknown function
UniRef90	UHGV-0028091_50	UniRef90_A0A4R1QQE6	144.0	2.16e-39	N/A	N/A
eggNOG-mapper	UHGV-0028091_50	203119.Cthe_2466	103.0	2.95e-23	N/A	N/A
AcrCatalog	UHGV-0028091_50	cluster_38323	95.9	4.45e-26	NA	N/A
Pfam	UHGV-0028091_50	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0028091_50	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0028091_53	K00390	102.4	4.6e-30	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0028091_53	phrog_424	118.7	4.9e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0028091_53	UniRef90_UPI001D087498	410.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0028091_53	1408437.JNJN01000032_gene2312	323.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0028091_53	BrxP_00001	68.3	2.4e-20	BrxP	BREX
Pfam	UHGV-0028091_53	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0028091_53	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0028091_53	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_55	phrog_5781	69.7	4.5e-20	N/A	unknown function
UniRef90	UHGV-0028091_55	UniRef90_R5AT00	122.0	3.39e-34	Gp57	N/A
eggNOG-mapper	UHGV-0028091_55	667121.ET1_08_00770	74.3	3.88e-16	N/A	N/A
Pfam	UHGV-0028091_55	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0028091_55	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0028091_55	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_56	phrog_38832	45.6	0.000000000000068	N/A	unknown function
structural_annotation	UHGV-0028091_56	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_57	phrog_599	52.9	0.0000000000000087	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
Pfam	UHGV-0028091_57	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0028091_57	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0028091_57	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0028091_58	phrog_2470	57.5	2.2e-16	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0028091_58	UniRef90_A0A414ZRJ4	126.0	9.31e-36	N/A	N/A
eggNOG-mapper	UHGV-0028091_58	649747.HMPREF0083_06229	53.1	0.000000158	N/A	N/A
Pfam	UHGV-0028091_58	PF11750	N/A	N/A	N/A	DUF3307
structural_annotation	UHGV-0028091_58	PF11750	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0028091	Yes	28,644	53	68	1