vOTU vOTU-157737

vOTU: vOTU-157737

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-157737
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00019 → vGENUS-00849 → vOTU-157737
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1394532
Biosample ID	SAMEA2467008
Genome length (bp)	32,701 bps
CheckV completeness	85.12% (Medium-quality)
CDS count	43
CDS density	94.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	119	Host agreement	98.32
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1394532_1	phrog_674	221.7	0	N/A	unknown function
UniRef90	UHGV-1394532_1	UniRef90_UPI001582FF97	414.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394532_1	1239381.K4JU67_9CAUD	180.0	0	N/A	N/A
Pfam	UHGV-1394532_1	PF07083	N/A	N/A	N/A	DUF1351
KOfam	UHGV-1394532_2	K03111	166.6	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1394532_2	phrog_44	174.8	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394532_2	UniRef90_A0A6A8UB55	308.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1394532_2	264199.stu1753	248.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1394532_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1394532_2	NF005580.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1394532_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1394532_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1394532_2	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1394532_3	K01160	59.1	1.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1394532_3	phrog_140	143.7	6.89439e-43	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394532_3	UniRef90_UPI0015D19E48	295.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1394532_3	112023.Q9MCM0_9CAUD	281.0	0	magnesium ion binding	N/A
Pfam	UHGV-1394532_3	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1394532_3	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_4	phrog_1982	141.0	1.60028e-42	N/A	unknown function
structural_annotation	UHGV-1394532_4	PF01381,NF040507,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394532_5	PF10750,MF_01054,NF001220,COG5515	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_6	phrog_14577	132.0	1.2e-39	N/A	unknown function
structural_annotation	UHGV-1394532_6	PF11305,MF_01360	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_7	phrog_1489	93.2	1.6e-27	N/A	unknown function
UniRef90	UHGV-1394532_7	UniRef90_O34049	75.5	4.47e-17	ORF18	N/A
structural_annotation	UHGV-1394532_7	PF13773	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_9	phrog_121	51.5	0.000000000000017	N/A	unknown function
UniRef90	UHGV-1394532_9	UniRef90_UPI001969AC6C	100.0	8.06e-26	N/A	N/A
eggNOG-mapper	UHGV-1394532_9	365659.smi_0429	81.6	1.79e-18	N/A	N/A
Pfam	UHGV-1394532_9	PF07852	N/A	N/A	N/A	DUF1642
PHROG	UHGV-1394532_10	phrog_1994	220.4	0	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1394532_10	UniRef90_A0A564TRN2	200.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1394532_10	306323.Q56S64_9CAUD	197.0	0	sequence-specific DNA binding	N/A
structural_annotation	UHGV-1394532_10	PF12643,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_11	phrog_884	135.5	1.10001e-40	N/A	unknown function
UniRef90	UHGV-1394532_11	UniRef90_A0A1V0H7R5	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394532_11	365659.smi_0433	55.8	0.00000000667	N/A	N/A
Pfam	UHGV-1394532_11	PF07116	N/A	N/A	N/A	DUF1372
structural_annotation	UHGV-1394532_11	PF07116	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_12	phrog_98	87.8	1.1e-25	N/A	unknown function
UniRef90	UHGV-1394532_12	UniRef90_UPI00069E9839	164.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1394532_12	1000588.HMPREF9965_1710	82.0	1.71e-18	YopX protein	N/A
Pfam	UHGV-1394532_12	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1394532_12	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1394532_12	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_13	phrog_24146	97.5	7.3e-29	N/A	unknown function
PHROG	UHGV-1394532_14	phrog_98	117.8	6e-35	N/A	unknown function
UniRef90	UHGV-1394532_14	UniRef90_UPI0015832B2B	169.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1394532_14	482234.SCAZ3_03630	108.0	1.18e-28	YopX protein	N/A
Pfam	UHGV-1394532_14	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1394532_14	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1394532_14	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_15	phrog_1814	289.6	0	N/A	unknown function
UniRef90	UHGV-1394532_15	UniRef90_UPI001A933801	416.0	0	N/A	N/A
Pfam	UHGV-1394532_15	PF07067	N/A	N/A	N/A	DUF1340
structural_annotation	UHGV-1394532_15	PF07067	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_16	phrog_248	143.2	1.3004e-42	transcriptional activator	transcription regulation
UniRef90	UHGV-1394532_16	UniRef90_A0A286QR68	253.0	0	ArpU late transcriptional regulator	N/A
eggNOG-mapper	UHGV-1394532_16	173707.Q938L8_9CAUD	139.0	1.79e-40	N/A	N/A
NCBIFam	UHGV-1394532_16	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1394532_16	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
KOfam	UHGV-1394532_17	K07474	88.5	1.5e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1394532_17	phrog_51	116.5	1.9e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1394532_17	UniRef90_UPI001BDE0009	336.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1394532_17	1054460.SPPN_00130	210.0	0	DNA packaging	N/A
Pfam	UHGV-1394532_17	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1394532_17	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1394532_17	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1394532_18	K06909	113.2	2.6e-33	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1394532_18	phrog_5653	198.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1394532_18	UniRef90_U6E9B3	811.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1394532_18	73422.L0P509_9CAUD	815.0	0	Terminase-like family	N/A
Pfam	UHGV-1394532_18	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1394532_18	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1394532_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
structural_annotation	UHGV-1394532_18	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_19	phrog_64	458.6	0	portal protein	head and packaging
UniRef90	UHGV-1394532_19	UniRef90_C9W9H5	869.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1394532_19	682370.C9W9H5_9CAUD	869.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1394532_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1394532_19	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1394532_19	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_20	phrog_115	261.8	0	minor head protein	head and packaging
UniRef90	UHGV-1394532_20	UniRef90_A0A2H4J030	554.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1394532_20	1385385.U6E9F1_9CAUD	415.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-1394532_20	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1394532_20	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-1394532_20	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_21	phrog_172	98.5	8e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-1394532_21	UniRef90_O34060	299.0	0	ORF29	N/A
eggNOG-mapper	UHGV-1394532_21	1123315.AUIP01000003_gene242	116.0	7.96e-30	N/A	N/A
Pfam	UHGV-1394532_21	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1394532_21	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_22	phrog_909	97.1	1.2e-28	major head protein	head and packaging
UniRef90	UHGV-1394532_22	UniRef90_A0A2X3UEG8	209.0	0	Phage structural protein	N/A
structural_annotation	UHGV-1394532_22	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_23	phrog_29	261.5	0	major head protein	head and packaging
UniRef90	UHGV-1394532_23	UniRef90_O34062	625.0	0	ORF31	N/A
eggNOG-mapper	UHGV-1394532_23	85154.O34062_BPO12	625.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1394532_23	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1394532_23	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_24	phrog_5279	84.0	9.4e-25	N/A	unknown function
UniRef90	UHGV-1394532_24	UniRef90_O34063	89.0	2.27e-22	ORF32	N/A
PHROG	UHGV-1394532_25	phrog_132	92.3	3.5e-27	head-tail adaptor	connector
UniRef90	UHGV-1394532_25	UniRef90_O34064	208.0	0	ORF33	N/A
eggNOG-mapper	UHGV-1394532_25	1123302.KB904182_gene68	155.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1394532_25	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1394532_25	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_26	phrog_348	89.8	2.4e-26	minor head protein	head and packaging
UniRef90	UHGV-1394532_26	UniRef90_O34065	177.0	0	ORF34	N/A
eggNOG-mapper	UHGV-1394532_26	1605.Lani381_0863	54.3	0.0000000401	N/A	N/A
structural_annotation	UHGV-1394532_26	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_27	phrog_5	67.5	2.9e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-1394532_27	UniRef90_UPI0015D3C8F3	214.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1394532_27	682370.C9W9I3_9CAUD	175.0	0	exonuclease activity	N/A
NCBIFam	UHGV-1394532_27	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1394532_27	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_28	phrog_176	105.2	4.6e-31	tail terminator	connector
UniRef90	UHGV-1394532_28	UniRef90_A0A2X3U795	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394532_28	682370.C9W9I4_9CAUD	241.0	0	N/A	N/A
structural_annotation	UHGV-1394532_28	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_29	phrog_238	175.2	0	major tail protein	tail
UniRef90	UHGV-1394532_29	UniRef90_A0A2X3UI79	292.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1394532_29	1385385.U6E9D4_9CAUD	285.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-1394532_29	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-1394532_29	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-1394532_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_30	phrog_183	91.4	9.9e-27	tail chaperone protein	tail
UniRef90	UHGV-1394532_30	UniRef90_UPI0015D30B22	212.0	0	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-1394532_30	682370.C9W9I6_9CAUD	206.0	0	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-1394532_30	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-1394532_30	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_31	phrog_441	68.5	1.1e-19	tail assembly chaperone	tail
UniRef90	UHGV-1394532_31	UniRef90_O34070	160.0	0	ORF39	N/A
PHROG	UHGV-1394532_32	phrog_1204	1113.4	0	tail protein	tail
UniRef90	UHGV-1394532_32	UniRef90_A0A2H4J016	1328.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1394532_32	85154.O34071_BPO12	966.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1394532_32	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1394532_32	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-1394532_32	TIGR02675.1	N/A	N/A	tape measure protein	N/A
PHROG	UHGV-1394532_33	phrog_202	378.3	0	distal tail protein Dit	tail
UniRef90	UHGV-1394532_33	UniRef90_UPI00189837E2	1032.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1394532_33	78541.O80180_9CAUD	858.0	0	Phage tail protein	N/A
Pfam	UHGV-1394532_33	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1394532_33	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1394532_33	PF05709,PF21708,TIGR01633,NF041449,COG4722,COG3506	N/A	N/A	N/A	N/A
KOfam	UHGV-1394532_34	K16628	43.5	0.0000000000011	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1394532_34	phrog_588	1323.3	0	tail fiber protein and host specificity	tail
UniRef90	UHGV-1394532_34	UniRef90_A0A2H4IZZ5	2663.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-1394532_34	682370.C9W9J0_9CAUD	1176.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1394532_34	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1394532_34	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1394532_34	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
NCBIFam	UHGV-1394532_34	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1394532_34	PF14594,PF00629,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_35	phrog_372	625.3	0	tail protein	tail
UniRef90	UHGV-1394532_35	UniRef90_UPI001898E57A	1302.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394532_35	682370.C9W9J1_9CAUD	734.0	0	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-1394532_35	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1394532_35	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_36	phrog_1060	174.3	0	N/A	unknown function
UniRef90	UHGV-1394532_36	UniRef90_UPI00189C3811	236.0	0	N/A	N/A
Pfam	UHGV-1394532_36	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-1394532_36	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_37	phrog_1567	101.5	3e-30	N/A	unknown function
UniRef90	UHGV-1394532_37	UniRef90_A0A139RNG9	97.1	5.09e-25	N/A	N/A
PHROG	UHGV-1394532_38	phrog_4257	151.1	4.2039e-45	N/A	unknown function
UniRef90	UHGV-1394532_38	UniRef90_A0A1L2JYP2	229.0	0	Transcription termination factor	N/A
eggNOG-mapper	UHGV-1394532_38	1035189.HMPREF9954_0324	186.0	0	N/A	N/A
PHROG	UHGV-1394532_39	phrog_962	70.5	2.7e-20	holin	lysis
UniRef90	UHGV-1394532_39	UniRef90_A0A1V0H822	144.0	1.63952e-43	Phage holin	N/A
eggNOG-mapper	UHGV-1394532_39	888049.HMPREF8578_0250	112.0	1.27e-31	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1394532_39	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1394532_39	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1394532_39	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1394532_39	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_40	phrog_6487	133.7	1.1e-39	N/A	unknown function
UniRef90	UHGV-1394532_40	UniRef90_A0A3S4LRZ3	254.0	0	N/A	N/A
eggNOG-mapper	UHGV-1394532_40	525255.HMPREF0077_1001	54.3	0.00000182	N/A	N/A
Pfam	UHGV-1394532_40	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1394532_40	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1394532_41	phrog_4757	44.8	0.0000000000015	N/A	unknown function
KOfam	UHGV-1394532_43	K07273	103.6	2.4e-30	acm; lysozyme	N/A
PHROG	UHGV-1394532_43	phrog_8577	533.9	0	endolysin	lysis
UniRef90	UHGV-1394532_43	UniRef90_A0A4D6BE28	902.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1394532_43	372457.A7DYC5_9CAUD	303.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1394532_43	PF05257	N/A	N/A	CHAP domain	CHAP
Pfam	UHGV-1394532_43	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
structural_annotation	UHGV-1394532_43	PF01183,PF05257,COG3942	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1394532	Yes	32,701	43	85	1