vOTU vOTU-157931

vOTU: vOTU-157931

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-157931
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00007 → vGENUS-00048 → vOTU-157931
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1432021
Biosample ID	N/A
Genome length (bp)	40,318 bps
CheckV completeness	69.95% (Medium-quality)
CDS count	61
CDS density	84.84%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	485	Host agreement	98.14
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Gemmiger → Gemmiger qucibialis	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-1432021_1	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-1432021_5	UniRef90_A0A2A7B6N3	188.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1432021_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1432021_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1432021_5	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_7	phrog_4402	110.2	1.8e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432021_7	UniRef90_A0A0H5Q331	292.0	0	Rep_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1432021_7	999413.HMPREF1094_04438	122.0	7.13e-29	Initiator Replication protein	N/A
Pfam	UHGV-1432021_7	PF01051	N/A	N/A	Initiator Replication protein, WH1	Rep3_N
Pfam	UHGV-1432021_7	PF21205	N/A	N/A	Initiator Rep protein, WH2	Rep3_C
COG	UHGV-1432021_7	COG5527	N/A	N/A	Protein involved in initiation of plasmid replication	N/A
structural_annotation	UHGV-1432021_7	PF01051,PF21205,NF038290,COG5527	N/A	N/A	N/A	N/A
Pfam	UHGV-1432021_8	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1432021_8	NF041588	N/A	N/A	N/A	N/A
KOfam	UHGV-1432021_9	K03496	236.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1432021_9	phrog_164	162.7	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432021_9	UniRef90_A0A1C6BS15	213.0	0	Sporulation initiation inhibitor protein soj	N/A
eggNOG-mapper	UHGV-1432021_9	1408423.JHYA01000021_gene392	190.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-1432021_9	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1432021_9	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1432021_9	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_11	PF07878	N/A	N/A	N/A	N/A
KOfam	UHGV-1432021_12	K13525	129.3	1.4e-38	VCP, CDC48; transitional endoplasmic reticulum ATPase	N/A
PHROG	UHGV-1432021_12	phrog_3757	202.8	0	N/A	unknown function
UniRef90	UHGV-1432021_12	UniRef90_A0A4Z0Y6M2	356.0	0	ATP-dependent zinc metalloprotease FtsH 3	N/A
eggNOG-mapper	UHGV-1432021_12	768710.DesyoDRAFT_1087	211.0	0	ATPase family associated with various cellular activities (AAA)	N/A
PADLOC	UHGV-1432021_12	IetA_00002	187.9	0	NA	ietAS
Pfam	UHGV-1432021_12	PF00004	N/A	N/A	ATPase family associated with various cellular activities (AAA)	AAA
COG	UHGV-1432021_12	COG0464	N/A	N/A	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	N/A
structural_annotation	UHGV-1432021_12	PF00004,MF_00553,TIGR01242,COG1222	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1432021_14	1415774.U728_1699	117.0	8.59e-32	N/A	N/A
eggNOG-mapper	UHGV-1432021_15	1408437.JNJN01000043_gene801	87.0	2.04e-18	N/A	N/A
eggNOG-mapper	UHGV-1432021_16	1408437.JNJN01000043_gene802	121.0	4.52e-34	N/A	N/A
PHROG	UHGV-1432021_17	phrog_16490	99.5	5.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-1432021_17	1408437.JNJN01000043_gene803	157.0	3.36312e-44	N/A	N/A
PHROG	UHGV-1432021_19	phrog_21718	42.6	0.0000000000085	N/A	unknown function
PHROG	UHGV-1432021_21	phrog_15303	77.4	1.5e-22	N/A	unknown function
PHROG	UHGV-1432021_22	phrog_1863	79.6	1.9e-23	N/A	unknown function
eggNOG-mapper	UHGV-1432021_22	718252.FP2_04900	147.0	1.4013e-45	N/A	N/A
KOfam	UHGV-1432021_23	K07273	163.5	0	acm; lysozyme	N/A
PHROG	UHGV-1432021_23	phrog_291	115.8	3.9e-34	endolysin	lysis
UniRef90	UHGV-1432021_23	UniRef90_A0A564U0D3	465.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1432021_23	718252.FP2_04890	251.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1432021_23	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1432021_23	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1432021_23	PF01183,NF003812,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432021_24	UniRef90_UPI001D07AB37	90.1	9.02e-23	XkdX family protein	N/A
eggNOG-mapper	UHGV-1432021_24	718252.FP2_16990	87.8	1.25e-22	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1432021_24	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
structural_annotation	UHGV-1432021_24	PF09693	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_26	phrog_10993	149.4	1.4013e-45	Hoc-like head decoration	head and packaging
UniRef90	UHGV-1432021_26	UniRef90_A0A1Q6KPN8	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1432021_26	748224.HMPREF9436_01181	181.0	0	N/A	N/A
structural_annotation	UHGV-1432021_26	PF19789,PF18911	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_28	phrog_18725	45.8	2.1e-17	N/A	unknown function
UniRef90	UHGV-1432021_28	UniRef90_UPI001D0EF571	198.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1432021_28	718252.FP2_14370	244.0	0	domain, Protein	N/A
COG	UHGV-1432021_28	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_28	PF15417,NF041539	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_29	phrog_13879	230.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1432021_29	1007103.AFHW01000096_gene3259	127.0	1.32e-28	N/A	N/A
Pfam	UHGV-1432021_29	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-1432021_29	PF14594,PF19789,PF03256,PF09134,NF033848,COG3500,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_30	phrog_1194	84.0	1.2e-24	N/A	unknown function
Pfam	UHGV-1432021_30	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1432021_30	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_31	phrog_1535	175.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1432021_31	1121866.AUGK01000003_gene1437	186.0	5.60519e-45	phage tail tape measure protein	N/A
COG	UHGV-1432021_31	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
eggNOG-mapper	UHGV-1432021_32	1121333.JMLH01000047_gene1011	77.0	4.02e-16	N/A	N/A
UniRef90	UHGV-1432021_33	UniRef90_A0A847YX95	71.6	0.000000000000072	N/A	N/A
eggNOG-mapper	UHGV-1432021_33	1123263.AUKY01000015_gene1618	62.4	0.0000000000488	N/A	N/A
Pfam	UHGV-1432021_33	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1432021_33	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_34	phrog_158	43.5	0.0000000000049	major tail protein	tail
UniRef90	UHGV-1432021_34	UniRef90_UPI001D087591	117.0	4.36e-31	phage tail protein	N/A
eggNOG-mapper	UHGV-1432021_34	1449343.JQLQ01000002_gene1514	55.8	0.000000106	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1432021_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_35	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1432021_37	1298920.KI911353_gene2656	53.1	0.000000439	N/A	N/A
structural_annotation	UHGV-1432021_37	PF19586,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432021_38	UniRef90_R6N215	82.0	5.26e-18	Phage QLRG family putative DNA packaging	N/A
structural_annotation	UHGV-1432021_38	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_39	phrog_29	171.4	0	major head protein	head and packaging
UniRef90	UHGV-1432021_39	UniRef90_A0A7X5DZ98	342.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1432021_39	476272.RUMHYD_01946	233.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1432021_39	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1432021_39	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432021_42	UniRef90_UPI0018A09237	71.2	0.000000000000117	N/A	N/A
eggNOG-mapper	UHGV-1432021_42	397290.C810_05229	69.3	0.000000000000125	N/A	N/A
structural_annotation	UHGV-1432021_42	PF14359,NF040588,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_43	phrog_64	149.5	1.54143e-44	portal protein	head and packaging
UniRef90	UHGV-1432021_43	UniRef90_A0A371ILT4	332.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1432021_43	1121866.AUGK01000003_gene1429	284.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1432021_43	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1432021_43	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_45	phrog_38	175.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1432021_45	UniRef90_UPI000419A6BC	431.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1432021_45	1121866.AUGK01000003_gene1428	431.0	0	chromosome segregation	N/A
COG	UHGV-1432021_45	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_45	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_47	NF009949	N/A	N/A	N/A	N/A
KOfam	UHGV-1432021_49	K14060	95.4	7.2e-28	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-1432021_49	phrog_125	130.6	1e-38	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1432021_49	UniRef90_UPI001A9B5A42	243.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1432021_49	1443122.Z958_05795	161.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1432021_49	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-1432021_49	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1432021_49	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-1432021_50	UniRef90_A0A417DZ16	52.4	0.000000241	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-1432021_50	PF20075,TIGR02612,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1432021_52	PF19807,NF041793,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-1432021_53	K07741	89.3	5.9e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-1432021_53	phrog_373	133.0	2.3e-39	anti-repressor	transcription regulation
UniRef90	UHGV-1432021_53	UniRef90_UPI001C039A6C	172.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1432021_53	903814.ELI_3141	141.0	2.68e-38	AntA/AntB antirepressor	N/A
Pfam	UHGV-1432021_53	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1432021_53	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1432021_53	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1432021_53	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1432021_55	phrog_14275	59.1	5.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1432021_55	1280676.AUJO01000001_gene2313	66.6	0.000000000239	N/A	N/A
Pfam	UHGV-1432021_55	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
structural_annotation	UHGV-1432021_55	PF13157,MF_01537,NF007875,COG3123	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1432021	Yes	40,318	49	70	1