vOTU vOTU-158710

vOTU: vOTU-158710

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-158710
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00077 → vGENUS-00252 → vOTU-158710
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0185028
Biosample ID	SAMN09781756
Genome length (bp)	20,265 bps
CheckV completeness	53.52% (Medium-quality)
CDS count	27
CDS density	94.54%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	59	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Dysosmobacter → Dysosmobacter sp001916835	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.52)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0185028_1	phrog_21498	259.6	0	N/A	unknown function
UniRef90	UHGV-0185028_1	UniRef90_C7MM70	289.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0185028_1	469378.Ccur_02830	289.0	0	DNA binding	N/A
PADLOC	UHGV-0185028_1	MTase_II_00015	113.9	1.8e-33	Type II methyltransferase	RM
Pfam	UHGV-0185028_1	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0185028_1	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0185028_1	PF02195,MF_02015,TIGR04285,TIGR01712,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_2	phrog_83	89.1	5.2e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0185028_2	UniRef90_UPI001EDE2A13	239.0	0	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0185028_2	1007096.BAGW01000012_gene2373	147.0	6.474e-43	Phage terminase, small subunit	N/A
Pfam	UHGV-0185028_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0185028_2	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0185028_2	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0185028_2	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_3	phrog_9	325.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0185028_3	UniRef90_A0A845R4S1	917.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0185028_3	742738.HMPREF9460_00872	795.0	0	Phage Terminase	N/A
Pfam	UHGV-0185028_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0185028_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0185028_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0185028_3	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_5	phrog_12	257.9	0	portal protein	head and packaging
UniRef90	UHGV-0185028_5	UniRef90_UPI001958B72F	582.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0185028_5	1007103.AFHW01000142_gene1297	181.0	0	Phage portal protein	N/A
Pfam	UHGV-0185028_5	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0185028_5	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0185028_5	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0185028_5	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0185028_6	K01358	106.5	3.5e-31	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0185028_6	phrog_94	195.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0185028_6	UniRef90_UPI00124513AA	297.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0185028_6	557436.Lreu_1115	145.0	7.98e-40	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0185028_6	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0185028_6	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0185028_6	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_7	phrog_10	89.6	4.3e-26	major head protein	head and packaging
UniRef90	UHGV-0185028_7	UniRef90_UPI000B37FFEF	483.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0185028_7	742740.HMPREF9474_04304	183.0	0	Phage capsid family	N/A
Pfam	UHGV-0185028_7	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0185028_7	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0185028_7	PF05065,PF14182,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0185028_8	UniRef90_UPI0010315EA4	105.0	2.82e-27	phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0185028_8	742738.HMPREF9460_00878	101.0	2.28e-26	N/A	N/A
NCBIFam	UHGV-0185028_8	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0185028_8	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_9	phrog_25	56.1	6.7e-16	head closure Hc1	connector
UniRef90	UHGV-0185028_9	UniRef90_UPI001898DBDF	99.4	8.46e-25	phage head closure protein	N/A
Pfam	UHGV-0185028_9	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0185028_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0185028_9	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0185028_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0185028_10	UniRef90_UPI00102FC317	58.5	0.0000000107	phage tail protein	N/A
eggNOG-mapper	UHGV-0185028_10	1203606.HMPREF1526_00975	74.3	0.00000000000000121	N/A	N/A
structural_annotation	UHGV-0185028_10	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0185028_11	1203606.HMPREF1526_00974	92.4	9.71e-22	N/A	N/A
structural_annotation	UHGV-0185028_11	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_12	phrog_88	51.5	0.000000000000018	major tail protein	tail
UniRef90	UHGV-0185028_12	UniRef90_R5EB96	191.0	0	Phage major tail protein phi13 family	N/A
structural_annotation	UHGV-0185028_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_14	phrog_23464	231.3	0	N/A	unknown function
UniRef90	UHGV-0185028_14	UniRef90_UPI00189782F4	156.0	2.29e-36	phage tail protein	N/A
eggNOG-mapper	UHGV-0185028_14	33035.JPJF01000023_gene3232	229.0	0	phage tail tape measure protein	N/A
COG	UHGV-0185028_14	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0185028_14	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_16	phrog_32744	618.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0185028_16	1232449.BAHV02000010_gene2725	95.1	1.81e-17	N/A	N/A
structural_annotation	UHGV-0185028_16	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0185028_18	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_19	phrog_31538	45.3	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0185028_19	428125.CLOLEP_01433	49.7	0.00000121	N/A	N/A
PHROG	UHGV-0185028_20	phrog_13589	154.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0185028_20	742733.HMPREF9469_05009	191.0	0	N/A	N/A
UniRef90	UHGV-0185028_21	UniRef90_A0A411ZUM8	184.0	0	Leucine-rich repeat domain-containing protein	N/A
Pfam	UHGV-0185028_21	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-0185028_21	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
structural_annotation	UHGV-0185028_21	PF13306,NF041351	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0185028_22	1235797.C816_04174	196.0	0	N/A	N/A
PHROG	UHGV-0185028_23	phrog_1863	62.1	5.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0185028_23	748224.HMPREF9436_00408	95.1	6.86e-25	N/A	N/A
PHROG	UHGV-0185028_24	phrog_1129	63.0	3.6e-18	holin	lysis
UniRef90	UHGV-0185028_24	UniRef90_UPI001C0F421C	134.0	1.97e-39	phage holin family protein	N/A
eggNOG-mapper	UHGV-0185028_24	1226322.HMPREF1545_00069	129.0	6.21e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0185028_24	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0185028_24	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0185028_26	phrog_21357	80.7	1.6e-23	endolysin	lysis
UniRef90	UHGV-0185028_26	UniRef90_UPI001C00DA69	258.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0185028_26	1007096.BAGW01000017_gene816	139.0	9.41e-39	CHAP domain	N/A
Pfam	UHGV-0185028_26	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0185028_26	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0185028_26	PF06672,TIGR02594,COG4322	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0185028	Yes	20,265	61	54	1