vOTU vOTU-158955

vOTU: vOTU-158955

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-158955
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00136 → vGENUS-00514 → vOTU-158955
Host lineage	Bacteria → Firmicutes_A → Clostridia
Host range breadth	Class
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0187009
Biosample ID	N/A
Genome length (bp)	36,244 bps
CheckV completeness	79.92% (Medium-quality)
CDS count	55
CDS density	92.89%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	7	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	7	Host agreement	71.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.92)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0187009_1	phrog_434	44.2	0.0000000000029	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187009_1	UniRef90_R6N9M4	355.0	0	Phage-related protein predicted endonuclease	N/A
eggNOG-mapper	UHGV-0187009_1	1219626.HMPREF1639_07320	187.0	0	YqaJ viral recombinase family	N/A
COG	UHGV-0187009_1	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0187009_3	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_4	phrog_18716	151.7	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0187009_4	UniRef90_A0A7X7HJW5	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0187009_4	1029718.SFBM_0379	129.0	4.37e-36	N/A	N/A
Pfam	UHGV-0187009_4	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0187009_4	PF18909	N/A	N/A	N/A	N/A
KOfam	UHGV-0187009_5	K03698	42.5	0.0000000000091	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	N/A
PHROG	UHGV-0187009_5	phrog_28876	106.4	2.4e-31	metal-dependent phosphohydrolase	other
UniRef90	UHGV-0187009_5	UniRef90_A0A1C6EYG8	262.0	0	Predicted HD-superfamily hydrolase	N/A
eggNOG-mapper	UHGV-0187009_5	1219626.HMPREF1639_07345	165.0	0	metal-dependent phosphohydrolase, HD sub domain	N/A
COG	UHGV-0187009_5	COG3481	N/A	N/A	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	N/A
structural_annotation	UHGV-0187009_5	PF21447,MF_01427,NF010007,COG3481	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187009_8	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_9	phrog_1829	158.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187009_9	UniRef90_R6P545	457.0	0	Primase C terminal 1 (PriCT-1)./Bifunctional DNA primase/polymerase N-terminal	N/A
eggNOG-mapper	UHGV-0187009_9	1121866.AUGK01000003_gene1409	208.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-0187009_9	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-0187009_9	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-0187009_9	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_10	phrog_7024	75.9	2.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0187009_10	1410624.JNKK01000017_gene1963	67.4	0.0000000000000299	N/A	N/A
AcrCatalog	UHGV-0187009_10	cluster_1398	67.4	1.25e-18	NA	N/A
KOfam	UHGV-0187009_11	K07171	91.3	1.4e-26	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0187009_11	phrog_1936	140.7	6.60012e-42	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0187009_11	UniRef90_A0A1C6L030	147.0	2.51953e-42	mRNA interferase EndoA	N/A
eggNOG-mapper	UHGV-0187009_11	411483.FAEPRAA2165_01880	120.0	1.7e-32	N/A	N/A
Pfam	UHGV-0187009_11	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0187009_11	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0187009_11	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_12	phrog_6721	264.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0187009_12	428125.CLOLEP_01387	290.0	0	N/A	N/A
structural_annotation	UHGV-0187009_12	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_14	phrog_1156	305.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187009_14	UniRef90_R6NFT7	924.0	0	Phage/plasmid primase P4 family C-terminal domain	N/A
eggNOG-mapper	UHGV-0187009_14	649747.HMPREF0083_00553	293.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-0187009_14	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0187009_14	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0187009_14	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0187009_14	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0187009_14	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0187009_14	PF08706,PF05272,PF02257,MF_04000,NF005477,COG3378	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187009_18	PF06289,COG1582	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_19	phrog_1233	57.0	3.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0187009_19	476272.RUMHYD_02850	61.6	0.0000000000542	N/A	N/A
structural_annotation	UHGV-0187009_19	PF13058	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187009_22	UniRef90_UPI001C012D23	112.0	1.47e-27	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0187009_22	1415774.U728_1676	56.2	0.000000126	DNA-packaging protein gp3	N/A
structural_annotation	UHGV-0187009_22	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_23	phrog_4264	69.2	4.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0187009_23	1406785.U5PTP9_9CAUD	52.4	0.000000202	N/A	N/A
PHROG	UHGV-0187009_25	phrog_17101	41.2	0.000000000019	N/A	unknown function
PHROG	UHGV-0187009_27	phrog_6244	55.2	0.0000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0187009_27	1354300.AUQY01000005_gene215	115.0	8.92e-33	N/A	N/A
PHROG	UHGV-0187009_28	phrog_1373	41.3	0.000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187009_28	UniRef90_A0A1C6L0N3	113.0	1.74e-31	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0187009_28	1235800.C819_01469	111.0	1.64e-31	N/A	N/A
Pfam	UHGV-0187009_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0187009_28	PF20075,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0187009_29	K14060	139.0	4.30002e-41	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0187009_29	phrog_125	174.2	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187009_29	UniRef90_R6N9Q2	283.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-0187009_29	1378168.N510_00035	216.0	0	resolvase	N/A
Pfam	UHGV-0187009_29	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0187009_29	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0187009_29	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_31	phrog_38	195.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0187009_31	UniRef90_A0A810QA10	666.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0187009_31	1298920.KI911353_gene2682	474.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-0187009_31	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0187009_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187009_31	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_32	phrog_64	241.3	0	portal protein	head and packaging
UniRef90	UHGV-0187009_32	UniRef90_R6P563	794.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0187009_32	1121866.AUGK01000003_gene1429	445.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0187009_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0187009_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_34	phrog_544	52.3	0.0000000000000039	major head protein	head and packaging
eggNOG-mapper	UHGV-0187009_34	428127.EUBDOL_01555	257.0	0	N/A	N/A
structural_annotation	UHGV-0187009_34	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_35	phrog_3673	69.3	3.5e-20	Arc-like repressor	transcription regulation
UniRef90	UHGV-0187009_35	UniRef90_A0A7S8CBU7	68.9	0.0000000000000707	Termination factor Rho	N/A
eggNOG-mapper	UHGV-0187009_35	491915.Aflv_0665	60.5	0.0000000000251	N/A	N/A
UniRef90	UHGV-0187009_36	UniRef90_R6N215	177.0	0	Phage QLRG family putative DNA packaging	N/A
eggNOG-mapper	UHGV-0187009_36	1298920.KI911353_gene2658	50.4	0.00000143	N/A	N/A
Pfam	UHGV-0187009_36	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0187009_36	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187009_37	1121866.AUGK01000003_gene1432	85.9	9.95e-20	N/A	N/A
UniRef90	UHGV-0187009_38	UniRef90_UPI001BBD4500	68.6	0.0000000000245	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0187009_38	1298920.KI911353_gene2654	71.6	0.000000000000349	N/A	N/A
eggNOG-mapper	UHGV-0187009_39	1121333.JMLH01000047_gene1014	53.1	0.000000643	N/A	N/A
structural_annotation	UHGV-0187009_39	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_40	phrog_158	60.3	4e-17	major tail protein	tail
UniRef90	UHGV-0187009_40	UniRef90_A0A1C6L0H9	224.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0187009_40	1232453.BAIF02000058_gene1634	100.0	2e-25	N/A	N/A
structural_annotation	UHGV-0187009_40	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187009_41	UniRef90_A0A1C0ADY7	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-0187009_41	469596.HMPREF9488_01311	95.5	3.99e-24	N/A	N/A
Pfam	UHGV-0187009_41	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0187009_41	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187009_42	1121333.JMLH01000047_gene1011	80.5	2.18e-17	N/A	N/A
PHROG	UHGV-0187009_43	phrog_1535	174.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0187009_43	UniRef90_A0A318EME6	139.0	3.13e-29	Phage-related protein	N/A
eggNOG-mapper	UHGV-0187009_43	1121866.AUGK01000003_gene1437	304.0	0	phage tail tape measure protein	N/A
COG	UHGV-0187009_43	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0187009_44	phrog_1194	86.3	2.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-0187009_44	742740.HMPREF9474_03515	121.0	5.24e-34	N/A	N/A
structural_annotation	UHGV-0187009_44	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_45	phrog_13879	277.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0187009_45	1235800.C819_00474	483.0	0	N/A	N/A
structural_annotation	UHGV-0187009_45	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_46	phrog_18725	62.2	9.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0187009_46	585501.HMPREF6123_0822	100.0	2.97e-25	N/A	N/A
PHROG	UHGV-0187009_47	phrog_1220	40.8	0.00000000003	head protein	head and packaging
PHROG	UHGV-0187009_48	phrog_5302	251.1	0	tail protein	tail
UniRef90	UHGV-0187009_48	UniRef90_R6M197	189.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0187009_48	665950.HMPREF1025_01337	137.0	3.72e-31	Phage tail-collar fibre protein	N/A
COG	UHGV-0187009_48	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0187009_48	PF07210,PF13620,PF16893,NF040788,COG2512	N/A	N/A	N/A	N/A
KOfam	UHGV-0187009_49	K00986	157.2	0	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0187009_49	phrog_1423	220.5	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187009_49	UniRef90_A0A849CV99	543.0	0	RNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0187009_49	411470.RUMGNA_00249	192.0	0	COG COG3344 Retron-type reverse transcriptase	N/A
PADLOC	UHGV-0187009_49	icity0040	119.0	8.7e-35	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0187009_49	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0187009_49	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0187009_49	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_51	phrog_18593	52.4	0.00000000000001	N/A	unknown function
UniRef90	UHGV-0187009_51	UniRef90_A0A521IRB0	119.0	1.51e-31	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0187009_51	994573.T472_0212005	110.0	3.36e-28	N/A	N/A
Pfam	UHGV-0187009_51	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0187009_51	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_52	phrog_37604	99.0	4.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0187009_52	457412.RSAG_01109	97.1	3.35e-23	N/A	N/A
KOfam	UHGV-0187009_53	K01447	76.2	5.4e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0187009_53	phrog_1794	248.5	0	amidase	lysis
UniRef90	UHGV-0187009_53	UniRef90_A0A849CVD3	445.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0187009_53	908340.HMPREF9406_0181	333.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
AcrCatalog	UHGV-0187009_53	cluster_53013	80.1	1.48e-19	NA	N/A
Pfam	UHGV-0187009_53	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0187009_53	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0187009_53	PF01510,PF18342,MF_04111,NF008758,COG3023,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0187009_54	phrog_17876	89.5	3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0187009_54	411483.FAEPRAA2165_01926	77.4	5.2e-17	N/A	N/A
PHROG	UHGV-0187009_55	phrog_6918	106.8	1.1e-31	holin	lysis
UniRef90	UHGV-0187009_55	UniRef90_A0A849CVA3	137.0	3.93e-40	Holin	N/A
eggNOG-mapper	UHGV-0187009_55	1297617.JPJD01000020_gene301	105.0	2.38e-28	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0187009_55	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-0187009_55	TIGR01673.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0187009_55	PF09682,TIGR01673	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0187009	Yes	36,244	48	80	1
UHGV-1400627	No	36,244	48	80	1