vOTU vOTU-159434

vOTU: vOTU-159434

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-159434
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-02479 → vOTU-159434
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203593
Biosample ID	SAMN10290207
Genome length (bp)	20,590 bps
CheckV completeness	59.62% (Medium-quality)
CDS count	29
CDS density	89.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0203593_1	phrog_15768	51.5	0.00000000000002	N/A	unknown function
Pfam	UHGV-0203593_1	PF19808	N/A	N/A	N/A	DUF6291
KOfam	UHGV-0203593_2	K03111	157.9	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0203593_2	phrog_44	164.8	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0203593_2	UniRef90_A0A136Q1B8	207.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0203593_2	1392491.JIAE01000001_gene2290	154.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0203593_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0203593_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0203593_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0203593_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0203593_2	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203593_3	UniRef90_A0A357NGS2	97.4	1.98e-22	HTH_11 domain-containing protein	N/A
structural_annotation	UHGV-0203593_3	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0203593_4	phrog_398	177.7	0	N/A	unknown function
UniRef90	UHGV-0203593_4	UniRef90_UPI0018C6CD3B	240.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0203593_4	1485543.JMME01000021_gene802	221.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0203593_4	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0203593_4	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0203593_5	phrog_659	191.1	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0203593_5	UniRef90_UPI001E5A6693	213.0	0	N/A	N/A
eggNOG-mapper	UHGV-0203593_5	1507.HMPREF0262_00431	197.0	0	N/A	N/A
Pfam	UHGV-0203593_5	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0203593_5	PF06378,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203593_8	PF10711,TIGR03433	N/A	N/A	N/A	N/A
UniRef90	UHGV-0203593_12	UniRef90_UPI00156F727A	64.3	0.00000000000409	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0203593_12	1507.HMPREF0262_00305	56.6	0.000000000637	sequence-specific DNA binding	N/A
Pfam	UHGV-0203593_12	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0203593_12	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0203593_13	UniRef90_A0A3D0PN06	403.0	0	ISLre2 family transposase	N/A
eggNOG-mapper	UHGV-0203593_13	1042156.CXIVA_06920	337.0	0	PFAM Uncharacterised protein family UPF0236	N/A
Pfam	UHGV-0203593_13	PF06782	N/A	N/A	Uncharacterised protein family (UPF0236)	UPF0236
NCBIFam	UHGV-0203593_13	NF033529.1	N/A	N/A	ISLre2 family transposase	N/A
Pfam	UHGV-0203593_14	PF03869	N/A	N/A	Arc-like DNA binding domain	Arc
PHROG	UHGV-0203593_15	phrog_16230	61.0	2.2e-17	replication protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0203593_15	UniRef90_E6TVF7	122.0	6.36e-32	Phage P1-related protein	N/A
eggNOG-mapper	UHGV-0203593_15	511680.BUTYVIB_02144	224.0	0	N/A	N/A
PHROG	UHGV-0203593_16	phrog_1129	61.7	8.7e-18	holin	lysis
UniRef90	UHGV-0203593_16	UniRef90_A0A358ASD1	108.0	8.02e-29	Holin	N/A
eggNOG-mapper	UHGV-0203593_16	1410668.JNKC01000001_gene1676	99.0	4.57e-26	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0203593_16	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0203593_16	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0203593_17	K01448	180.1	0	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0203593_17	phrog_435	163.1	0	endolysin	lysis
UniRef90	UHGV-0203593_17	UniRef90_UPI00104CF88A	281.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0203593_17	573061.Clocel_2169	136.0	3.93e-36	N-acetylmuramoyl-L-alanine amidase, peptidoglycan hydrolase, LytC amidase family	N/A
Pfam	UHGV-0203593_17	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0203593_17	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0203593_17	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
KOfam	UHGV-0203593_22	K16628	181.2	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0203593_22	phrog_5073	79.8	0	tail fiber protein	tail
eggNOG-mapper	UHGV-0203593_22	1519439.JPJG01000060_gene1892	58.9	0.00000484	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0203593_22	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0203593_22	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
UniRef90	UHGV-0203593_23	UniRef90_R6EKZ3	71.2	0.000000000105	Putative phage protein	N/A
structural_annotation	UHGV-0203593_23	PF16774,PF21766,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0203593_24	phrog_23464	213.4	0	N/A	unknown function
UniRef90	UHGV-0203593_24	UniRef90_A0A0M2NN26	108.0	3.16e-20	Phage tail length tape-measure protein	N/A
eggNOG-mapper	UHGV-0203593_24	926561.KB900622_gene636	257.0	0	phage tail tape measure protein	N/A
COG	UHGV-0203593_24	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0203593_24	COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0203593_26	phrog_709	95.7	3.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0203593_26	1111134.HMPREF1253_0376	70.5	0.000000000000133	N/A	N/A
structural_annotation	UHGV-0203593_26	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0203593_28	phrog_88	167.5	0	major tail protein	tail
UniRef90	UHGV-0203593_28	UniRef90_A0A1I7JV20	249.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0203593_28	1408311.JNJM01000036_gene51	229.0	0	phage major tail protein, phi13 family	N/A
Pfam	UHGV-0203593_28	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0203593_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0203593_28	PF06488,PF18316,TIGR01603,COG3498	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0203593	Yes	20,590	47	60	1