vOTU vOTU-159601

vOTU: vOTU-159601

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-159601
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-02072 → vGENUS-02383 → vOTU-159601
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1523476
Biosample ID	N/A
Genome length (bp)	34,845 bps
CheckV completeness	78.03% (Medium-quality)
CDS count	53
CDS density	94.83%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	114	Host agreement	85.96
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	14	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-1523476_1	COG0417	N/A	N/A	DNA polymerase B elongation subunit	N/A
PHROG	UHGV-1523476_2	phrog_155	70.6	2.5e-20	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1523476_2	UniRef90_D7GQK5	176.0	0	ERF superfamily	N/A
Pfam	UHGV-1523476_2	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1523476_2	PF04404	N/A	N/A	N/A	N/A
COG	UHGV-1523476_3	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
PHROG	UHGV-1523476_4	phrog_434	93.2	2.9e-27	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1523476_4	UniRef90_H1CES3	462.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1523476_4	1219626.HMPREF1639_07320	350.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1523476_4	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
COG	UHGV-1523476_4	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1523476_4	PF09588,TIGR03033,COG5377	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1523476_6	PF05037,NF005674	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_7	phrog_18716	159.4	0	N/A	unknown function
UniRef90	UHGV-1523476_7	UniRef90_A0A7X7HJW5	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-1523476_7	665959.HMPREF1013_00856	129.0	2.07e-36	N/A	N/A
Pfam	UHGV-1523476_7	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
PHROG	UHGV-1523476_9	phrog_1829	137.4	7.50003e-41	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1523476_9	UniRef90_H1CER3	319.0	0	PriCT_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1523476_9	1121866.AUGK01000003_gene1409	215.0	0	Phage plasmid primase, P4 family domain protein	N/A
Pfam	UHGV-1523476_9	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
COG	UHGV-1523476_9	COG4983	N/A	N/A	Primase-polymerase (Primpol) domain protein	N/A
structural_annotation	UHGV-1523476_9	PF08708,PF09250,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_11	phrog_6721	160.1	0	N/A	unknown function
UniRef90	UHGV-1523476_11	UniRef90_A0A373Q5P7	519.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1523476_11	537007.BLAHAN_05521	204.0	0	N/A	N/A
PADLOC	UHGV-1523476_11	HEase_00016	43.2	0.0000000000084	homing endonuclease	RM
Pfam	UHGV-1523476_11	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1523476_11	PF02796,PF07463,TIGR02170	N/A	N/A	N/A	N/A
KOfam	UHGV-1523476_15	K17398	77.5	2.8e-33	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-1523476_15	phrog_17284	145.9	0	N/A	unknown function
UniRef90	UHGV-1523476_15	UniRef90_A0A350XVB1	418.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1523476_15	1203606.HMPREF1526_01874	383.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-1523476_15	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1523476_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1523476_15	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1523476_17	1120998.AUFC01000030_gene2222	55.8	0.0000001	N/A	N/A
PHROG	UHGV-1523476_18	phrog_10714	49.2	0.000000000000087	N/A	unknown function
eggNOG-mapper	UHGV-1523476_18	1120998.AUFC01000030_gene2222	50.8	0.000000347	N/A	N/A
KOfam	UHGV-1523476_20	K01160	58.7	1.7e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1523476_20	phrog_34	65.9	6.6e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1523476_20	UniRef90_UPI00131A3D1F	149.0	6.02558e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1523476_20	1567011.A0A0A7S133_9VIRU	53.5	0.000000325	Endodeoxyribonuclease RusA	N/A
structural_annotation	UHGV-1523476_20	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_22	phrog_1156	271.0	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1523476_22	UniRef90_UPI00164E4416	282.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1523476_22	862517.HMPREF9225_1259	275.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1523476_22	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1523476_22	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1523476_22	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1523476_22	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1523476_22	PF08706,PF05272,PF02257,MF_00016,NF005477,COG3378	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_23	phrog_606	41.7	0.000000000012	terminase small subunit	head and packaging
UniRef90	UHGV-1523476_23	UniRef90_UPI001D08D6B6	156.0	2.8026e-45	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1523476_23	485915.Dret_1613	52.4	0.00000459	DNA-packaging protein gp3	N/A
Pfam	UHGV-1523476_23	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1523476_23	PF16677	N/A	N/A	N/A	N/A
KOfam	UHGV-1523476_24	K03466	178.5	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1523476_24	phrog_1358	170.6	0	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1523476_24	UniRef90_A0A1C5UE43	193.0	0	Stage III sporulation protein E	N/A
eggNOG-mapper	UHGV-1523476_24	1340493.JNIF01000003_gene2347	125.0	5.36e-30	PFAM cell divisionFtsK SpoIIIE	N/A
PADLOC	UHGV-1523476_24	SspH_00004	71.0	1.1e-20	SspH	SSP
Pfam	UHGV-1523476_24	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1523476_24	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-1523476_24	PF01580,MF_00350,TIGR03925,COG0433	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_26	phrog_4534	65.1	1.2e-18	N/A	unknown function
KOfam	UHGV-1523476_27	K06400	209.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1523476_27	phrog_95	195.8	0	integrase	integration and excision
UniRef90	UHGV-1523476_27	UniRef90_A0A3D4G6V8	263.0	0	Resolvase	N/A
eggNOG-mapper	UHGV-1523476_27	697329.Rumal_3466	218.0	0	resolvase	N/A
Pfam	UHGV-1523476_27	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1523476_27	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-1523476_27	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1523476_27	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_30	phrog_1233	80.7	2.1e-23	N/A	unknown function
UniRef90	UHGV-1523476_30	UniRef90_UPI001C39EFB9	95.5	4.36e-23	Dienelactone hydrolase family protein	N/A
eggNOG-mapper	UHGV-1523476_30	357809.Cphy_2967	102.0	1.58e-26	N/A	N/A
PHROG	UHGV-1523476_31	phrog_38	197.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1523476_31	UniRef90_A0A318EQM2	473.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-1523476_31	1123263.AUKY01000015_gene1608	548.0	0	chromosome segregation	N/A
COG	UHGV-1523476_31	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1523476_31	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_32	phrog_64	230.9	0	portal protein	head and packaging
UniRef90	UHGV-1523476_32	UniRef90_A0A6I2QXE1	531.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1523476_32	1121866.AUGK01000003_gene1429	397.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1523476_32	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1523476_32	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
Pfam	UHGV-1523476_33	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
structural_annotation	UHGV-1523476_33	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_35	phrog_1328	118.7	3.7e-35	major head protein	head and packaging
UniRef90	UHGV-1523476_35	UniRef90_UPI00164DD2D5	515.0	0	N/A	N/A
eggNOG-mapper	UHGV-1523476_35	665956.HMPREF1032_03619	222.0	0	N/A	N/A
Pfam	UHGV-1523476_35	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1523476_35	PF17236,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1523476_36	UniRef90_UPI001898B4B4	128.0	2.84e-36	phage head-tail connector protein	N/A
Pfam	UHGV-1523476_36	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1523476_36	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1523476_37	1298920.KI911353_gene2656	90.9	1.01e-21	N/A	N/A
eggNOG-mapper	UHGV-1523476_38	476272.RUMHYD_01963	67.0	0.0000000000181	N/A	N/A
structural_annotation	UHGV-1523476_39	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_40	phrog_158	51.6	0.000000000000017	major tail protein	tail
UniRef90	UHGV-1523476_40	UniRef90_UPI00189AB4AD	181.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1523476_40	1158607.UAU_01767	71.6	0.0000000000000794	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-1523476_40	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1523476_41	UniRef90_A0A847YX95	112.0	5.28e-30	N/A	N/A
eggNOG-mapper	UHGV-1523476_41	1211844.CBLM010000023_gene988	82.0	8.31e-19	N/A	N/A
Pfam	UHGV-1523476_41	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1523476_41	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1523476_42	1121333.JMLH01000047_gene1011	63.9	0.000000000038	N/A	N/A
PHROG	UHGV-1523476_43	phrog_1535	58.8	2.1e-20	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1523476_43	445971.ANASTE_00086	85.1	0.0000000000000341	phage tail tape measure protein	N/A
COG	UHGV-1523476_43	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1523476_44	phrog_1194	99.6	2e-29	N/A	unknown function
UniRef90	UHGV-1523476_44	UniRef90_A0A0R1VMM5	80.5	4.28e-17	N/A	N/A
eggNOG-mapper	UHGV-1523476_44	60520.HR47_13415	84.7	1.58e-19	N/A	N/A
Pfam	UHGV-1523476_44	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1523476_44	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_45	phrog_6616	565.3	0	tail protein	tail
UniRef90	UHGV-1523476_45	UniRef90_A0A0J1FXD9	140.0	5.17e-31	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1523476_45	1294142.CINTURNW_1042	73.6	0.000000000201	Phage minor structural protein	N/A
COG	UHGV-1523476_45	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1523476_45	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1523476_47	PF10651,NF009453	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1523476_48	PF02973	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_50	phrog_27545	95.3	6.5e-28	N/A	unknown function
UniRef90	UHGV-1523476_50	UniRef90_D1PRE7	105.0	2.6e-26	Glycosyl hydrolase, family 18 family protein	N/A
eggNOG-mapper	UHGV-1523476_50	411471.SUBVAR_06976	105.0	4.37e-27	N/A	N/A
Pfam	UHGV-1523476_50	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-1523476_51	K01448	120.7	1.5e-35	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1523476_51	phrog_435	142.9	2.90069e-42	endolysin	lysis
UniRef90	UHGV-1523476_51	UniRef90_R6HWJ2	625.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1523476_51	1203606.HMPREF1526_00346	116.0	3.8e-28	Ami_3	N/A
Pfam	UHGV-1523476_51	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1523476_51	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1523476_51	PF01520,PF15591,MF_00562,TIGR02883,NF033202,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1523476_52	phrog_1863	77.4	9.4e-23	N/A	unknown function
UniRef90	UHGV-1523476_52	UniRef90_A0A2K9NYV1	85.1	3.18e-20	Holin	N/A
eggNOG-mapper	UHGV-1523476_52	428125.CLOLEP_01781	89.7	6.92e-23	N/A	N/A
PHROG	UHGV-1523476_53	phrog_263	72.4	3.9e-21	holin	lysis
UniRef90	UHGV-1523476_53	UniRef90_R6ITV1	184.0	0	Phage lysis protein holin	N/A
eggNOG-mapper	UHGV-1523476_53	1158607.UAU_01779	58.9	0.000000000384	SPP1 phage holin	N/A
Pfam	UHGV-1523476_53	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
structural_annotation	UHGV-1523476_53	PF04688,TIGR01592	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1523476	Yes	34,845	46	78	1
UHGV-0102123	No	34,843	46	78	1