vOTU vOTU-160702

vOTU: vOTU-160702

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-160702
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-00089 → vOTU-160702
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1887092
Biosample ID	N/A
Genome length (bp)	27,217 bps
CheckV completeness	64.98% (Medium-quality)
CDS count	35
CDS density	93.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	137	Host agreement	94.16
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp002404795	Total connections	21	Host agreement	76.19

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1887092_3	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-1887092_8	K22300	58.5	1.6e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1887092_8	phrog_8	49.0	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1887092_8	UniRef90_A0A844DFR0	119.0	5.46e-32	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1887092_8	748224.HMPREF9436_01444	115.0	2.91e-31	N/A	N/A
Pfam	UHGV-1887092_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1887092_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1887092_8	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1887092_9	471855.Shel_04260	62.8	0.0000000606	dextransucrase activity	N/A
COG	UHGV-1887092_9	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
Pfam	UHGV-1887092_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1887092_11	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1887092_12	K14059	206.8	0	int; integrase	N/A
PHROG	UHGV-1887092_12	phrog_1	198.0	0	integrase	integration and excision
UniRef90	UHGV-1887092_12	UniRef90_A0A8F2JBJ7	253.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-1887092_12	1507.HMPREF0262_00307	200.0	0	Phage integrase family	N/A
Pfam	UHGV-1887092_12	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1887092_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1887092_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1887092_12	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1887092_13	UniRef90_A0A8F0WD75	79.7	0.00000000000000148	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1887092_13	1378168.N510_03079	70.9	0.00000000000153	N/A	N/A
KOfam	UHGV-1887092_16	K19167	109.0	6.1e-32	abiQ; protein AbiQ	N/A
PHROG	UHGV-1887092_16	phrog_9764	116.2	2.5e-34	N/A	unknown function
UniRef90	UHGV-1887092_16	UniRef90_A0A845R8D8	214.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-1887092_16	1519439.JPJG01000060_gene1906	177.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-1887092_16	AbiQ	134.3	1.4e-39	AbiQ	Abi
Pfam	UHGV-1887092_16	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-1887092_16	PF13958	N/A	N/A	N/A	N/A
PHROG	UHGV-1887092_18	phrog_14030	135.5	3.60001e-40	N/A	unknown function
UniRef90	UHGV-1887092_18	UniRef90_R6LL81	234.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1887092_18	1121866.AUGK01000003_gene1444	94.7	1.47e-19	amidase activity	N/A
COG	UHGV-1887092_18	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-1887092_19	phrog_6918	95.4	3.9e-28	holin	lysis
UniRef90	UHGV-1887092_19	UniRef90_A0A316QCY7	101.0	9.93e-26	Holin	N/A
eggNOG-mapper	UHGV-1887092_19	1297617.JPJD01000020_gene301	99.8	6.94e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1887092_19	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1887092_19	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1887092_21	1232443.BAIA02000106_gene3111	48.9	0.00000932	N/A	N/A
PHROG	UHGV-1887092_23	phrog_37900	73.0	3.5e-23	N/A	unknown function
UniRef90	UHGV-1887092_23	UniRef90_R5IRZ6	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-1887092_23	1519439.JPJG01000060_gene1894	206.0	0	N/A	N/A
Pfam	UHGV-1887092_23	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1887092_23	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1887092_23	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
KOfam	UHGV-1887092_24	K16628	181.8	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1887092_24	phrog_819	99.8	0	tail protein	tail
eggNOG-mapper	UHGV-1887092_24	1519439.JPJG01000060_gene1892	80.5	0.000000000000321	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1887092_24	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1887092_24	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1887092_25	PF18962,NF011773	N/A	N/A	N/A	N/A
PHROG	UHGV-1887092_26	phrog_33872	58.9	9.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1887092_26	693746.OBV_19740	54.7	0.0000000177	N/A	N/A
PHROG	UHGV-1887092_27	phrog_22978	126.2	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-1887092_27	1232449.BAHV02000016_gene1805	422.0	0	N/A	N/A
Pfam	UHGV-1887092_27	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
UniRef90	UHGV-1887092_28	UniRef90_R5DCX9	189.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1887092_28	1410650.JHWL01000003_gene2815	137.0	1.09e-33	N/A	N/A
PHROG	UHGV-1887092_29	phrog_12105	121.9	3.6e-36	N/A	unknown function
eggNOG-mapper	UHGV-1887092_29	1226322.HMPREF1545_03850	59.7	0.00000000112	N/A	N/A
PHROG	UHGV-1887092_31	phrog_1357	211.9	0	major head protein	head and packaging
UniRef90	UHGV-1887092_31	UniRef90_A0A2V2CFL5	392.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1887092_31	1410650.JHWL01000003_gene2830	282.0	0	N/A	N/A
Pfam	UHGV-1887092_31	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1887092_31	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1887092_31	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1887092_32	phrog_13908	122.4	3.9e-36	N/A	unknown function
eggNOG-mapper	UHGV-1887092_32	1410650.JHWL01000003_gene2831	80.1	0.00000000000000444	N/A	N/A
PHROG	UHGV-1887092_33	phrog_156	128.7	3.5e-38	portal protein	head and packaging
eggNOG-mapper	UHGV-1887092_33	1410650.JHWL01000003_gene2833	288.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1887092	Yes	27,217	58	65	1