vOTU vOTU-161804

vOTU: vOTU-161804

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-161804
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00383 → vGENUS-11473 → vOTU-161804
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1482594
Biosample ID	SAMEA2042621
Genome length (bp)	36,815 bps
CheckV completeness	62.58% (Medium-quality)
CDS count	56
CDS density	90.86%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	441	Host agreement	99.09
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira rogosae_A	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1482594_1	397290.C810_01402	73.6	0.00000000000000312	N/A	N/A
PHROG	UHGV-1482594_2	phrog_4105	90.3	1.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-1482594_2	97139.C824_05951	150.0	0	N/A	N/A
PHROG	UHGV-1482594_3	phrog_1129	81.3	6.9e-24	holin	lysis
UniRef90	UHGV-1482594_3	UniRef90_A0A8D9UII9	150.0	1.4013e-45	Holin	N/A
eggNOG-mapper	UHGV-1482594_3	411461.DORFOR_00721	102.0	1.88e-27	N/A	N/A
Pfam	UHGV-1482594_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1482594_3	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1482594_4	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482594_5	UniRef90_UPI001BBD4500	149.0	1.32002e-42	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1482594_5	397290.C810_01411	198.0	0	N/A	N/A
structural_annotation	UHGV-1482594_5	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1482594_6	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1482594_7	476272.RUMHYD_01968	189.0	0	N/A	N/A
structural_annotation	UHGV-1482594_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_8	phrog_36112	54.5	9e-16	N/A	unknown function
UniRef90	UHGV-1482594_8	UniRef90_A0A8D9PG71	138.0	7.69e-39	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1482594_8	1298920.KI911353_gene2651	96.3	3.88e-23	N/A	N/A
structural_annotation	UHGV-1482594_8	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_9	phrog_1204	137.9	5.29999e-41	tail protein	tail
UniRef90	UHGV-1482594_9	UniRef90_A0A8D9PGP0	354.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-1482594_9	1298920.KI911353_gene2649	137.0	2.47e-32	tape measure	N/A
COG	UHGV-1482594_9	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1482594_9	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_10	phrog_1204	168.2	0	tail protein	tail
eggNOG-mapper	UHGV-1482594_10	1298920.KI911353_gene2649	127.0	1.34e-26	tape measure	N/A
COG	UHGV-1482594_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1482594_11	phrog_2657	213.7	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1482594_11	UniRef90_R7BHB1	350.0	0	Phage regulatory protein Rha family	N/A
eggNOG-mapper	UHGV-1482594_11	33035.JPJF01000043_gene993	281.0	0	N/A	N/A
Pfam	UHGV-1482594_11	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1482594_11	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1482594_11	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1482594_11	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1482594_13	1336241.JAEB01000004_gene513	145.0	6.59003e-41	N/A	N/A
structural_annotation	UHGV-1482594_13	PF07233,NF038353,COG5633	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_15	phrog_4608	137.5	1.10001e-40	anti-repressor	transcription regulation
UniRef90	UHGV-1482594_15	UniRef90_R7BIG3	321.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_15	658655.HMPREF0988_00907	207.0	0	ORF6N domain	N/A
Pfam	UHGV-1482594_15	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-1482594_15	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1482594_16	K19304	105.9	4.7e-31	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-1482594_16	phrog_6700	72.7	1.6e-21	endolysin	lysis
UniRef90	UHGV-1482594_16	UniRef90_R7BGI7	360.0	0	LysM domain/M23/M37 peptidase domain protein	N/A
eggNOG-mapper	UHGV-1482594_16	1094508.Tsac_0868	97.1	6.76e-21	PFAM Peptidase M23	N/A
Pfam	UHGV-1482594_16	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
Pfam	UHGV-1482594_16	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1482594_16	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-1482594_16	PF01551,PF05036,MF_02022,NF040883,NF008641,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_17	phrog_1194	69.5	4.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-1482594_17	483218.BACPEC_01144	73.2	0.0000000000000117	N/A	N/A
Pfam	UHGV-1482594_17	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1482594_17	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_18	phrog_18190	892.0	0	N/A	unknown function
UniRef90	UHGV-1482594_18	UniRef90_R7BGL9	1229.0	0	N/A	N/A
eggNOG-mapper	UHGV-1482594_18	1235790.C805_00089	420.0	0	N/A	N/A
structural_annotation	UHGV-1482594_18	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_19	phrog_17196	123.0	2.8e-36	kinase	other
UniRef90	UHGV-1482594_19	UniRef90_A0A3R6GQJ1	398.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_19	483218.BACPEC_01141	177.0	1.4013e-44	N/A	N/A
KOfam	UHGV-1482594_21	K18830	69.2	2.1e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1482594_21	phrog_4	56.9	4.7e-16	transcriptional repressor	transcription regulation
UniRef90	UHGV-1482594_21	UniRef90_R7BIH5	233.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1482594_21	445972.ANACOL_03315	129.0	2.59e-37	N/A	N/A
Pfam	UHGV-1482594_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1482594_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1482594_21	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_22	phrog_2657	159.8	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1482594_22	UniRef90_R7BGJ4	443.0	0	Phage regulatory protein rha family	N/A
eggNOG-mapper	UHGV-1482594_22	411459.RUMOBE_01391	290.0	0	N/A	N/A
Pfam	UHGV-1482594_22	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1482594_22	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1482594_22	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1482594_22	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1482594_25	K07741	56.1	0.000000000000001	antB; anti-repressor protein	N/A
PHROG	UHGV-1482594_25	phrog_22529	202.6	0	N/A	unknown function
UniRef90	UHGV-1482594_25	UniRef90_R7BII5	439.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_25	397290.C810_01343	235.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1482594_25	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1482594_25	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-1482594_25	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
KOfam	UHGV-1482594_27	K19171	103.4	2.2e-30	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1482594_27	phrog_77	183.5	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_27	UniRef90_R7BHE4	826.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1482594_27	1232453.BAIF02000057_gene1134	279.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1482594_27	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1482594_27	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_29	phrog_2185	300.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_29	UniRef90_UPI001BC46C39	492.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1482594_29	658655.HMPREF0988_00886	374.0	0	N/A	N/A
structural_annotation	UHGV-1482594_29	NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_31	phrog_25456	113.9	5.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-1482594_32	411470.RUMGNA_02035	65.5	0.000000000000135	N/A	N/A
KOfam	UHGV-1482594_33	K06167	45.3	0.00000000000052	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-1482594_33	phrog_392	182.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-1482594_33	UniRef90_A0A412RQX2	364.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1482594_33	1443122.Z958_05735	175.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-1482594_33	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-1482594_33	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1482594_33	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_39	phrog_7545	144.0	3.79752e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_39	UniRef90_R7BGM2	371.0	0	Gp148	N/A
eggNOG-mapper	UHGV-1482594_39	864702.OsccyDRAFT_0645	66.2	0.0000000000543	HNH endonuclease	N/A
Pfam	UHGV-1482594_39	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1482594_39	PF13392,PF13384,TIGR04381,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1482594_40	K03111	120.9	1.7e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1482594_40	phrog_44	129.6	2.4e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_40	UniRef90_R7BIL2	251.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1482594_40	511680.BUTYVIB_00906	182.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1482594_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1482594_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1482594_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1482594_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1482594_40	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1482594_42	PF14282	N/A	N/A	N/A	N/A
UniRef90	UHGV-1482594_44	UniRef90_R7BIL7	68.9	0.000000000000811	Putative DNA topoisomerase I	N/A
eggNOG-mapper	UHGV-1482594_44	1235800.C819_02246	62.8	0.000000000209	N/A	N/A
PHROG	UHGV-1482594_45	phrog_599	41.2	0.000000000033	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1482594_45	UniRef90_UPI001BDB849B	50.8	0.000000409	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1482594_45	220341.16503116	46.6	0.00000346	Toxic component of a type I toxin-antitoxin (TA) system. Upon overexpression inhibits growth and reduces colony-forming units in both the presence and absence of the Rac prophage, cells become filamentous. Has deoxyribonuclease activity (probably endonucleolytic), does not digest RNA. Its toxic effects are neutralized by sRNA antitoxin RalA, which is encoded in trans on the opposite DNA strand. Has RAL-like activity	N/A
Pfam	UHGV-1482594_45	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-1482594_45	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1482594_45	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_46	phrog_20593	67.0	2.6e-19	N/A	unknown function
PHROG	UHGV-1482594_47	phrog_874	165.6	0	N/A	unknown function
UniRef90	UHGV-1482594_47	UniRef90_A0A4P6LRJ9	186.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_47	411468.CLOSCI_00298	178.0	0	N/A	N/A
structural_annotation	UHGV-1482594_47	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_48	phrog_8684	102.5	1.6e-30	N/A	unknown function
UniRef90	UHGV-1482594_48	UniRef90_A0A416AFR1	159.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_48	742733.HMPREF9469_00912	135.0	5.45e-39	YopX protein	N/A
Pfam	UHGV-1482594_48	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1482594_48	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1482594_48	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_49	phrog_7545	116.4	9.1e-35	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_49	UniRef90_R7BGM2	272.0	0	Gp148	N/A
eggNOG-mapper	UHGV-1482594_49	864702.OsccyDRAFT_0645	65.9	0.0000000000706	HNH endonuclease	N/A
Pfam	UHGV-1482594_49	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1482594_49	PF13392,PF13384,TIGR04381,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-1482594_50	K03111	85.2	1.3e-24	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1482594_50	phrog_44	97.5	1.8e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_50	UniRef90_A0A412RR48	219.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1482594_50	397290.C810_01495	166.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1482594_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1482594_50	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1482594_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1482594_50	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-1482594_51	K00390	41.7	0.00000000000056	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1482594_51	phrog_424	90.3	5e-27	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1482594_51	UniRef90_A0A412RQR2	399.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_51	1280696.ATVY01000096_gene1971	225.0	0	N/A	N/A
Pfam	UHGV-1482594_51	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1482594_51	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1482594_51	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_52	phrog_19106	234.2	0	N/A	unknown function
UniRef90	UHGV-1482594_52	UniRef90_R6RVQ6	204.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-1482594_52	658655.HMPREF0988_00875	164.0	0	N/A	N/A
PHROG	UHGV-1482594_53	phrog_3458	46.4	0.00000000000042	N/A	unknown function
KOfam	UHGV-1482594_54	K00571	111.6	9.1e-33	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1482594_54	phrog_67	94.6	4.3e-28	DNA methyltransferase	other
UniRef90	UHGV-1482594_54	UniRef90_UPI001C399578	516.0	0	Site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1482594_54	658655.HMPREF0988_00878	495.0	0	DNA methylase	N/A
PADLOC	UHGV-1482594_54	MTase_II_00157	92.9	4.6e-27	Type II methyltransferase	RM
Pfam	UHGV-1482594_54	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1482594_54	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1482594_54	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1482594_56	phrog_8489	190.7	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1482594_56	UniRef90_UPI000AB3B1F8	150.0	1.64933e-42	replisome organizer	N/A
eggNOG-mapper	UHGV-1482594_56	1415774.U728_867	144.0	5.27999e-40	DnaD domain protein	N/A
COG	UHGV-1482594_56	COG3935	N/A	N/A	DNA replication protein DnaD	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1482594	Yes	36,815	41	63	1