vOTU vOTU-162393

vOTU: vOTU-162393

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162393
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00014 → vGENUS-10055 → vOTU-162393
Host lineage
Host range breadth
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0189449
Biosample ID	SAMN09781770
Genome length (bp)	32,013 bps
CheckV completeness	51.47% (Medium-quality)
CDS count	41
CDS density	93.79%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0189449_1	phrog_4338	273.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0189449_1	411460.RUMTOR_01339	267.0	0	N/A	N/A
PHROG	UHGV-0189449_2	phrog_1129	75.1	5.8e-22	holin	lysis
UniRef90	UHGV-0189449_2	UniRef90_A0A1C7FPV3	129.0	2.03e-37	Enolase	N/A
eggNOG-mapper	UHGV-0189449_2	1226322.HMPREF1545_00069	132.0	3.1e-39	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0189449_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0189449_2	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0189449_3	K01447	55.7	0.000000000000001	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0189449_3	phrog_7698	165.2	0	endolysin	lysis
UniRef90	UHGV-0189449_3	UniRef90_A0A845RD28	302.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0189449_3	1203606.HMPREF1526_01931	255.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0189449_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0189449_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0189449_3	PF01510,PF18342,MF_04111,NF008758,COG3023,COG4991	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189449_4	UniRef90_UPI001D0673C2	188.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0189449_4	478749.BRYFOR_08514	182.0	0	N/A	N/A
structural_annotation	UHGV-0189449_4	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_5	phrog_4372	948.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0189449_5	UniRef90_G5IHN3	1223.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0189449_5	742733.HMPREF9469_05020	1239.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0189449_5	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0189449_5	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0189449_5	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0189449_5	PF20155,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189449_6	UniRef90_UPI001C38AC7F	752.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0189449_6	478749.BRYFOR_08512	665.0	0	Fibronectin type 3 domain	N/A
Pfam	UHGV-0189449_6	PF00041	N/A	N/A	Fibronectin type III domain	fn3
structural_annotation	UHGV-0189449_6	PF06995,PF02010,PF18001,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_7	phrog_1887	52.2	0.0000000000000071	tail protein	tail
UniRef90	UHGV-0189449_7	UniRef90_UPI001C38532D	450.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0189449_7	478749.BRYFOR_08511	426.0	0	N/A	N/A
structural_annotation	UHGV-0189449_7	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189449_8	UniRef90_UPI001D009058	102.0	1.28e-21	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0189449_8	478749.BRYFOR_08510	76.3	0.0000000000018	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0189449_8	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0189449_9	phrog_37329	58.5	7.1e-17	N/A	unknown function
UniRef90	UHGV-0189449_9	UniRef90_UPI001C5692ED	102.0	2.12e-23	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0189449_9	1395587.P364_0113810	75.1	0.000000000000321	Fibronectin type 3 domain	N/A
COG	UHGV-0189449_9	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0189449_9	PF17166,NF038367,COG2033	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0189449_11	478749.BRYFOR_08557	57.4	0.00000791	N/A	N/A
Pfam	UHGV-0189449_11	PF19079	N/A	N/A	Collagen-flanked surface repeat	CFSR
PHROG	UHGV-0189449_12	phrog_18185	53.5	0.0000000000000031	tail fiber protein	tail
eggNOG-mapper	UHGV-0189449_12	665956.HMPREF1032_02937	62.8	0.0000000201	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-0189449_12	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0189449_13	NF012201	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189449_14	PF14870,MF_01282,NF000096,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189449_15	PF14870,MF_01282,NF000096,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_16	phrog_7389	88.8	1.4e-27	tail fiber protein	tail
UniRef90	UHGV-0189449_16	UniRef90_UPI001F4DB85A	100.0	3.3e-20	pyocin knob domain-containing protein	N/A
UniRef90	UHGV-0189449_17	UniRef90_UPI001956F1E1	107.0	4.53e-28	branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0189449_17	411463.EUBVEN_00420	100.0	4.12e-26	N/A	N/A
KOfam	UHGV-0189449_21	K06400	269.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0189449_21	phrog_95	270.8	0	integrase	integration and excision
UniRef90	UHGV-0189449_21	UniRef90_UPI001C11D960	320.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0189449_21	411470.RUMGNA_02175	258.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0189449_21	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0189449_21	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0189449_21	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0189449_22	K22300	63.4	4.8e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0189449_22	phrog_8	58.4	1.6e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0189449_22	UniRef90_C5EPX3	83.2	4.74e-18	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0189449_22	457421.CBFG_03225	83.2	7.94e-19	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0189449_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0189449_22	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0189449_22	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_24	phrog_11237	160.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0189449_24	742733.HMPREF9469_05093	159.0	0	N/A	N/A
structural_annotation	UHGV-0189449_25	PF07011,NF038178	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_27	phrog_15866	116.7	1.5e-34	N/A	unknown function
eggNOG-mapper	UHGV-0189449_27	428125.CLOLEP_01351	57.4	0.00000000959	N/A	N/A
PHROG	UHGV-0189449_28	phrog_17256	223.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0189449_28	742733.HMPREF9469_05087	201.0	0	N/A	N/A
PHROG	UHGV-0189449_29	phrog_18243	60.5	2.3e-17	N/A	unknown function
UniRef90	UHGV-0189449_29	UniRef90_A0A4D7AY04	57.8	0.00000000183	CTP synthase	N/A
eggNOG-mapper	UHGV-0189449_29	428125.CLOLEP_01356	58.2	0.000000000465	N/A	N/A
PHROG	UHGV-0189449_30	phrog_2152	227.4	0	N/A	unknown function
UniRef90	UHGV-0189449_30	UniRef90_UPI001956236B	192.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189449_30	742740.HMPREF9474_02318	194.0	0	N/A	N/A
Pfam	UHGV-0189449_30	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0189449_30	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_32	phrog_2152	261.9	0	N/A	unknown function
UniRef90	UHGV-0189449_32	UniRef90_UPI0011CA98EE	257.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189449_32	742740.HMPREF9474_02314	271.0	0	N/A	N/A
Pfam	UHGV-0189449_32	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0189449_32	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_33	phrog_18141	40.7	0.000000000025	N/A	unknown function
PHROG	UHGV-0189449_34	phrog_4079	199.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0189449_34	742733.HMPREF9469_05076	187.0	0	N/A	N/A
PHROG	UHGV-0189449_35	phrog_2152	338.0	0	N/A	unknown function
UniRef90	UHGV-0189449_35	UniRef90_UPI00156DA7B3	364.0	0	N/A	N/A
eggNOG-mapper	UHGV-0189449_35	411460.RUMTOR_02029	351.0	0	N/A	N/A
Pfam	UHGV-0189449_35	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0189449_35	PF19880	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189449_36	PF12728,TIGR01764	N/A	N/A	N/A	N/A
PHROG	UHGV-0189449_37	phrog_14968	61.3	9.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0189449_37	742733.HMPREF9469_05071	59.3	0.0000000000259	N/A	N/A
PHROG	UHGV-0189449_38	phrog_4695	159.2	0	N/A	unknown function
UniRef90	UHGV-0189449_38	UniRef90_UPI001D08D232	128.0	1.02e-33	YtxH domain-containing protein	N/A
eggNOG-mapper	UHGV-0189449_38	411460.RUMTOR_02032	159.0	0	N/A	N/A
PHROG	UHGV-0189449_39	phrog_4678	207.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0189449_39	428125.CLOLEP_01372	218.0	0	N/A	N/A
PHROG	UHGV-0189449_41	phrog_4210	57.0	1.4e-16	DNA polymerase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0189449_41	742733.HMPREF9469_05066	81.3	1.7e-17	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0189449	Yes	32,013	46	51	1