vOTU vOTU-162402

vOTU: vOTU-162402

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162402
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00767 → vGENUS-01347 → vOTU-162402
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0081927
Biosample ID	N/A
Genome length (bp)	25,323 bps
CheckV completeness	63.88% (Medium-quality)
CDS count	38
CDS density	87.67%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A	Total connections	13	Host agreement	92.31
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena	Total connections	40	Host agreement	97.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0081927_2	UniRef90_UPI001C0F3DBD	113.0	9.39e-28	N/A	N/A
eggNOG-mapper	UHGV-0081927_2	1196322.A370_04225	80.1	8.83e-16	N/A	N/A
PHROG	UHGV-0081927_3	phrog_28526	120.8	3.5e-36	N/A	unknown function
UniRef90	UHGV-0081927_3	UniRef90_A0A415D4T1	89.7	9.82e-23	N/A	N/A
eggNOG-mapper	UHGV-0081927_3	411462.DORLON_00769	94.7	1.71e-25	N/A	N/A
Pfam	UHGV-0081927_3	PF04255	N/A	N/A	N/A	DUF433
eggNOG-mapper	UHGV-0081927_4	411462.DORLON_00772	47.4	0.00000178	N/A	N/A
PHROG	UHGV-0081927_5	phrog_12931	134.2	5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0081927_5	411462.DORLON_00773	228.0	0	N/A	N/A
PHROG	UHGV-0081927_6	phrog_25635	178.4	0	N/A	unknown function
UniRef90	UHGV-0081927_6	UniRef90_UPI001570499E	288.0	0	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0081927_6	411461.DORFOR_01178	263.0	0	N/A	N/A
structural_annotation	UHGV-0081927_6	PF18573,PF20747,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_7	phrog_538	218.7	0	minor tail protein	tail
UniRef90	UHGV-0081927_7	UniRef90_UPI001E2C8064	368.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0081927_7	411461.DORFOR_01177	423.0	0	N/A	N/A
Pfam	UHGV-0081927_7	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0081927_7	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0081927_8	UniRef90_UPI0015709E93	285.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0081927_8	411461.DORFOR_01176	383.0	0	N/A	N/A
structural_annotation	UHGV-0081927_8	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0081927_9	K10421	40.4	0.0000000000064	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0081927_9	phrog_19074	401.6	0	N/A	unknown function
UniRef90	UHGV-0081927_9	UniRef90_A0A173RDD3	1806.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0081927_9	411461.DORFOR_01175	655.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0081927_9	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0081927_9	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0081927_9	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0081927_9	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_10	phrog_1533	77.9	8.2e-23	tail length tape measure protein	tail
UniRef90	UHGV-0081927_10	UniRef90_A0A173RCX1	182.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0081927_10	411461.DORFOR_01175	129.0	3.14e-33	phage tail tape measure protein	N/A
NCBIFam	UHGV-0081927_10	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0081927_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0081927_11	phrog_706	159.9	0	N/A	unknown function
UniRef90	UHGV-0081927_11	UniRef90_A0A173RDK1	390.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0081927_11	411461.DORFOR_01174	211.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0081927_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0081927_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_12	phrog_4450	67.1	3.1e-19	N/A	unknown function
UniRef90	UHGV-0081927_12	UniRef90_A0A7X3SKC0	89.0	1.4e-20	AP endonuclease	N/A
eggNOG-mapper	UHGV-0081927_12	931276.Cspa_c07520	58.2	0.00000000253	N/A	N/A
Pfam	UHGV-0081927_12	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0081927_12	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_13	phrog_820	92.5	3.9e-27	major tail protein	tail
UniRef90	UHGV-0081927_13	UniRef90_A0A174M1L1	272.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0081927_13	411461.DORFOR_01172	284.0	0	N/A	N/A
structural_annotation	UHGV-0081927_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_14	phrog_3266	69.3	5.4e-20	tail completion	connector
structural_annotation	UHGV-0081927_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_15	phrog_556	54.3	0.0000000000000019	minor head protein	head and packaging
UniRef90	UHGV-0081927_15	UniRef90_UPI001E609FF9	197.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0081927_15	411461.DORFOR_01170	205.0	0	Minor capsid protein	N/A
Pfam	UHGV-0081927_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0081927_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_16	phrog_3366	92.6	4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0081927_16	999411.HMPREF1092_03319	59.3	0.00000000278	N/A	N/A
Pfam	UHGV-0081927_16	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0081927_16	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_17	phrog_541	90.3	1.9e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0081927_17	1449050.JNLE01000003_gene3888	55.8	0.0000000292	N/A	N/A
PHROG	UHGV-0081927_18	phrog_283	216.0	0	major head protein	head and packaging
UniRef90	UHGV-0081927_18	UniRef90_A0A173REC9	687.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0081927_18	411461.DORFOR_01167	578.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0081927_18	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0081927_18	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_19	phrog_194	99.8	3.1e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0081927_19	UniRef90_A0A173RCF7	387.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0081927_19	411461.DORFOR_01166	236.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0081927_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0081927_20	phrog_355	55.7	9.4e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0081927_20	UniRef90_A0A415UCX1	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0081927_20	411461.DORFOR_01165	192.0	0	N/A	N/A
structural_annotation	UHGV-0081927_20	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_22	phrog_581	281.0	0	minor head protein	head and packaging
UniRef90	UHGV-0081927_22	UniRef90_A0A173RCB2	1112.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0081927_22	411461.DORFOR_01164	848.0	0	N/A	N/A
Pfam	UHGV-0081927_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0081927_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0081927_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0081927_23	phrog_533	107.7	9.8e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0081927_23	411461.DORFOR_01163	224.0	0	N/A	N/A
KOfam	UHGV-0081927_24	K07171	59.5	9.3e-17	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0081927_24	phrog_1936	86.4	3.5e-25	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0081927_24	UniRef90_UPI0015711440	108.0	2.77e-26	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0081927_24	411461.DORFOR_01157	113.0	5.39e-29	N/A	N/A
Pfam	UHGV-0081927_24	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0081927_24	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0081927_24	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
KOfam	UHGV-0081927_32	K18830	69.6	5.3e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0081927_32	phrog_8	58.4	1.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0081927_32	UniRef90_A0A173RBE6	271.0	0	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0081927_32	1280698.AUJS01000007_gene1002	225.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0081927_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0081927_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0081927_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0081927_34	PF12869,PF01336,NF012035,COG4085	N/A	N/A	N/A	N/A
KOfam	UHGV-0081927_36	K14059	142.7	4.49957e-42	int; integrase	N/A
PHROG	UHGV-0081927_36	phrog_1	160.7	0	integrase	integration and excision
UniRef90	UHGV-0081927_36	UniRef90_A0A173RBY2	626.0	0	Site-specific tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0081927_36	1280698.AUJS01000007_gene999	469.0	0	Phage integrase family	N/A
Pfam	UHGV-0081927_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0081927_36	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0081927_36	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0081927_37	K06131	129.7	3.1e-38	clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]	N/A
UniRef90	UHGV-0081927_37	UniRef90_A0A173WYL4	529.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0081927_37	1280698.AUJS01000016_gene1773	436.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-0081927_37	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0081927_37	COG4905	N/A	N/A	N/A	N/A
UniRef90	UHGV-0081927_38	UniRef90_A0A0K9NAM5	146.0	1.79e-38	RNA polymerase principal sigma factor, sigma 70	N/A
eggNOG-mapper	UHGV-0081927_38	411462.DORLON_00093	496.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0081927	Yes	25,323	42	64	1