vOTU vOTU-162590

vOTU: vOTU-162590

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162590
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00491 → vGENUS-00436 → vOTU-162590
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-127
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0114339
Biosample ID	N/A
Genome length (bp)	46,268 bps
CheckV completeness	78.81% (Medium-quality)
CDS count	70
CDS density	86.15%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-127	Total connections	888	Host agreement	74.44
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-127 → CAG-127 sp900319515	Total connections	12	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.81)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0114339_1	UniRef90_A0A415UNW3	75.9	2.45e-16	N-acetylmuramoyl-L-alanine amidase (Fragment)	N/A
eggNOG-mapper	UHGV-0114339_1	1461580.CCAS010000022_gene2388	101.0	2.28e-24	Ami_3	N/A
Pfam	UHGV-0114339_1	PF07538	N/A	N/A	Clostridial hydrophobic W	ChW
COG	UHGV-0114339_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
KOfam	UHGV-0114339_2	K03090	116.0	4.2e-34	sigB; RNA polymerase sigma-B factor	N/A
PHROG	UHGV-0114339_2	phrog_351	109.4	3.9e-32	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0114339_2	UniRef90_R5NPL8	288.0	0	RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0114339_2	411489.CLOL250_00024	222.0	0	Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released	N/A
Pfam	UHGV-0114339_2	PF04539	N/A	N/A	Sigma-70 region 3	Sigma70_r3
Pfam	UHGV-0114339_2	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0114339_2	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0114339_2	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114339_2	PF04545,PF04539,MF_00962,NF006071,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_4	phrog_21718	55.3	0.0000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0114339_4	658655.HMPREF0988_00919	103.0	9.21e-26	N/A	N/A
structural_annotation	UHGV-0114339_4	NF033819	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114339_5	658655.HMPREF0988_00918	90.5	4.03e-23	N/A	N/A
PHROG	UHGV-0114339_6	phrog_16490	198.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0114339_6	397290.C810_01328	211.0	0	N/A	N/A
PHROG	UHGV-0114339_8	phrog_20016	230.4	0	N/A	unknown function
UniRef90	UHGV-0114339_8	UniRef90_A0A285PT46	168.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0114339_8	397290.C810_05214	233.0	0	N/A	N/A
structural_annotation	UHGV-0114339_8	PF18573,NF033147	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114339_9	658655.HMPREF0988_00915	70.5	0.00000000000547	N/A	N/A
PHROG	UHGV-0114339_10	phrog_1233	48.5	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0114339_10	397290.C810_01336	103.0	1.66e-27	N/A	N/A
structural_annotation	UHGV-0114339_12	PF10944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_15	UniRef90_A0A8D9PGX6	146.0	1.82169e-44	Histidine triad protein	N/A
structural_annotation	UHGV-0114339_15	MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114339_19	658655.HMPREF0988_00903	47.4	0.00000335	N/A	N/A
UniRef90	UHGV-0114339_22	UniRef90_A0A8D9UIS5	123.0	9.12e-31	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0114339_22	658655.HMPREF0988_00895	139.0	4.56e-39	N/A	N/A
PHROG	UHGV-0114339_24	phrog_236	106.0	6.5e-31	nucleotide kinase	other
UniRef90	UHGV-0114339_24	UniRef90_A0A8D9PGN7	140.0	1.22e-40	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-0114339_24	1123263.AUKY01000015_gene1590	85.5	1.99e-20	N/A	N/A
Pfam	UHGV-0114339_24	PF11753	N/A	N/A	N/A	DUF3310
PHROG	UHGV-0114339_25	phrog_2685	42.2	0.000000000016	partition protein ATPase	other
Pfam	UHGV-0114339_25	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
KOfam	UHGV-0114339_26	K14060	109.9	3.2e-32	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0114339_26	phrog_125	171.7	0	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114339_26	UniRef90_C0CM35	240.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_26	476272.RUMHYD_01910	240.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0114339_26	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0114339_26	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0114339_26	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_28	phrog_4707	96.0	3.2e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114339_28	UniRef90_A0A1G5FGV6	91.7	3.14e-18	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_28	1378168.N510_03331	105.0	6.71e-24	N/A	N/A
Pfam	UHGV-0114339_28	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0114339_28	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0114339_28	PF02334,MF_01909,NF040939,COG1675	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_30	phrog_14301	116.4	0	RNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114339_30	UniRef90_UPI001BCD9F22	157.0	8.40779e-45	N/A	N/A
eggNOG-mapper	UHGV-0114339_30	1453505.JASY01000021_gene52	147.0	4.46033e-42	N/A	N/A
Pfam	UHGV-0114339_30	PF17720	N/A	N/A	N/A	DUF5565
structural_annotation	UHGV-0114339_30	PF17720	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_32	UniRef90_UPI0011072322	74.3	0.00000000000000788	N/A	N/A
eggNOG-mapper	UHGV-0114339_32	397290.C810_05229	70.1	0.0000000000000628	N/A	N/A
structural_annotation	UHGV-0114339_32	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_33	phrog_38	158.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0114339_33	UniRef90_A0A8D9PG33	770.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0114339_33	1232453.BAIF02000058_gene1623	424.0	0	TIGRFAM Phage	N/A
COG	UHGV-0114339_33	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114339_33	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_34	phrog_36	55.8	9.9e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114339_34	UniRef90_A0A373NRA4	85.9	1.02e-18	N/A	N/A
eggNOG-mapper	UHGV-0114339_34	702437.HMPREF9432_00895	50.4	0.00000791	sigma factor activity	N/A
COG	UHGV-0114339_34	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0114339_34	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_36	phrog_64	170.8	0	portal protein	head and packaging
UniRef90	UHGV-0114339_36	UniRef90_A0A3R6ASF4	738.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0114339_36	1298920.KI911353_gene2663	471.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0114339_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0114339_36	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_37	UniRef90_R6C0B6	125.0	3.54e-33	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0114339_38	phrog_909	48.6	0.00000000000015	major head protein	head and packaging
eggNOG-mapper	UHGV-0114339_38	1298920.KI911353_gene2661	117.0	7.91e-33	N/A	N/A
PHROG	UHGV-0114339_39	phrog_29	164.8	0	major head protein	head and packaging
UniRef90	UHGV-0114339_39	UniRef90_UPI001D02C54B	644.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0114339_39	1298920.KI911353_gene2660	346.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0114339_39	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0114339_39	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_40	UniRef90_A0A8D9UIY7	60.5	0.000000000369	Rho termination factor	N/A
structural_annotation	UHGV-0114339_40	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114339_41	397290.C810_01402	61.2	0.000000000163	N/A	N/A
PHROG	UHGV-0114339_42	phrog_1863	49.2	0.000000000000054	N/A	unknown function
eggNOG-mapper	UHGV-0114339_42	742741.HMPREF9475_00442	68.6	0.000000000000115	N/A	N/A
PHROG	UHGV-0114339_43	phrog_18218	128.1	3.1e-38	N/A	unknown function
UniRef90	UHGV-0114339_43	UniRef90_A0A8D9PGR5	151.0	1.4013e-45	Holin	N/A
eggNOG-mapper	UHGV-0114339_43	411902.CLOBOL_03424	78.2	2.34e-17	N/A	N/A
structural_annotation	UHGV-0114339_43	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114339_44	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_45	UniRef90_UPI001BBD4500	142.0	3.74e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0114339_45	397290.C810_01411	204.0	0	N/A	N/A
AcrCatalog	UHGV-0114339_45	cluster_24841	40.0	0.00000421	NA	N/A
structural_annotation	UHGV-0114339_45	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114339_46	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0114339_47	476272.RUMHYD_01968	186.0	0	N/A	N/A
structural_annotation	UHGV-0114339_47	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_48	phrog_36112	57.0	2.2e-16	N/A	unknown function
UniRef90	UHGV-0114339_48	UniRef90_A0A8D9PG71	134.0	2.83e-37	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0114339_48	1298920.KI911353_gene2651	119.0	4.02e-32	N/A	N/A
structural_annotation	UHGV-0114339_48	PF16478	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_50	phrog_1535	114.8	1.2e-37	tail length tape measure protein	tail
UniRef90	UHGV-0114339_50	UniRef90_A0A318EME6	170.0	9.31e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0114339_50	1298920.KI911353_gene2649	222.0	0	tape measure	N/A
COG	UHGV-0114339_50	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-0114339_51	phrog_1194	52.2	0.0000000000000099	N/A	unknown function
eggNOG-mapper	UHGV-0114339_51	742733.HMPREF9469_01808	68.6	0.000000000000661	N/A	N/A
Pfam	UHGV-0114339_51	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0114339_51	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_52	phrog_18190	368.1	0	N/A	unknown function
UniRef90	UHGV-0114339_52	UniRef90_R0C2S4	234.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_52	1298920.KI911353_gene2679	200.0	0	N/A	N/A
Pfam	UHGV-0114339_52	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0114339_52	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_53	phrog_17196	144.6	8.09951e-43	kinase	other
UniRef90	UHGV-0114339_53	UniRef90_D4L3U0	334.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_53	483218.BACPEC_01141	207.0	0	N/A	N/A
structural_annotation	UHGV-0114339_53	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-0114339_54	K01447	84.2	2e-24	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0114339_54	phrog_1493	166.6	0	endolysin	lysis
UniRef90	UHGV-0114339_54	UniRef90_A0A416AFQ9	368.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0114339_54	553973.CLOHYLEM_04450	209.0	0	Ami_2	N/A
Pfam	UHGV-0114339_54	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0114339_54	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0114339_54	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0114339_54	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
Pfam	UHGV-0114339_56	PF16729	N/A	N/A	N/A	DUF5067
PHROG	UHGV-0114339_57	phrog_8	50.1	0.000000000000065	transcriptional regulator	transcription regulation
UniRef90	UHGV-0114339_57	UniRef90_R6ZMD8	92.8	4.91e-22	Toxin-antitoxin system antitoxin component Xre family	N/A
eggNOG-mapper	UHGV-0114339_57	1027396.LMOSA_21110	57.4	0.00000000266	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0114339_57	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0114339_57	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114339_57	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0114339_58	UniRef90_A0A174J2F0	62.4	0.0000000000145	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_58	665950.HMPREF1025_02561	56.2	0.000000000603	sequence-specific DNA binding	N/A
Pfam	UHGV-0114339_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0114339_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0114339_58	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0114339_60	K07741	213.1	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0114339_60	phrog_63	178.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0114339_60	UniRef90_UPI001C00DDF6	387.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_60	658655.HMPREF0988_02592	321.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0114339_60	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0114339_60	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0114339_60	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0114339_60	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
KOfam	UHGV-0114339_63	K19171	73.1	3e-21	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0114339_63	phrog_77	113.9	1.4e-33	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114339_63	UniRef90_A0A412RQV0	377.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0114339_63	397290.C810_01461	343.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0114339_63	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0114339_63	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0114339_64	PF18129,MF_00613,NF002745,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_65	phrog_2185	301.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0114339_65	UniRef90_UPI001BC46C39	485.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0114339_65	658655.HMPREF0988_00886	379.0	0	N/A	N/A
structural_annotation	UHGV-0114339_65	NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0114339_66	phrog_25456	87.5	1e-25	N/A	unknown function
KOfam	UHGV-0114339_68	K06167	41.0	0.000000000019	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0114339_68	phrog_392	191.6	0	metal-dependent hydrolase	other
UniRef90	UHGV-0114339_68	UniRef90_A0A412RQX2	370.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0114339_68	1443122.Z958_05735	168.0	0	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0114339_68	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0114339_68	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0114339_68	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0114339_68	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0114339	Yes	46,268	39	79	1