vOTU vOTU-162901

vOTU: vOTU-162901

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162901
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00767 → vGENUS-01576 → vOTU-162901
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0032696
Biosample ID	N/A
Genome length (bp)	33,920 bps
CheckV completeness	89.25% (Medium-quality)
CDS count	51
CDS density	93.19%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans	Total connections	30	Host agreement	86.67
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea → Dorea formicigenerans	Total connections	16	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.25)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0032696_1	K14059	176.8	0	int; integrase	N/A
PHROG	UHGV-0032696_1	phrog_1	159.5	0	integrase	integration and excision
UniRef90	UHGV-0032696_1	UniRef90_B0G4D9	705.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0032696_1	411461.DORFOR_01126	705.0	0	Phage integrase family	N/A
Pfam	UHGV-0032696_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0032696_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0032696_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0032696_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032696_2	PF12869,PF01336,NF012035,COG4085	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_4	K18830	51.3	0.000000000000022	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0032696_4	phrog_8	40.4	0.00000000003	transcriptional regulator	transcription regulation
UniRef90	UHGV-0032696_4	UniRef90_A0A413QMZ1	276.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0032696_4	471875.RUMLAC_01755	102.0	2.89e-26	sequence-specific DNA binding	N/A
Pfam	UHGV-0032696_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0032696_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0032696_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_8	phrog_36464	61.0	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0032696_8	411461.DORFOR_01136	148.0	0	N/A	N/A
structural_annotation	UHGV-0032696_8	PF09035	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_11	phrog_3584	167.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0032696_11	1280698.AUJS01000007_gene1013	415.0	0	N/A	N/A
structural_annotation	UHGV-0032696_11	PF01446	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_13	K04763	167.3	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0032696_13	phrog_1	126.2	3.3e-37	integrase	integration and excision
UniRef90	UHGV-0032696_13	UniRef90_A0A143XML8	296.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0032696_13	1121097.JCM15093_3058	221.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0032696_13	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0032696_13	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0032696_13	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0032696_13	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_16	phrog_531	48.9	0.00000000000012	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032696_16	UniRef90_A0A1M6MV17	135.0	4.75e-38	Ribonuclease HI	N/A
eggNOG-mapper	UHGV-0032696_16	411461.DORFOR_01140	270.0	0	RNA-DNA hybrid ribonuclease activity	N/A
COG	UHGV-0032696_16	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0032696_16	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_17	K00571	93.1	3.6e-27	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0032696_17	phrog_23224	214.8	0	DNA methyltransferase	other
UniRef90	UHGV-0032696_17	UniRef90_A0A396PTY1	404.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0032696_17	1214217.ALNF01000014_gene1390	326.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0032696_17	MTase_II_00172	51.2	8.6e-28	Type II methyltransferase	RM
Pfam	UHGV-0032696_17	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0032696_17	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0032696_17	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_18	K03497	133.6	2e-39	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0032696_18	phrog_6218	191.1	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032696_18	UniRef90_B0G4F7	851.0	0	ParB-like protein	N/A
eggNOG-mapper	UHGV-0032696_18	411461.DORFOR_01144	851.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0032696_18	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0032696_18	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0032696_18	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0032696_18	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_19	phrog_7566	100.5	8.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0032696_19	411461.DORFOR_01145	254.0	0	N/A	N/A
structural_annotation	UHGV-0032696_20	PF08169,MF_01549,TIGR00405	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_21	phrog_24386	118.5	6e-35	N/A	unknown function
eggNOG-mapper	UHGV-0032696_21	411461.DORFOR_01147	224.0	0	COG NOG28949 non supervised orthologous group	N/A
COG	UHGV-0032696_21	COG0241	N/A	N/A	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	N/A
structural_annotation	UHGV-0032696_21	TIGR01689,COG0241	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_22	phrog_31991	178.5	0	N/A	unknown function
PHROG	UHGV-0032696_23	phrog_38110	123.0	6.2e-37	N/A	unknown function
PHROG	UHGV-0032696_24	phrog_26445	40.1	0.0000000000003	N/A	unknown function
UniRef90	UHGV-0032696_24	UniRef90_A0A8B3AJ48	104.0	2.82e-26	AsnC family protein	N/A
structural_annotation	UHGV-0032696_24	PF00196,TIGR04381,COG2771	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032696_25	PF09297,MF_00327	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_27	phrog_38560	50.1	0.000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-0032696_27	610130.Closa_0723	76.3	1.14e-17	N/A	N/A
PHROG	UHGV-0032696_28	phrog_33451	52.0	0.0000000000000046	N/A	unknown function
UniRef90	UHGV-0032696_28	UniRef90_A0A414QEQ0	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-0032696_28	411461.DORFOR_01155	129.0	1.28e-37	N/A	N/A
Pfam	UHGV-0032696_28	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0032696_28	PF04448	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_29	K07171	74.5	1.9e-21	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0032696_29	phrog_1936	111.7	3.3e-33	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0032696_29	UniRef90_UPI0015711440	149.0	1.02995e-41	type II toxin-antitoxin system PemK/MazF family toxin	N/A
eggNOG-mapper	UHGV-0032696_29	411461.DORFOR_01157	332.0	0	N/A	N/A
Pfam	UHGV-0032696_29	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0032696_29	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0032696_29	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_31	phrog_8684	98.8	9.2e-30	N/A	unknown function
UniRef90	UHGV-0032696_31	UniRef90_UPI000677CD2A	285.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0032696_31	457412.RSAG_01162	185.0	0	YopX protein	N/A
Pfam	UHGV-0032696_31	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0032696_31	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0032696_31	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_33	K04763	171.1	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0032696_33	phrog_1	151.5	7.00649e-45	integrase	integration and excision
UniRef90	UHGV-0032696_33	UniRef90_B0G4H3	665.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0032696_33	411461.DORFOR_01160	665.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0032696_33	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0032696_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0032696_33	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0032696_33	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_34	phrog_11237	116.6	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0032696_34	411461.DORFOR_01161	281.0	0	N/A	N/A
KOfam	UHGV-0032696_35	K06909	442.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0032696_35	phrog_2606	334.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0032696_35	UniRef90_B0G4H5	1325.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0032696_35	411461.DORFOR_01162	1325.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0032696_35	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
Pfam	UHGV-0032696_35	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0032696_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0032696_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0032696_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0032696_35	PF04466,PF17288,PF06056,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_36	phrog_533	329.8	0	portal protein	head and packaging
UniRef90	UHGV-0032696_36	UniRef90_B0G4H6	895.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0032696_36	411461.DORFOR_01163	895.0	0	N/A	N/A
structural_annotation	UHGV-0032696_36	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_37	phrog_581	285.3	0	minor head protein	head and packaging
UniRef90	UHGV-0032696_37	UniRef90_A0A173RCB2	858.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0032696_37	411461.DORFOR_01164	1147.0	0	N/A	N/A
Pfam	UHGV-0032696_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0032696_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032696_37	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_38	phrog_355	54.7	0.0000000000000017	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032696_38	UniRef90_A0A415UCX1	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-0032696_38	411461.DORFOR_01165	190.0	0	N/A	N/A
structural_annotation	UHGV-0032696_38	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_39	phrog_194	98.9	5.7e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0032696_39	UniRef90_A0A173RCF7	240.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0032696_39	411461.DORFOR_01166	390.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0032696_39	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0032696_39	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_40	phrog_283	201.4	0	major head protein	head and packaging
UniRef90	UHGV-0032696_40	UniRef90_A0A173REC9	546.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-0032696_40	411461.DORFOR_01167	659.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0032696_40	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0032696_40	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_41	phrog_541	79.9	2.7e-23	head-tail adaptor	connector
eggNOG-mapper	UHGV-0032696_41	411902.CLOBOL_00133	69.3	0.000000000000194	N/A	N/A
PHROG	UHGV-0032696_42	phrog_3366	96.1	3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0032696_42	573061.Clocel_3539	65.1	0.0000000000187	N/A	N/A
Pfam	UHGV-0032696_42	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0032696_42	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_43	phrog_556	61.7	1e-17	minor head protein	head and packaging
UniRef90	UHGV-0032696_43	UniRef90_UPI001E609FF9	216.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0032696_43	411461.DORFOR_01170	284.0	0	Minor capsid protein	N/A
Pfam	UHGV-0032696_43	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0032696_43	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_44	phrog_3266	75.5	6.3e-22	tail completion	connector
structural_annotation	UHGV-0032696_44	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_45	phrog_820	100.3	1.5e-29	major tail protein	tail
UniRef90	UHGV-0032696_45	UniRef90_A0A412UWV6	253.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0032696_45	411461.DORFOR_01172	337.0	0	N/A	N/A
structural_annotation	UHGV-0032696_45	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_46	phrog_4450	59.1	8.9e-17	N/A	unknown function
UniRef90	UHGV-0032696_46	UniRef90_A0A7X3SKC0	102.0	6.99e-26	AP endonuclease	N/A
eggNOG-mapper	UHGV-0032696_46	931276.Cspa_c07520	56.2	0.0000000141	N/A	N/A
Pfam	UHGV-0032696_46	PF20378	N/A	N/A	N/A	DUF6673
PHROG	UHGV-0032696_47	phrog_706	157.0	0	N/A	unknown function
UniRef90	UHGV-0032696_47	UniRef90_B0G4I7	385.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0032696_47	411461.DORFOR_01174	385.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0032696_47	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0032696_47	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0032696_48	K10421	40.0	0.0000000000098	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0032696_48	phrog_19074	477.9	0	N/A	unknown function
UniRef90	UHGV-0032696_48	UniRef90_A0A413QNB2	1806.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0032696_48	411461.DORFOR_01175	1853.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0032696_48	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0032696_48	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0032696_48	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0032696_48	PF10145,TIGR01760	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032696_49	UniRef90_UPI0015709E93	285.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0032696_49	411461.DORFOR_01176	570.0	0	N/A	N/A
structural_annotation	UHGV-0032696_49	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_50	phrog_538	194.6	0	minor tail protein	tail
UniRef90	UHGV-0032696_50	UniRef90_UPI001E2C8064	320.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0032696_50	411461.DORFOR_01177	673.0	0	N/A	N/A
structural_annotation	UHGV-0032696_50	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0032696_51	phrog_13141	160.6	0	N/A	unknown function
UniRef90	UHGV-0032696_51	UniRef90_UPI00156D68EE	253.0	0	H-type lectin domain-containing protein	N/A
eggNOG-mapper	UHGV-0032696_51	411461.DORFOR_01178	345.0	0	N/A	N/A
structural_annotation	UHGV-0032696_51	PF20747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0032696	Yes	33,920	42	89	1