vOTU vOTU-162927

vOTU: vOTU-162927

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162927
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00237 → vGENUS-14362 → vOTU-162927
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lactarius
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1964110
Biosample ID	N/A
Genome length (bp)	27,722 bps
CheckV completeness	72.42% (Medium-quality)
CDS count	40
CDS density	93.73%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lactarius	Total connections	20	Host agreement	85
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1964110_2	K01160	64.4	2.9e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1964110_2	phrog_140	138.0	4.10006e-41	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1964110_2	UniRef90_A0A6I3PW45	286.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1964110_2	35344.A0A097PAS0_BPT12	178.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1964110_2	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-1964110_2	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-1964110_3	UniRef90_UPI00189A7F5F	629.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1964110_3	435842.HMPREF0848_00198	290.0	0	Pilin isopeptide linkage domain protein	N/A
Pfam	UHGV-1964110_3	PF17961	N/A	N/A	Bacterial Ig domain	Big_8
Pfam	UHGV-1964110_3	PF05737	N/A	N/A	Collagen binding domain	Collagen_bind
Pfam	UHGV-1964110_3	PF00746	N/A	N/A	LPXTG cell wall anchor motif	Gram_pos_anchor
COG	UHGV-1964110_3	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A
structural_annotation	UHGV-1964110_3	PF05737,PF17961,NF000535	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_5	phrog_1992	163.4	0	MazG-like pyrophosphatase	other
UniRef90	UHGV-1964110_5	UniRef90_A0A6I3PU23	283.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1964110_5	999425.HMPREF9186_02016	252.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-1964110_5	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1964110_5	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_6	phrog_121	150.8	5.60519e-45	N/A	unknown function
UniRef90	UHGV-1964110_6	UniRef90_UPI001CBC2CDA	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964110_6	1035189.HMPREF9954_1953	129.0	3.01e-35	N/A	N/A
Pfam	UHGV-1964110_6	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1964110_6	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_7	phrog_98	102.6	3e-30	N/A	unknown function
UniRef90	UHGV-1964110_7	UniRef90_A0A3G8F867	145.0	1.76984e-42	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1964110_7	1000588.HMPREF9965_1710	86.3	4.73e-20	YopX protein	N/A
Pfam	UHGV-1964110_7	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1964110_7	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1964110_7	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1964110_11	K18830	63.1	1.4e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1964110_11	phrog_8	79.7	4.2e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-1964110_11	UniRef90_A0A4D5ZH55	123.0	1.02e-32	HTH-type transcriptional regulator	N/A
eggNOG-mapper	UHGV-1964110_11	997830.HMPREF1124_0205	87.0	6.9e-19	transcriptional	N/A
Pfam	UHGV-1964110_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1964110_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1964110_11	PF12844,MF_02017,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_12	phrog_248	124.9	5e-37	transcriptional activator	transcription regulation
UniRef90	UHGV-1964110_12	UniRef90_A0A1F0ATN1	261.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1964110_12	1054460.SPPN_00355	152.0	1.4013e-45	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-1964110_12	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1964110_12	PF07374,TIGR01637	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_13	phrog_498	74.1	2e-21	DNA methyltransferase	other
UniRef90	UHGV-1964110_13	UniRef90_A0A0R2C0U5	97.8	1.84e-23	ParB-like protein	N/A
eggNOG-mapper	UHGV-1964110_13	1154860.SAG0136_06270	95.5	9.41e-22	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1964110_13	MTase_II_00015	48.7	0.000000000000092	Type II methyltransferase	RM
COG	UHGV-1964110_13	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-1964110_14	K00571	110.4	2.3e-32	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1964110_14	phrog_498	216.4	0	DNA methyltransferase	other
UniRef90	UHGV-1964110_14	UniRef90_A0A2H4JHY6	394.0	0	Putative transferase	N/A
eggNOG-mapper	UHGV-1964110_14	12402.Q708N6_9CAUD	280.0	0	N-methyltransferase activity	N/A
PADLOC	UHGV-1964110_14	MTase_II_00157	101.3	1.9e-29	Type II methyltransferase	RM
Pfam	UHGV-1964110_14	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
structural_annotation	UHGV-1964110_14	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_15	phrog_2412	156.0	0	N/A	unknown function
UniRef90	UHGV-1964110_15	UniRef90_A0A150NN47	125.0	7.48e-34	N/A	N/A
eggNOG-mapper	UHGV-1964110_15	12402.Q708N5_9CAUD	114.0	1.56e-30	N/A	N/A
KOfam	UHGV-1964110_16	K06909	284.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1964110_16	phrog_3717	158.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1964110_16	UniRef90_UPI001BEC4E95	835.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1964110_16	1121871.AUAT01000040_gene913	615.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1964110_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1964110_16	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1964110_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1964110_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1964110_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_17	phrog_533	588.7	0	portal protein	head and packaging
UniRef90	UHGV-1964110_17	UniRef90_UPI001BE74F17	881.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1964110_17	537874.B3GW00_9CAUD	686.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1964110_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1964110_17	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1964110_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_18	phrog_581	376.9	0	minor head protein	head and packaging
UniRef90	UHGV-1964110_18	UniRef90_UPI0012BBAE7F	642.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-1964110_18	537874.B3GW01_9CAUD	524.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1964110_18	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1964110_18	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_20	phrog_2303	149.5	2.24208e-44	head scaffolding protein	head and packaging
UniRef90	UHGV-1964110_20	UniRef90_A0A150NS01	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964110_20	537874.B3GW02_9CAUD	177.0	0	N/A	N/A
PHROG	UHGV-1964110_21	phrog_840	422.4	0	major head protein	head and packaging
UniRef90	UHGV-1964110_21	UniRef90_UPI001BEAC940	529.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1964110_21	1123302.KB904167_gene518	432.0	0	N/A	N/A
structural_annotation	UHGV-1964110_21	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_22	phrog_2910	43.5	0.0000000000053	N/A	unknown function
UniRef90	UHGV-1964110_22	UniRef90_U4KJ97	51.6	0.0000007	N/A	N/A
PHROG	UHGV-1964110_23	phrog_541	105.7	3e-31	head-tail adaptor	connector
UniRef90	UHGV-1964110_23	UniRef90_A0A3S4LW47	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-1964110_23	646413.C5IUJ7_9CAUD	159.0	0	N/A	N/A
PHROG	UHGV-1964110_24	phrog_793	85.6	3.6e-25	head-tail adaptor	connector
UniRef90	UHGV-1964110_24	UniRef90_UPI001BE5FBE4	234.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1964110_24	537874.B3GW07_9CAUD	91.7	2.03e-22	Minor capsid protein	N/A
Pfam	UHGV-1964110_24	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1964110_24	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_25	phrog_556	82.8	3.4e-24	minor head protein	head and packaging
UniRef90	UHGV-1964110_25	UniRef90_UPI0012BC2934	206.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1964110_25	537874.B3GW08_9CAUD	144.0	3.68541e-43	Minor capsid protein	N/A
Pfam	UHGV-1964110_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1964110_25	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_26	phrog_913	140.4	5.4006e-42	minor head protein	head and packaging
UniRef90	UHGV-1964110_26	UniRef90_UPI0012BB7B63	253.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1964110_26	1121871.AUAT01000035_gene1282	144.0	1.86933e-42	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1964110_26	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1964110_26	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_27	phrog_820	174.2	0	major tail protein	tail
UniRef90	UHGV-1964110_27	UniRef90_UPI0012BD2CD1	263.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1964110_27	537874.B3GW10_9CAUD	231.0	0	N/A	N/A
structural_annotation	UHGV-1964110_27	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_28	phrog_1061	111.6	4.7e-33	N/A	unknown function
UniRef90	UHGV-1964110_28	UniRef90_A0A1M5XPW2	112.0	1.34e-28	Phage tail assembly chaperone protein Gp14 ()A118	N/A
eggNOG-mapper	UHGV-1964110_28	537874.B3GW11_9CAUD	155.0	0	N/A	N/A
structural_annotation	UHGV-1964110_28	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_29	phrog_706	183.2	0	N/A	unknown function
UniRef90	UHGV-1964110_29	UniRef90_UPI001CBECD66	244.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1964110_29	537874.B3GW12_9CAUD	237.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1964110_29	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1964110_29	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_30	phrog_1686	777.2	0	tail length tape measure protein	tail
UniRef90	UHGV-1964110_30	UniRef90_A0A3A5Q505	1147.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1964110_30	537874.B3GW13_9CAUD	892.0	0	N/A	N/A
Pfam	UHGV-1964110_30	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1964110_30	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-1964110_30	PF20155,PF06456,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_31	phrog_33	77.9	2.3e-22	distal tail protein Dit	tail
UniRef90	UHGV-1964110_31	UniRef90_UPI001BE57815	416.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1964110_31	537874.B3GW14_9CAUD	278.0	0	Phage tail protein	N/A
Pfam	UHGV-1964110_31	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1964110_31	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1964110_31	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_32	phrog_7142	179.5	0	tail protein	tail
UniRef90	UHGV-1964110_32	UniRef90_UPI00158CB8AE	394.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1964110_32	537874.B3GW15_9CAUD	317.0	0	peptidoglycan catabolic process	N/A
NCBIFam	UHGV-1964110_32	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
PHROG	UHGV-1964110_33	phrog_1210	159.7	0	PblB-type receptor binding	other
UniRef90	UHGV-1964110_33	UniRef90_A0A1F0ZPD4	773.0	0	Gp58 domain-containing protein	N/A
eggNOG-mapper	UHGV-1964110_33	537874.B3GW15_9CAUD	465.0	0	peptidoglycan catabolic process	N/A
PHROG	UHGV-1964110_35	phrog_1554	93.3	2.7e-27	N/A	unknown function
UniRef90	UHGV-1964110_35	UniRef90_A0A4V0EM35	94.4	1.65e-21	N/A	N/A
eggNOG-mapper	UHGV-1964110_35	1005705.HMPREF9967_1055	193.0	0	N/A	N/A
PHROG	UHGV-1964110_36	phrog_1554	72.4	7.2e-21	N/A	unknown function
eggNOG-mapper	UHGV-1964110_36	997830.HMPREF1124_0611	74.7	0.00000000000000107	N/A	N/A
PHROG	UHGV-1964110_37	phrog_1296	90.2	1.1e-26	holin	lysis
UniRef90	UHGV-1964110_37	UniRef90_A0A0M9FH77	94.0	3.5e-23	Phage membrane protein	N/A
PHROG	UHGV-1964110_38	phrog_10091	77.9	1.1e-22	holin	lysis
UniRef90	UHGV-1964110_38	UniRef90_A0A4D6B4F0	162.0	0	Holin	N/A
eggNOG-mapper	UHGV-1964110_38	999425.HMPREF9186_02051	160.0	0	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1964110_38	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1964110_38	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1964110_38	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1964110_38	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_39	phrog_998	335.5	0	endolysin	lysis
UniRef90	UHGV-1964110_39	UniRef90_A0A8B1YVW6	557.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1964110_39	1069533.Sinf_0802	411.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1964110_39	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1964110_39	PF16775	N/A	N/A	Target recognition domain of lytic exoenzyme	ZoocinA_TRD
COG	UHGV-1964110_39	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1964110_39	PF16775,PF05382,NF008096,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1964110_40	phrog_6487	75.9	7.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-1964110_40	999425.HMPREF9186_02053	92.4	7.67e-23	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1964110	Yes	27,722	41	72	1