vOTU vOTU-162943

vOTU: vOTU-162943

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-162943
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00579 → vGENUS-02755 → vOTU-162943
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp900548625
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1463369
Biosample ID	SAMN05414911
Genome length (bp)	34,727 bps
CheckV completeness	78.31% (Medium-quality)
CDS count	63
CDS density	94.66%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp900548625	Total connections	17	Host agreement	94.12
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 78.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1463369_1	UniRef90_A0A2Z4GU98	177.0	0	Ribonuclease inhibitor	N/A
eggNOG-mapper	UHGV-1463369_1	563031.HMPREF0666_01114	81.3	6.42e-16	N/A	N/A
Pfam	UHGV-1463369_1	PF00560	N/A	N/A	Leucine Rich Repeat	LRR_1
PHROG	UHGV-1463369_3	phrog_4973	77.6	1.4e-22	N/A	unknown function
UniRef90	UHGV-1463369_3	UniRef90_UPI001D0904CC	97.8	3.22e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1463369_3	880073.Calab_0752	55.1	0.00000000363	Helix-turn-helix domain	N/A
Pfam	UHGV-1463369_3	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1463369_3	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_6	phrog_14970	206.4	0	N/A	unknown function
UniRef90	UHGV-1463369_6	UniRef90_UPI00123F00F5	160.0	2.8026e-45	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1463369_6	397291.C804_03856	157.0	1.4013e-44	double-strand break repair protein	N/A
Pfam	UHGV-1463369_6	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-1463369_6	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1463369_6	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_7	phrog_72	60.5	2.9e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463369_7	UniRef90_UPI001F3F3E5C	165.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-1463369_7	445972.ANACOL_01825	123.0	5.42e-33	N/A	N/A
structural_annotation	UHGV-1463369_7	PF05772,NF007281	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463369_8	UniRef90_A0A3D1LDS4	119.0	3.82e-33	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1463369_8	445972.ANACOL_01826	97.4	1.57e-25	HNH nucleases	N/A
Pfam	UHGV-1463369_8	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1463369_9	phrog_997	106.4	2.2e-31	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463369_9	UniRef90_R6MCS9	104.0	1.12e-26	N/A	N/A
eggNOG-mapper	UHGV-1463369_9	1203606.HMPREF1526_01889	140.0	1.07998e-41	replication terminator protein, phage associated	N/A
PHROG	UHGV-1463369_10	phrog_1029	134.8	5.19999e-40	N/A	unknown function
eggNOG-mapper	UHGV-1463369_10	552398.HMPREF0866_01625	122.0	4.24e-31	N/A	N/A
structural_annotation	UHGV-1463369_10	PF10065,COG5532	N/A	N/A	N/A	N/A
KOfam	UHGV-1463369_11	K03111	127.8	1.4e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1463369_11	phrog_44	129.5	2.8e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463369_11	UniRef90_R6LLA3	166.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1463369_11	693746.OBV_19910	160.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1463369_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1463369_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1463369_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1463369_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1463369_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463369_12	UniRef90_A0A7C1PUJ6	82.8	0.0000000000000011	N/A	N/A
structural_annotation	UHGV-1463369_12	PF07120,COG3756	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_13	phrog_757	136.7	1.3e-40	DNA methyltransferase	other
UniRef90	UHGV-1463369_13	UniRef90_UPI001A9B5584	266.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1463369_13	748224.HMPREF9436_03069	196.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1463369_13	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
Pfam	UHGV-1463369_14	PF10957	N/A	N/A	Sporulation protein Cse60	Spore_Cse60
KOfam	UHGV-1463369_15	K00390	45.3	2e-26	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1463369_15	phrog_424	94.2	9.2e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463369_15	UniRef90_A0A7C4YDR6	582.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1463369_15	1235800.C819_02256	509.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1463369_15	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1463369_15	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1463369_15	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463369_16	UniRef90_A0A417H740	161.0	0	N/A	N/A
Pfam	UHGV-1463369_16	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1463369_16	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_19	phrog_3377	188.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463369_19	UniRef90_Q4Z920	125.0	4.18e-33	ORF076	N/A
eggNOG-mapper	UHGV-1463369_19	1434319.W5RVD4_9CAUD	138.0	9.33e-38	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-1463369_19	HEase_00016	41.9	0.0000000000023	homing endonuclease	RM
PHROG	UHGV-1463369_23	phrog_2470	62.2	7.5e-18	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463369_23	UniRef90_A0A414ZRJ4	126.0	6.56e-36	N/A	N/A
eggNOG-mapper	UHGV-1463369_23	649747.HMPREF0083_06229	53.5	0.000000112	N/A	N/A
Pfam	UHGV-1463369_23	PF11750	N/A	N/A	N/A	DUF3307
structural_annotation	UHGV-1463369_23	PF11750	N/A	N/A	N/A	N/A
KOfam	UHGV-1463369_27	K00571	121.0	1.3e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1463369_27	phrog_67	102.2	1.9e-30	DNA methyltransferase	other
UniRef90	UHGV-1463369_27	UniRef90_A0A2U1CFM2	420.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1463369_27	411468.CLOSCI_00299	376.0	0	DNA methylase	N/A
PADLOC	UHGV-1463369_27	MTase_II_00157	94.3	1.4e-27	Type II methyltransferase	RM
Pfam	UHGV-1463369_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1463369_27	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1463369_27	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_28	phrog_31336	47.9	0.00000000000015	N/A	unknown function
UniRef90	UHGV-1463369_28	UniRef90_A0A5C7LKL9	73.6	0.00000000000000546	N/A	N/A
eggNOG-mapper	UHGV-1463369_28	1357732.A0A059PYA6_9CAUD	66.2	0.000000000000902	N/A	N/A
Pfam	UHGV-1463369_28	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1463369_28	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463369_29	UniRef90_UPI0019D1E2CF	289.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1463369_29	1410632.JHWW01000006_gene695	204.0	0	N/A	N/A
Pfam	UHGV-1463369_29	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1463369_29	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463369_30	PF10013	N/A	N/A	N/A	N/A
Pfam	UHGV-1463369_31	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-1463369_31	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
Pfam	UHGV-1463369_32	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
PHROG	UHGV-1463369_33	phrog_1770	59.9	5.2e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1463369_33	536233.CLO_1822	145.0	3.08986e-42	N/A	N/A
structural_annotation	UHGV-1463369_33	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-1463369_35	K03466	175.8	0	ftsK, spoIIIE; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family	N/A
PHROG	UHGV-1463369_35	phrog_1358	141.0	4.60046e-42	FtsK/SpoIIIE-like protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463369_35	UniRef90_A0A3D3Y6X7	335.0	0	FtsK domain-containing protein	N/A
eggNOG-mapper	UHGV-1463369_35	1002672.SAR11G3_00415	142.0	5.65e-36	DNA segregation ATPase FtsK SpoIIIE	N/A
PADLOC	UHGV-1463369_35	SspH_00004	71.9	5.6e-21	SspH	SSP
Pfam	UHGV-1463369_35	PF01580	N/A	N/A	FtsK/SpoIIIE family	FtsK_SpoIIIE
COG	UHGV-1463369_35	COG0733	N/A	N/A	Na+-dependent transporter, SNF family	N/A
structural_annotation	UHGV-1463369_35	PF01580,MF_00350,TIGR03925,COG4128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463369_37	1232436.CAPF01000086_gene855	55.8	0.000000598	N/A	N/A
structural_annotation	UHGV-1463369_38	PF17516	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463369_39	PF03869,NF010256	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463369_40	877421.AUJT01000054_gene66	57.0	0.0000000782	N/A	N/A
Pfam	UHGV-1463369_40	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1463369_41	phrog_38	197.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1463369_41	UniRef90_UPI000419A6BC	407.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1463369_41	1232453.BAIF02000058_gene1623	419.0	0	TIGRFAM Phage	N/A
NCBIFam	UHGV-1463369_41	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1463369_41	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463369_41	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_42	phrog_64	214.0	0	portal protein	head and packaging
UniRef90	UHGV-1463369_42	UniRef90_A0A3D3Y472	795.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1463369_42	1123263.AUKY01000015_gene1609	379.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1463369_42	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1463369_42	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_43	phrog_324	41.4	0.000000000016	head morphogenesis	head and packaging
UniRef90	UHGV-1463369_43	UniRef90_A0A3D3Y4T2	274.0	0	Phage_Mu_F domain-containing protein	N/A
Pfam	UHGV-1463369_43	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1463369_43	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1463369_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463369_43	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_46	phrog_544	71.3	1e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1463369_46	428127.EUBDOL_01555	246.0	0	N/A	N/A
structural_annotation	UHGV-1463369_46	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
Pfam	UHGV-1463369_47	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1463369_47	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463369_48	1298920.KI911353_gene2656	87.4	2.38e-20	N/A	N/A
eggNOG-mapper	UHGV-1463369_49	476272.RUMHYD_01963	78.6	5.64e-16	N/A	N/A
structural_annotation	UHGV-1463369_50	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463369_51	1298920.KI911353_gene2652	174.0	0	N/A	N/A
structural_annotation	UHGV-1463369_51	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463369_52	UniRef90_UPI001D0975F6	95.1	5.5e-23	N/A	N/A
eggNOG-mapper	UHGV-1463369_53	1121333.JMLH01000047_gene1011	52.0	0.000000547	N/A	N/A
PHROG	UHGV-1463369_54	phrog_1535	91.8	1.4e-28	tail length tape measure protein	tail
UniRef90	UHGV-1463369_54	UniRef90_A0A173WM72	111.0	1.76e-21	Phage-related protein	N/A
eggNOG-mapper	UHGV-1463369_54	1123263.AUKY01000015_gene1620	85.1	0.0000000000000529	Phage tail tape measure protein TP901	N/A
COG	UHGV-1463369_54	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-1463369_55	phrog_1194	80.3	2e-23	N/A	unknown function
eggNOG-mapper	UHGV-1463369_55	394503.Ccel_3034	75.1	8.39e-16	N/A	N/A
Pfam	UHGV-1463369_55	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1463369_55	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1463369_56	phrog_32308	66.7	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-1463369_56	1235797.C816_04180	67.0	0.00000000107	N/A	N/A
structural_annotation	UHGV-1463369_56	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-1463369_60	K16617	59.2	3.3e-17	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-1463369_60	phrog_6320	80.1	2.4e-23	tail fiber protein	tail
eggNOG-mapper	UHGV-1463369_60	1519439.JPJG01000060_gene1892	70.1	0.000000000893	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1463369_60	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1463369_60	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463369	Yes	34,727	52	78	1
UHGV-0148954	No	34,698	52	78	1
UHGV-1460768	No	34,602	52	78	1