vOTU vOTU-163106

vOTU: vOTU-163106

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-163106
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00004 → vGENUS-00082 → vOTU-163106
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Blautia_A
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1463943
Biosample ID	N/A
Genome length (bp)	23,985 bps
CheckV completeness	53.62% (Medium-quality)
CDS count	39
CDS density	91.73%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Blautia_A	Total connections	427	Host agreement	89.46
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 53.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1463943_1	phrog_1535	394.7	0	tail length tape measure protein	tail
UniRef90	UHGV-1463943_1	UniRef90_A0A173R880	631.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1463943_1	476272.RUMHYD_01785	657.0	0	phage tail tape measure protein	N/A
COG	UHGV-1463943_1	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463943_1	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463943_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_3	phrog_6616	487.3	0	tail protein	tail
UniRef90	UHGV-1463943_3	UniRef90_UPI001D0E203F	1251.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1463943_3	33035.JPJF01000043_gene1002	268.0	0	N/A	N/A
Pfam	UHGV-1463943_3	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1463943_3	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-1463943_4	K07273	203.5	0	acm; lysozyme	N/A
PHROG	UHGV-1463943_4	phrog_291	157.8	0	endolysin	lysis
UniRef90	UHGV-1463943_4	UniRef90_A0A317UBE2	901.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1463943_4	476272.RUMHYD_02876	253.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-1463943_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1463943_4	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1463943_4	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-1463943_4	PF01183,TIGR02594,TIGR04303,COG3757,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-1463943_5	K14059	105.8	6.3e-31	int; integrase	N/A
PHROG	UHGV-1463943_5	phrog_1	137.3	1.4e-40	integrase	integration and excision
UniRef90	UHGV-1463943_5	UniRef90_D4LPN8	682.0	0	Phage integrase family	N/A
eggNOG-mapper	UHGV-1463943_5	1235792.C808_05256	371.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1463943_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1463943_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1463943_5	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_6	phrog_8545	66.8	3e-19	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463943_6	UniRef90_UPI001C0EAFDF	278.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-1463943_6	1304866.K413DRAFT_0836	195.0	0	tRNA_anti-like	N/A
Pfam	UHGV-1463943_6	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-1463943_6	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-1463943_7	K07705	132.2	4e-39	lytT, lytR; two-component system, LytTR family, response regulator LytT	N/A
PHROG	UHGV-1463943_7	phrog_8810	128.5	5.5e-38	N/A	unknown function
UniRef90	UHGV-1463943_7	UniRef90_UPI001D0E4226	474.0	0	LytTR family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1463943_7	556261.HMPREF0240_03082	142.0	4.66e-39	response regulator	N/A
Pfam	UHGV-1463943_7	PF00072	N/A	N/A	Response regulator receiver domain	Response_reg
Pfam	UHGV-1463943_7	PF04397	N/A	N/A	LytTr DNA-binding domain	LytTR
COG	UHGV-1463943_7	COG3279	N/A	N/A	DNA-binding response regulator, LytR/AlgR family	N/A
structural_annotation	UHGV-1463943_7	PF04397,PF00072,MF_00981,NF010684,COG3279	N/A	N/A	N/A	N/A
KOfam	UHGV-1463943_9	K18830	62.8	5.2e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1463943_9	phrog_8	53.0	0.0000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-1463943_9	UniRef90_A0A1C6C9V1	129.0	2.25e-36	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-1463943_9	748224.HMPREF9436_01444	123.0	2.47e-34	N/A	N/A
PADLOC	UHGV-1463943_9	retron_type_VI_hth_cluster2_1	46.4	0.00000000000023	N/A	Retron
Pfam	UHGV-1463943_9	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1463943_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1463943_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463943_10	UniRef90_A0A1M6M2C3	76.3	3.41e-17	DNA binding domain-containing protein, excisionase family	N/A
eggNOG-mapper	UHGV-1463943_10	610130.Closa_1362	73.2	9.74e-17	Helix-turn-helix domain	N/A
Pfam	UHGV-1463943_10	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-1463943_10	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-1463943_10	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_12	phrog_6058	52.0	0.0000000000000069	N/A	unknown function
UniRef90	UHGV-1463943_12	UniRef90_A0A2V1JQ38	62.0	0.00000000018	Glycogen synthase	N/A
eggNOG-mapper	UHGV-1463943_12	742733.HMPREF9469_05094	60.1	0.000000000172	N/A	N/A
AcrCatalog	UHGV-1463943_13	cluster_17974	59.7	0.00000000000000139	NA	N/A
structural_annotation	UHGV-1463943_16	NF011879	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463943_17	UniRef90_R6RDX0	78.2	1.06e-17	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-1463943_18	phrog_2872	164.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463943_18	UniRef90_A0A8F2J9K2	297.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1463943_18	1304866.K413DRAFT_0827	224.0	0	AAA domain	N/A
Pfam	UHGV-1463943_18	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1463943_18	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_20	phrog_18107	127.7	8.9e-38	N/A	unknown function
eggNOG-mapper	UHGV-1463943_20	476272.RUMHYD_02831	192.0	0	N/A	N/A
structural_annotation	UHGV-1463943_20	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_21	phrog_3490	117.1	1.3e-34	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463943_21	UniRef90_A0A173R9N6	277.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1463943_21	476272.RUMHYD_02832	277.0	0	ERCC4 domain	N/A
Pfam	UHGV-1463943_21	PF02732	N/A	N/A	ERCC4 domain	ERCC4
COG	UHGV-1463943_21	COG1948	N/A	N/A	ERCC4-type crossover junction endonuclease	N/A
structural_annotation	UHGV-1463943_21	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_23	phrog_1313	381.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1463943_23	UniRef90_UPI001655DAE1	709.0	0	bifunctional DNA primase/polymerase	N/A
eggNOG-mapper	UHGV-1463943_23	500632.CLONEX_03568	306.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1463943_23	PF09250	N/A	N/A	Bifunctional DNA primase/polymerase, N-terminal	Prim-Pol
Pfam	UHGV-1463943_23	PF08708	N/A	N/A	Primase C terminal 1 (PriCT-1)	PriCT_1
Pfam	UHGV-1463943_23	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1463943_23	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1463943_23	PF05272,PF09250,PF08708,MF_00016,NF011296,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_25	phrog_3502	43.2	0.0000000000074	N/A	unknown function
UniRef90	UHGV-1463943_25	UniRef90_A0A412EKY9	93.6	3.62e-23	Winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1463943_25	525256.HMPREF0091_10731	49.7	0.00000726	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1463943_25	PF01726	N/A	N/A	LexA DNA binding domain	LexA_DNA_bind
COG	UHGV-1463943_25	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1463943_25	PF01726,MF_00732,TIGR00738,COG0640	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463943_26	PF04936	N/A	N/A	N/A	N/A
KOfam	UHGV-1463943_28	K19779	53.8	0.0000000000000028	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-1463943_28	phrog_599	60.0	5.8e-17	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1463943_28	UniRef90_A0A317UED7	126.0	1.3e-36	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-1463943_28	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1463943_28	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1463943_28	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1463943_28	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_29	phrog_4601	44.4	0.0000000000019	N/A	unknown function
structural_annotation	UHGV-1463943_29	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-1463943_31	phrog_9298	373.2	0	radical SAM domain protein	other
UniRef90	UHGV-1463943_31	UniRef90_UPI00156DBFFE	535.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1463943_31	1235793.C809_02647	435.0	0	N/A	N/A
COG	UHGV-1463943_31	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1463943_31	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463943_32	476272.RUMHYD_01751	48.1	0.00000901	N/A	N/A
AcrCatalog	UHGV-1463943_32	cluster_11670	44.3	0.0000000111	NA	N/A
PHROG	UHGV-1463943_34	phrog_20593	87.8	7.7e-26	N/A	unknown function
PHROG	UHGV-1463943_35	phrog_8684	88.4	1.8e-26	N/A	unknown function
UniRef90	UHGV-1463943_35	UniRef90_UPI001C0EA8EC	171.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1463943_35	411470.RUMGNA_02199	82.8	2.39e-18	N/A	N/A
Pfam	UHGV-1463943_35	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1463943_35	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1463943_35	PF09643,TIGR01671	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1463943_38	397290.C810_01492	52.4	0.000000805	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463943	Yes	23,985	41	54	1