vOTU vOTU-163565

vOTU: vOTU-163565

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-163565
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00269 → vOTU-163565
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1538488
Biosample ID	N/A
Genome length (bp)	25,028 bps
CheckV completeness	76.96% (Medium-quality)
CDS count	36
CDS density	92.75%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 76.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1538488_1	K22300	60.6	2.3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1538488_1	phrog_8	60.9	3e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1538488_1	655812.HMPREF0061_1217	71.6	0.00000000000238	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1538488_1	retron_type_VI_hth_cluster2_1	41.1	0.000000000025	N/A	Retron
Pfam	UHGV-1538488_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1538488_1	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
UniRef90	UHGV-1538488_2	UniRef90_UPI001D149C93	94.0	1.6e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1538488_2	170187.SP_1131	62.0	0.0000000000223	TRANSCRIPTIONal	N/A
COG	UHGV-1538488_2	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1538488_2	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1538488_3	UniRef90_UPI001F20A5E6	100.0	1.18e-25	helix-turn-helix domain-containing protein	N/A
PHROG	UHGV-1538488_4	phrog_6493	112.6	3.4e-33	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538488_4	UniRef90_UPI0013A69265	102.0	4.36e-25	DnaD domain protein	N/A
eggNOG-mapper	UHGV-1538488_4	1117379.BABA_01430	107.0	2.51e-27	Conserved phage C-terminus (Phg_2220_C)	N/A
COG	UHGV-1538488_4	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-1538488_7	phrog_864	254.5	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538488_7	UniRef90_UPI00066C8BF4	1456.0	0	phage/plasmid primase, P4 family	N/A
eggNOG-mapper	UHGV-1538488_7	883112.HMPREF9707_01481	494.0	0	DNA primase	N/A
Pfam	UHGV-1538488_7	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1538488_7	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-1538488_7	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1538488_7	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1538488_7	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
COG	UHGV-1538488_8	COG0677	N/A	N/A	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	N/A
PHROG	UHGV-1538488_9	phrog_248	59.8	5.9e-17	transcriptional activator	transcription regulation
Pfam	UHGV-1538488_9	PF04297	N/A	N/A	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
COG	UHGV-1538488_10	COG2124	N/A	N/A	Cytochrome P450	N/A
eggNOG-mapper	UHGV-1538488_11	1403946.Q615_SPAC00135G0027	52.8	0.00000543	N/A	N/A
PHROG	UHGV-1538488_14	phrog_17688	481.3	0	N/A	unknown function
UniRef90	UHGV-1538488_14	UniRef90_A0A420YQU1	832.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1538488_14	585203.SMSK564_1286	815.0	0	phage terminase, large subunit	N/A
COG	UHGV-1538488_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1538488_14	PF20441,PF03354,MF_04146,NF033889,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_15	phrog_233	114.0	1.8e-33	head scaffolding protein	head and packaging
UniRef90	UHGV-1538488_15	UniRef90_A0A420YQU4	205.0	0	Phage scaffold protein	N/A
eggNOG-mapper	UHGV-1538488_15	1069534.LRC_07270	123.0	9.3e-34	N/A	N/A
Pfam	UHGV-1538488_15	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1538488_15	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_16	phrog_32396	160.4	0	N/A	unknown function
UniRef90	UHGV-1538488_16	UniRef90_A0A420YQN7	521.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1538488_16	1121864.OMO_02152	412.0	0	Phage capsid family	N/A
Pfam	UHGV-1538488_16	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1538488_16	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1538488_16	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_18	phrog_137	114.6	4.7e-34	head-tail adaptor Ad1	connector
UniRef90	UHGV-1538488_18	UniRef90_UPI001C3E6F4D	187.0	0	phage Gp19/Gp15/Gp42 family protein	N/A
eggNOG-mapper	UHGV-1538488_18	1121864.OMO_02154	174.0	0	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-1538488_18	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-1538488_18	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_19	phrog_501	98.0	7.1e-29	head closure Hc1	connector
UniRef90	UHGV-1538488_19	UniRef90_A0A139QHM6	149.0	1.4013e-44	Phage-associated protein	N/A
eggNOG-mapper	UHGV-1538488_19	938288.HG326226_gene865	150.0	0	N/A	N/A
structural_annotation	UHGV-1538488_19	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_20	phrog_387	83.4	1.8e-24	neck protein	connector
UniRef90	UHGV-1538488_20	UniRef90_A0A380KNT4	84.3	9.05e-20	N/A	N/A
eggNOG-mapper	UHGV-1538488_20	1121864.OMO_02156	83.2	4.23e-20	N/A	N/A
PHROG	UHGV-1538488_21	phrog_123	48.2	0.0000000000002	tail terminator	connector
UniRef90	UHGV-1538488_21	UniRef90_D2BQF4	139.0	9.18005e-41	N/A	N/A
eggNOG-mapper	UHGV-1538488_21	12390.Q77MU8_9CAUD	137.0	8.88998e-41	N/A	N/A
structural_annotation	UHGV-1538488_21	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_22	phrog_117	161.9	0	major tail protein	tail
UniRef90	UHGV-1538488_22	UniRef90_A0A420YQM1	283.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1538488_22	1121864.OMO_02158	227.0	0	domain, Protein	N/A
COG	UHGV-1538488_22	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538488_22	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_23	phrog_1526	95.1	4.4e-28	N/A	unknown function
UniRef90	UHGV-1538488_23	UniRef90_A0A4U9XM96	89.0	2.15e-21	N/A	N/A
eggNOG-mapper	UHGV-1538488_23	1121864.OMO_02159	103.0	5.9e-28	N/A	N/A
PHROG	UHGV-1538488_24	phrog_1633	169.3	0	N/A	unknown function
UniRef90	UHGV-1538488_24	UniRef90_A0A139QHL2	139.0	5.74e-40	N/A	N/A
eggNOG-mapper	UHGV-1538488_24	873448.STRPO_0293	137.0	2.51001e-40	N/A	N/A
Pfam	UHGV-1538488_24	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-1538488_24	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_25	phrog_58	388.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1538488_25	UniRef90_E1LN07	565.0	0	PblA, putative	N/A
eggNOG-mapper	UHGV-1538488_25	585203.SMSK564_1276	565.0	0	phage tail tape measure protein	N/A
COG	UHGV-1538488_25	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538488_25	PF20155	N/A	N/A	N/A	N/A
UniRef90	UHGV-1538488_26	UniRef90_UPI00094EB956	394.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1538488_26	768726.HMPREF9178_1053	392.0	0	N/A	N/A
COG	UHGV-1538488_26	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1538488_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_27	phrog_2270	761.8	0	N/A	unknown function
UniRef90	UHGV-1538488_27	UniRef90_A0A081PN56	901.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1538488_27	768726.HMPREF9178_1052	656.0	0	N/A	N/A
Pfam	UHGV-1538488_27	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1538488_27	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1538488_27	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1538488_27	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-1538488_28	K08131	63.2	1.4e-18	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-1538488_28	phrog_6049	112.8	8.9e-39	tail fiber protein	tail
UniRef90	UHGV-1538488_28	UniRef90_A0A0T8EK93	167.0	0	Hyaluronoglucosaminidase	N/A
eggNOG-mapper	UHGV-1538488_28	482234.SCAZ3_03785	84.7	6.54e-17	translation initiation factor activity	N/A
Pfam	UHGV-1538488_28	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
Pfam	UHGV-1538488_28	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1538488_28	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1538488_28	PF18454	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_29	phrog_34743	42.9	0.0000000000078	N/A	unknown function
structural_annotation	UHGV-1538488_29	NF009632	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_30	phrog_7841	385.9	0	N/A	unknown function
UniRef90	UHGV-1538488_30	UniRef90_UPI001C96550A	77.8	0.00000000000706	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1538488_30	1005705.HMPREF9967_1053	180.0	0	domain protein	N/A
Pfam	UHGV-1538488_30	PF07902	N/A	N/A	gp58-like protein	Gp58
COG	UHGV-1538488_30	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538488_30	PF20132	N/A	N/A	N/A	N/A
UniRef90	UHGV-1538488_31	UniRef90_F5W039	73.9	1.35e-16	Conserved domain protein	N/A
PHROG	UHGV-1538488_32	phrog_1554	207.5	0	N/A	unknown function
UniRef90	UHGV-1538488_32	UniRef90_A0A359YI08	165.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538488_32	1005705.HMPREF9967_1055	338.0	0	N/A	N/A
structural_annotation	UHGV-1538488_32	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_33	phrog_199	63.4	2.7e-18	holin	lysis
UniRef90	UHGV-1538488_33	UniRef90_UPI0008A4204D	256.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1538488_33	638301.HMPREF0444_1493	190.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1538488_33	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1538488_33	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1538488_33	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1538488_34	phrog_10091	80.6	1.8e-23	holin	lysis
UniRef90	UHGV-1538488_34	UniRef90_UPI0008A4D2A5	153.0	0	phage holin	N/A
eggNOG-mapper	UHGV-1538488_34	638301.HMPREF0444_1492	150.0	0	Holin, phage phi LC3 family	N/A
Pfam	UHGV-1538488_34	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1538488_34	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1538488_34	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1538488_34	COG5546	N/A	N/A	N/A	N/A
KOfam	UHGV-1538488_35	K10062	84.8	5.4e-25	COLEC12; collectin sub-family member 12	N/A
PHROG	UHGV-1538488_35	phrog_32123	521.7	0	N/A	unknown function
UniRef90	UHGV-1538488_35	UniRef90_UPI001CED1953	585.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1538488_35	997830.HMPREF1124_0614	505.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-1538488_35	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1538488_35	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1538488_35	PF10651,NF032891	N/A	N/A	N/A	N/A
KOfam	UHGV-1538488_36	K01447	60.7	2.8e-17	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1538488_36	phrog_1110	323.6	0	endolysin	lysis
UniRef90	UHGV-1538488_36	UniRef90_A0A0F3HHG8	379.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1538488_36	768726.HMPREF9178_1047	340.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1538488_36	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1538488_36	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1538488_36	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1538488_36	PF19127,PF01510,TIGR04035,COG5263	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1538488	Yes	25,028	37	77	1