vOTU vOTU-163701

vOTU: vOTU-163701

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-163701
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01464 → vGENUS-01468 → vOTU-163701
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0021368
Biosample ID	SAMEA4765655
Genome length (bp)	23,701 bps
CheckV completeness	68.03% (Medium-quality)
CDS count	30
CDS density	95.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	203	Host agreement	99.01
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0021368_1	K07505	401.5	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0021368_1	phrog_2597	1023.4	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021368_1	UniRef90_A0A0J1INS8	903.0	0	PriCT_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021368_1	1232449.BAHV02000008_gene621	885.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0021368_1	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0021368_1	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0021368_1	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0021368_2	K01160	49.6	0.00000000000011	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0021368_2	phrog_140	89.3	4.8e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021368_2	UniRef90_R6ING7	159.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0021368_2	1262914.BN533_01944	159.0	0	crossover junction endodeoxyribonuclease	N/A
Pfam	UHGV-0021368_2	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0021368_2	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0021368_2	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_4	phrog_36	53.5	0.000000000000005	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021368_4	UniRef90_UPI001D0837DD	119.0	1.09e-31	N/A	N/A
structural_annotation	UHGV-0021368_4	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0021368_5	K06909	394.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0021368_5	phrog_5653	145.3	1.59748e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0021368_5	UniRef90_A0A416S378	637.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0021368_5	33035.JPJF01000106_gene3136	601.0	0	Terminase small subunit	N/A
Pfam	UHGV-0021368_5	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0021368_5	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0021368_5	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0021368_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0021368_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0021368_5	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_6	phrog_1233	95.2	7e-28	N/A	unknown function
eggNOG-mapper	UHGV-0021368_6	1415774.U728_832	93.2	3.72e-23	N/A	N/A
structural_annotation	UHGV-0021368_6	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_7	phrog_533	213.5	0	portal protein	head and packaging
UniRef90	UHGV-0021368_7	UniRef90_A0A173TY48	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0021368_7	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0021368_7	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_8	phrog_581	254.7	0	minor head protein	head and packaging
UniRef90	UHGV-0021368_8	UniRef90_A0A355KVT5	338.0	0	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0021368_8	476272.RUMHYD_01761	223.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0021368_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0021368_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021368_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_9	phrog_194	42.7	0.0000000000094	head scaffolding protein	head and packaging
UniRef90	UHGV-0021368_9	UniRef90_UPI001C0EBA51	127.0	3.38e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0021368_9	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-0021368_9	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0021368_9	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_10	phrog_267	54.4	0.0000000000000017	major head protein	head and packaging
eggNOG-mapper	UHGV-0021368_10	1235799.C818_04223	159.0	3.50325e-44	N/A	N/A
structural_annotation	UHGV-0021368_10	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_11	phrog_541	68.9	6.6e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0021368_11	476272.RUMHYD_01778	74.3	0.0000000000000111	N/A	N/A
PHROG	UHGV-0021368_12	phrog_3366	52.0	0.000000000000013	N/A	unknown function
structural_annotation	UHGV-0021368_12	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_13	phrog_556	60.3	1.9e-17	minor head protein	head and packaging
UniRef90	UHGV-0021368_13	UniRef90_A0A1H7MNM8	141.0	4.63999e-40	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0021368_13	33035.JPJF01000106_gene3128	85.1	7.78e-19	N/A	N/A
Pfam	UHGV-0021368_13	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0021368_13	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_14	phrog_3266	65.8	5.5e-19	tail completion	connector
eggNOG-mapper	UHGV-0021368_14	476272.RUMHYD_01781	120.0	1.92e-32	N/A	N/A
structural_annotation	UHGV-0021368_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_15	phrog_3099	88.6	7.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0021368_15	693746.OBV_18150	224.0	0	N/A	N/A
structural_annotation	UHGV-0021368_15	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_16	phrog_11299	99.5	3.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0021368_16	1449050.JNLE01000003_gene3883	66.2	0.0000000000104	N/A	N/A
structural_annotation	UHGV-0021368_16	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_17	phrog_706	108.4	6.1e-32	N/A	unknown function
UniRef90	UHGV-0021368_17	UniRef90_UPI00164D7633	175.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0021368_17	693746.OBV_18170	168.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0021368_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0021368_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_18	phrog_1535	120.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0021368_18	UniRef90_A0A810PX76	107.0	1.84e-20	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0021368_18	1235797.C816_04182	196.0	0	SLT domain	N/A
COG	UHGV-0021368_18	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021368_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_20	phrog_6616	74.0	2.4e-22	tail protein	tail
structural_annotation	UHGV-0021368_20	PF13550,PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_21	phrog_24267	91.9	9.7e-27	N/A	unknown function
UniRef90	UHGV-0021368_21	UniRef90_UPI001373A0FD	131.0	1.34e-29	N/A	N/A
eggNOG-mapper	UHGV-0021368_21	742742.HMPREF9452_00376	131.0	1.97e-34	tail collar domain protein	N/A
COG	UHGV-0021368_21	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0021368_23	phrog_30034	112.2	6e-33	N/A	unknown function
UniRef90	UHGV-0021368_23	UniRef90_A0A3D1XGA4	221.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021368_23	411471.SUBVAR_06976	90.1	1.18e-20	N/A	N/A
Pfam	UHGV-0021368_23	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
KOfam	UHGV-0021368_24	K01447	66.7	4.4e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0021368_24	phrog_1794	143.1	2.59941e-42	amidase	lysis
UniRef90	UHGV-0021368_24	UniRef90_R5AZE6	296.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0021368_24	1235793.C809_04312	204.0	0	Ami_2	N/A
Pfam	UHGV-0021368_24	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0021368_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0021368_24	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_25	phrog_4105	77.4	1.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0021368_25	592026.GCWU0000282_003290	82.8	3.37e-19	N/A	N/A
PHROG	UHGV-0021368_26	phrog_1129	61.3	1.2e-17	holin	lysis
UniRef90	UHGV-0021368_26	UniRef90_A0A8J6J3M3	103.0	4.8e-27	Phage holin family protein	N/A
eggNOG-mapper	UHGV-0021368_26	742740.HMPREF9474_03522	95.1	1.31e-24	N/A	N/A
Pfam	UHGV-0021368_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0021368_26	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0021368_29	phrog_25567	40.0	0.000000000049	N/A	unknown function
UniRef90	UHGV-0021368_29	UniRef90_UPI00164AED9E	86.3	1.01e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0021368_29	1235798.C817_04600	82.4	5.41e-19	N/A	N/A
structural_annotation	UHGV-0021368_29	NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021368_30	UniRef90_A0A415ZLW7	53.9	0.0000000915	DNA-binding response regulator	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021368	Yes	23,701	57	68	1