vOTU vOTU-163736

vOTU: vOTU-163736

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-163736
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00087 → vGENUS-00253 → vOTU-163736
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0366325
Biosample ID	N/A
Genome length (bp)	29,824 bps
CheckV completeness	81.50% (Medium-quality)
CDS count	41
CDS density	93.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	120	Host agreement	95
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	115	Host agreement	78.26

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 81.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0366325_2	633147.Olsu_1237	53.1	0.0000000103	N/A	N/A
KOfam	UHGV-0366325_3	K01447	110.2	2.5e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0366325_3	phrog_1493	125.8	1.7e-37	endolysin	lysis
UniRef90	UHGV-0366325_3	UniRef90_A0A1Q6MQM1	281.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0366325_3	1235802.C823_05611	190.0	0	Ami_2	N/A
Pfam	UHGV-0366325_3	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0366325_3	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0366325_3	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0366325_3	PF01510,PF01471,MF_04111,NF008758,COG5632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_4	phrog_774	57.7	2.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0366325_4	397290.C810_05225	79.3	2.85e-18	N/A	N/A
PHROG	UHGV-0366325_5	phrog_199	59.6	3.8e-17	holin	lysis
UniRef90	UHGV-0366325_5	UniRef90_E2NRB7	286.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0366325_5	742723.HMPREF9477_00889	188.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0366325_5	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0366325_5	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0366325_5	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0366325_5	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_6	phrog_372	208.6	0	tail protein	tail
UniRef90	UHGV-0366325_6	UniRef90_UPI0006C32325	1074.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_6	1211844.CBLM010000016_gene1479	201.0	0	N/A	N/A
Pfam	UHGV-0366325_6	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0366325_6	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_7	phrog_18110	42.1	0.0000000000085	N/A	unknown function
eggNOG-mapper	UHGV-0366325_7	411465.PEPMIC_00746	88.6	3.53e-17	Prophage endopeptidase tail	N/A
COG	UHGV-0366325_7	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0366325_8	phrog_30133	112.8	3e-33	virion structural protein	head and packaging
UniRef90	UHGV-0366325_8	UniRef90_I7ARM6	301.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_8	1504823.CCMM01000008_gene1029	312.0	0	N/A	N/A
structural_annotation	UHGV-0366325_8	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_9	phrog_15074	59.4	1.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-0366325_9	445974.CLORAM_02919	464.0	0	cellulase activity	N/A
COG	UHGV-0366325_9	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0366325_9	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_10	phrog_1194	84.7	8.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0366325_10	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-0366325_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0366325_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_11	phrog_1535	324.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0366325_11	UniRef90_A0A6N9L4U2	1450.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0366325_11	650150.ERH_0621	345.0	0	tape measure	N/A
Pfam	UHGV-0366325_11	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0366325_11	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0366325_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0366325_12	phrog_183	54.1	0.0000000000000029	tail chaperone protein	tail
UniRef90	UHGV-0366325_12	UniRef90_UPI0011C9B36A	216.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_12	445974.CLORAM_02923	112.0	2.17e-30	N/A	N/A
Pfam	UHGV-0366325_12	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0366325_12	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_13	phrog_158	71.9	1.2e-20	major tail protein	tail
UniRef90	UHGV-0366325_13	UniRef90_A0A6N9L2K6	258.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0366325_13	445974.CLORAM_02924	174.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0366325_13	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0366325_13	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_14	phrog_78	60.4	3.4e-17	tail terminator	connector
eggNOG-mapper	UHGV-0366325_14	1504823.CCMM01000008_gene1036	142.0	2.13978e-42	N/A	N/A
structural_annotation	UHGV-0366325_14	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_15	phrog_5	71.3	1.7e-20	tail completion or Neck1 protein	connector
UniRef90	UHGV-0366325_15	UniRef90_A0A6N9L3B6	339.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0366325_15	742733.HMPREF9469_01819	151.0	2.38221e-44	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0366325_15	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0366325_15	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0366325_15	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_16	phrog_2168	90.5	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0366325_16	1280689.AUJC01000003_gene969	78.2	2.52e-17	N/A	N/A
structural_annotation	UHGV-0366325_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_17	phrog_132	43.3	0.0000000000054	head-tail adaptor	connector
UniRef90	UHGV-0366325_17	UniRef90_UPI001C101B39	50.4	0.00000816	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0366325_17	1235800.C819_00483	54.3	0.0000000635	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0366325_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0366325_17	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_18	phrog_2724	63.1	4.8e-18	N/A	unknown function
UniRef90	UHGV-0366325_18	UniRef90_A0A6N9L4P9	158.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-0366325_18	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-0366325_18	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-0366325_18	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_19	phrog_422	298.9	0	major head protein	head and packaging
UniRef90	UHGV-0366325_19	UniRef90_A0A2H4JCM6	302.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-0366325_19	1211844.CBLM010000016_gene1491	307.0	0	N/A	N/A
structural_annotation	UHGV-0366325_19	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_20	phrog_172	157.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0366325_20	UniRef90_A0A6N9L4V5	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_20	445974.CLORAM_02931	126.0	8.59e-34	N/A	N/A
Pfam	UHGV-0366325_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0366325_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_21	phrog_30609	66.3	5.1e-19	N/A	unknown function
structural_annotation	UHGV-0366325_21	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_22	phrog_3675	113.5	7.8e-34	N/A	unknown function
UniRef90	UHGV-0366325_22	UniRef90_A0A0E4H649	118.0	3.6e-32	YjcQ protein	N/A
eggNOG-mapper	UHGV-0366325_22	1120978.KB894082_gene1061	139.0	3.56995e-41	YjcQ protein	N/A
Pfam	UHGV-0366325_22	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0366325_22	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_23	phrog_35328	70.3	2.5e-20	N/A	unknown function
PHROG	UHGV-0366325_24	phrog_115	333.6	0	minor head protein	head and packaging
UniRef90	UHGV-0366325_24	UniRef90_UPI001C387790	1040.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0366325_24	1504823.CCMM01000008_gene1046	291.0	0	cell adhesion	N/A
Pfam	UHGV-0366325_24	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0366325_24	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0366325_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0366325_24	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_25	phrog_64	391.7	0	portal protein	head and packaging
UniRef90	UHGV-0366325_25	UniRef90_A0A6N9L3D6	899.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0366325_25	445974.CLORAM_02935	479.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0366325_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0366325_25	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0366325_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0366325_26	K06909	364.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0366325_26	phrog_3717	165.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0366325_26	UniRef90_A0A6N9L4W9	800.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0366325_26	445974.CLORAM_02936	740.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0366325_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0366325_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0366325_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0366325_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0366325_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_27	phrog_2412	85.0	8e-25	N/A	unknown function
UniRef90	UHGV-0366325_27	UniRef90_UPI001C38E948	225.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0366325_27	1125712.HMPREF1316_1524	64.3	0.0000000000178	N/A	N/A
Pfam	UHGV-0366325_27	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
structural_annotation	UHGV-0366325_27	PF18932	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_28	phrog_9479	136.6	1.2e-40	N/A	unknown function
structural_annotation	UHGV-0366325_28	PF15529	N/A	N/A	N/A	N/A
KOfam	UHGV-0366325_30	K03497	57.2	3.5e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0366325_30	phrog_940	384.3	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0366325_30	UniRef90_R6DKE7	440.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0366325_30	1232449.BAHV02000018_gene1534	414.0	0	N/A	N/A
PADLOC	UHGV-0366325_30	MTase_II_00015	88.3	1.2e-25	Type II methyltransferase	RM
Pfam	UHGV-0366325_30	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0366325_30	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0366325_30	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0366325_30	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_31	phrog_36	54.1	0.0000000000000034	transcriptional regulator	transcription regulation
Pfam	UHGV-0366325_31	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0366325_31	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0366325_31	PF08281,MF_00674,NF007227,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_32	phrog_190	133.3	1.5e-39	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0366325_32	UniRef90_UPI0006C03F37	205.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_32	525255.HMPREF0077_0413	99.8	1.14e-25	N/A	N/A
Pfam	UHGV-0366325_32	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0366325_32	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0366325_33	K03111	148.6	6.02558e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0366325_33	phrog_44	154.4	0	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0366325_33	UniRef90_UPI0006C3F2C5	262.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0366325_33	428126.CLOSPI_02450	164.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0366325_33	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0366325_33	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0366325_33	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0366325_33	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0366325_33	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_37	phrog_22292	122.2	2.8e-36	N/A	unknown function
eggNOG-mapper	UHGV-0366325_37	1336234.JAGN01000004_gene538	61.6	0.000000000881	N/A	N/A
PHROG	UHGV-0366325_39	phrog_2514	58.8	1.7e-17	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0366325_39	UniRef90_UPI001C395B09	276.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0366325_39	1140002.I570_01458	61.2	0.0000000405	DnaD domain protein	N/A
COG	UHGV-0366325_39	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0366325_39	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0366325_40	K07455	210.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0366325_40	phrog_148	226.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0366325_40	UniRef90_A0A6N9L4X4	601.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0366325_40	1095750.HMPREF9970_1675	367.0	0	RecT family	N/A
Pfam	UHGV-0366325_40	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0366325_40	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0366325_40	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0366325_40	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0366325_41	phrog_674	84.0	2.2e-24	N/A	unknown function
UniRef90	UHGV-0366325_41	UniRef90_A0A6N9L4W2	713.0	0	N/A	N/A
eggNOG-mapper	UHGV-0366325_41	1234679.BN424_3317	67.8	0.00000000123	N/A	N/A
Pfam	UHGV-0366325_41	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0366325_41	PF07083	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0366325	Yes	29,824	38	82	1