vOTU vOTU-164326

vOTU: vOTU-164326

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-164326
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vOTU-164326
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0013955
Biosample ID	SAMEA4765516
Genome length (bp)	30,515 bps
CheckV completeness	72.32% (Medium-quality)
CDS count	54
CDS density	96.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	29	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.32)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0013955_1	1519439.JPJG01000060_gene1892	97.1	4.28e-18	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0013955_1	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
UniRef90	UHGV-0013955_3	UniRef90_A0A856HZ25	206.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0013955_3	1235797.C816_04179	159.0	8.94028e-42	Chaperone of endosialidase	N/A
PHROG	UHGV-0013955_4	phrog_6616	40.3	0.000000000019	tail protein	tail
UniRef90	UHGV-0013955_4	UniRef90_A0A2Z4QA17	172.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0013955_4	1232443.BAIA02000078_gene16	152.0	5.04467e-43	N/A	N/A
structural_annotation	UHGV-0013955_4	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_5	phrog_1194	91.1	8.5e-27	N/A	unknown function
UniRef90	UHGV-0013955_5	UniRef90_A0A0R1VMM5	55.1	0.000000218	N/A	N/A
eggNOG-mapper	UHGV-0013955_5	60520.HR47_13415	56.6	0.0000000093	N/A	N/A
Pfam	UHGV-0013955_5	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0013955_5	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_6	phrog_1535	156.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0013955_6	UniRef90_A0A1C6JAZ8	363.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0013955_6	1232443.BAIA02000078_gene18	170.0	5.40999e-41	phage tail tape measure protein	N/A
COG	UHGV-0013955_6	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_7	phrog_706	119.7	2.3e-35	N/A	unknown function
UniRef90	UHGV-0013955_7	UniRef90_UPI00164D7633	219.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0013955_7	693746.OBV_18170	203.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0013955_7	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0013955_7	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_8	phrog_374	186.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013955_8	UniRef90_A6BES1	181.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-0013955_8	411462.DORLON_00791	181.0	0	N/A	N/A
structural_annotation	UHGV-0013955_8	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_9	phrog_11299	72.2	8.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0013955_9	693746.OBV_18160	181.0	0	N/A	N/A
structural_annotation	UHGV-0013955_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_10	phrog_3099	68.3	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0013955_10	1232443.BAIA02000078_gene23	142.0	1.50001e-40	N/A	N/A
structural_annotation	UHGV-0013955_10	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_11	phrog_3266	45.8	0.00000000000078	tail completion	connector
eggNOG-mapper	UHGV-0013955_11	1232443.BAIA02000078_gene24	174.0	0	N/A	N/A
structural_annotation	UHGV-0013955_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_12	phrog_556	67.4	2e-19	minor head protein	head and packaging
UniRef90	UHGV-0013955_12	UniRef90_UPI00195E1497	191.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0013955_12	1226322.HMPREF1545_00054	154.0	0	Minor capsid protein	N/A
Pfam	UHGV-0013955_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0013955_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_13	phrog_3366	100.7	1.2e-29	N/A	unknown function
eggNOG-mapper	UHGV-0013955_13	1226322.HMPREF1545_00053	184.0	0	N/A	N/A
structural_annotation	UHGV-0013955_13	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_14	phrog_541	107.1	1.1e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0013955_14	642492.Clole_0822	60.8	0.000000000645	N/A	N/A
PHROG	UHGV-0013955_15	phrog_544	182.8	0	major head protein	head and packaging
UniRef90	UHGV-0013955_15	UniRef90_A0A810PZM2	685.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0013955_15	1347392.CCEZ01000005_gene1236	278.0	0	N/A	N/A
Pfam	UHGV-0013955_15	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0013955_15	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013955_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_17	phrog_581	289.1	0	minor head protein	head and packaging
UniRef90	UHGV-0013955_17	UniRef90_A0A1C5N7V1	474.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0013955_17	1226322.HMPREF1545_00046	366.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0013955_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0013955_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013955_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_18	phrog_8680	234.5	0	N/A	unknown function
UniRef90	UHGV-0013955_18	UniRef90_A0A3R6D7I3	263.0	0	N/A	N/A
eggNOG-mapper	UHGV-0013955_18	411470.RUMGNA_02208	243.0	0	N/A	N/A
Pfam	UHGV-0013955_18	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0013955_18	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_20	phrog_533	391.7	0	portal protein	head and packaging
UniRef90	UHGV-0013955_20	UniRef90_A0A1C5N775	587.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0013955_20	1226322.HMPREF1545_00044	548.0	0	N/A	N/A
Pfam	UHGV-0013955_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0013955_20	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0013955_21	K06909	114.8	8.2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0013955_21	phrog_2	85.3	1.1e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0013955_21	UniRef90_A0A0X8VAD6	441.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0013955_21	1449050.JNLE01000003_gene3895	423.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0013955_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0013955_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0013955_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0013955_21	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0013955_22	UniRef90_UPI0018A8F249	192.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0013955_22	1235790.C805_00037	121.0	2.56e-33	N/A	N/A
Pfam	UHGV-0013955_22	PF04218	N/A	N/A	CENP-B N-terminal DNA-binding domain	CENP-B_N
structural_annotation	UHGV-0013955_22	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_23	phrog_8	45.2	0.0000000000021	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013955_23	UniRef90_UPI0018989C77	77.8	8.15e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0013955_23	997346.HMPREF9374_3914	59.7	0.000000000125	sequence-specific DNA binding	N/A
Pfam	UHGV-0013955_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0013955_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0013955_25	phrog_801	72.8	6.2e-21	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0013955_25	UniRef90_A0A7G6E7Z0	107.0	4.56e-28	N/A	N/A
eggNOG-mapper	UHGV-0013955_25	1366055.S5MLS6_9CAUD	70.9	0.000000000000139	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-0013955_25	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0013955_25	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_27	phrog_1770	52.5	0.0000000000000099	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0013955_27	536233.CLO_1822	154.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0013955_27	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_29	phrog_22543	45.9	0.000000000001	N/A	unknown function
UniRef90	UHGV-0013955_29	UniRef90_A0A8D9PDT5	53.9	0.000000356	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0013955_32	phrog_38832	52.5	0.0000000000000024	N/A	unknown function
eggNOG-mapper	UHGV-0013955_32	665956.HMPREF1032_00143	61.6	0.00000000189	N/A	N/A
PHROG	UHGV-0013955_35	phrog_1384	119.4	2.7e-35	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0013955_35	665956.HMPREF1032_03086	281.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0013955_35	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
UniRef90	UHGV-0013955_36	UniRef90_UPI0019085A43	53.5	0.00000637	N/A	N/A
Pfam	UHGV-0013955_36	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0013955_36	NF041588	N/A	N/A	N/A	N/A
Pfam	UHGV-0013955_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0013955_37	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_39	phrog_1408	76.9	3e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0013955_39	742740.HMPREF9474_03117	174.0	0	N/A	N/A
structural_annotation	UHGV-0013955_39	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0013955_40	K03111	137.9	1.10001e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0013955_40	phrog_44	140.5	9.80068e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013955_40	UniRef90_R5ICL5	181.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0013955_40	693746.OBV_19910	171.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0013955_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0013955_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0013955_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0013955_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0013955_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_41	phrog_7370	57.8	1.6e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013955_41	UniRef90_A0A3D0LZU3	122.0	2.77e-34	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0013955_41	445972.ANACOL_01826	94.0	7.72e-24	HNH nucleases	N/A
Pfam	UHGV-0013955_41	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0013955_42	phrog_72	65.3	6e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013955_42	UniRef90_A0A8D9PDS2	169.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0013955_42	445972.ANACOL_01825	142.0	1.63e-40	N/A	N/A
structural_annotation	UHGV-0013955_42	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_43	phrog_14970	188.5	0	N/A	unknown function
UniRef90	UHGV-0013955_43	UniRef90_UPI00123F00F5	146.0	7.05999e-40	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0013955_43	397291.C804_03856	153.0	5.91348e-43	double-strand break repair protein	N/A
Pfam	UHGV-0013955_43	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0013955_43	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0013955_43	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
Pfam	UHGV-0013955_45	PF00412	N/A	N/A	LIM domain	LIM
structural_annotation	UHGV-0013955_45	PF09943	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_46	phrog_6631	67.6	1.8e-19	N/A	unknown function
UniRef90	UHGV-0013955_46	UniRef90_UPI00164E6E61	99.4	3.79e-22	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0013955_46	1226322.HMPREF1545_00012	107.0	1.89e-26	3D domain	N/A
Pfam	UHGV-0013955_46	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0013955_46	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0013955_46	PF06725,MF_02071,NF040675,COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_47	phrog_4433	257.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0013955_47	439375.Oant_2324	122.0	1.39e-29	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0013955_47	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0013955_47	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0013955_49	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_50	phrog_8	54.9	0.0000000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013955_50	UniRef90_A0A847W1V2	68.2	0.0000000000000958	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0013955_50	1497679.EP56_15175	64.7	0.000000000000387	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0013955_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0013955_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0013955_50	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0013955_51	phrog_8	48.0	0.00000000000029	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013955_51	UniRef90_A0A7Y7QGX3	56.6	0.0000000635	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0013955_51	1449336.JQLO01000001_gene2236	54.3	0.0000000831	Transcriptional regulator, Cro CI family	N/A
COG	UHGV-0013955_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0013955_51	PF12844,NF007257,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0013955_54	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0013955	Yes	30,515	53	72	1