vOTU vOTU-164595

vOTU: vOTU-164595

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-164595
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00061 → vGENUS-00150 → vOTU-164595
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1534736
Biosample ID	SAMEA2738166
Genome length (bp)	31,233 bps
CheckV completeness	75.74% (Medium-quality)
CDS count	43
CDS density	93.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Veillonellaceae → Veillonella	Total connections	56	Host agreement	96.43
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.74)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1534736_2	phrog_2967	61.8	1.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1534736_2	UniRef90_UPI001D073245	204.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1534736_2	861450.HMPREF0080_02022	142.0	7.7702e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1534736_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1534736_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1534736_2	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_4	phrog_7735	80.5	1.7e-23	excisionase	integration and excision
UniRef90	UHGV-1534736_4	UniRef90_UPI001D08B64F	175.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1534736_4	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1534736_4	PF12728,MF_01155,NF033787,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_5	phrog_674	89.5	1e-26	N/A	unknown function
UniRef90	UHGV-1534736_5	UniRef90_UPI001D090BA8	519.0	0	N/A	N/A
eggNOG-mapper	UHGV-1534736_5	1415775.U729_15	83.2	0.00000000000000131	N/A	N/A
Pfam	UHGV-1534736_5	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1534736_5	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_6	phrog_7838	114.2	1.2e-33	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_6	UniRef90_UPI001D07B780	406.0	0	RAD52 family DNA repair protein	N/A
eggNOG-mapper	UHGV-1534736_6	742767.HMPREF9456_02397	122.0	6.73e-32	N/A	N/A
Pfam	UHGV-1534736_6	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
structural_annotation	UHGV-1534736_6	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_7	phrog_72	68.1	1.3e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1534736_7	1507.HMPREF0262_00432	92.8	3.06e-21	N/A	N/A
PHROG	UHGV-1534736_8	phrog_374	220.5	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_8	UniRef90_A0A7W0C2S3	197.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-1534736_8	1540091.A0A0A0RNF3_9CAUD	189.0	0	sequence-specific DNA binding transcription factor activity	N/A
KOfam	UHGV-1534736_9	K07451	53.0	0.0000000000000062	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1534736_9	phrog_7370	56.7	3.5e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_9	UniRef90_A0A2S7ZGY4	148.0	1.54143e-44	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1534736_9	447909.A6M989_9VIRU	52.4	0.00000109	endonuclease activity	N/A
Pfam	UHGV-1534736_9	PF01844	N/A	N/A	HNH endonuclease	HNH
structural_annotation	UHGV-1534736_9	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_11	phrog_5968	193.9	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_11	UniRef90_UPI0019608C6C	423.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1534736_11	565664.EFXG_01794	195.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-1534736_11	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1534736_11	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1534736_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1534736_11	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_12	phrog_9804	81.2	1.2e-23	N/A	unknown function
UniRef90	UHGV-1534736_12	UniRef90_A0A3A9I1A3	55.1	0.00000908	Inhibitor_G39P domain-containing protein	N/A
structural_annotation	UHGV-1534736_12	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-1534736_13	K03111	141.4	9.6003e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1534736_13	phrog_44	127.4	1.1e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_13	UniRef90_UPI000750C286	222.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1534736_13	936589.HMPREF1521_1228	189.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1534736_13	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1534736_13	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1534736_13	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1534736_13	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1534736_13	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1534736_14	PF16857,MF_00273	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_15	phrog_1672	49.1	0.000000000000051	N/A	unknown function
UniRef90	UHGV-1534736_15	UniRef90_F5L204	117.0	5.84e-31	Conserved domain protein	N/A
PHROG	UHGV-1534736_16	phrog_2776	46.8	0.00000000000029	N/A	unknown function
UniRef90	UHGV-1534736_16	UniRef90_UPI001899258E	167.0	0	MmcB family DNA repair protein	N/A
structural_annotation	UHGV-1534736_16	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_17	phrog_244	75.7	7.7e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_17	UniRef90_A0A841R0Q1	146.0	3.1249e-43	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1534736_17	1123250.KB908417_gene653	135.0	1.08e-39	N/A	N/A
structural_annotation	UHGV-1534736_17	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1534736_18	PF13384,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-1534736_19	K01520	150.9	8.40779e-45	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-1534736_19	phrog_135	148.8	1.96182e-44	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1534736_19	UniRef90_UPI001D0616FF	243.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1534736_19	192875.XP_004364204.1	121.0	1.86e-33	Deoxyuridine 5-triphosphate nucleotidohydrolase	N/A
Pfam	UHGV-1534736_19	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-1534736_19	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-1534736_19	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1534736_19	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-1534736_20	K19232	131.0	1.6e-40	btaE; hyaluronate-binding autotransporter adhesin	N/A
UniRef90	UHGV-1534736_20	UniRef90_UPI001D068F5F	417.0	0	YadA-like family protein	N/A
eggNOG-mapper	UHGV-1534736_20	1128111.HMPREF0870_01786	178.0	0	Hep Hag repeat protein	N/A
Pfam	UHGV-1534736_20	PF05658	N/A	N/A	YadA head domain repeat (2 copies)	YadA_head
Pfam	UHGV-1534736_20	PF05662	N/A	N/A	Coiled stalk of trimeric autotransporter adhesin	YadA_stalk
Pfam	UHGV-1534736_20	PF03895	N/A	N/A	YadA-like membrane anchor domain	YadA_anchor
COG	UHGV-1534736_20	COG5295	N/A	N/A	Autotransporter adhesin	N/A
structural_annotation	UHGV-1534736_20	PF03895,NF033478,COG5295	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_24	phrog_419	103.6	2.3e-30	N/A	unknown function
UniRef90	UHGV-1534736_24	UniRef90_A0A6G6XL02	90.9	3.96e-22	MazG-like nucleotide pyrophosphohydrolase	N/A
eggNOG-mapper	UHGV-1534736_24	1277892.M1IRA5_9CAUD	92.8	1.12e-23	N/A	N/A
structural_annotation	UHGV-1534736_24	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_25	phrog_21026	80.0	2.6e-23	N/A	unknown function
PHROG	UHGV-1534736_26	phrog_36	48.8	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-1534736_26	UniRef90_D1YMC4	87.4	4.71e-19	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-1534736_26	706434.HMPREF9429_00383	50.4	0.00000935	N/A	N/A
structural_annotation	UHGV-1534736_26	PF07374,TIGR02984	N/A	N/A	N/A	N/A
KOfam	UHGV-1534736_29	K07474	125.6	7.2e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1534736_29	phrog_51	131.6	3.9e-39	terminase small subunit	head and packaging
UniRef90	UHGV-1534736_29	UniRef90_UPI001D065029	209.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1534736_29	1280689.AUJC01000003_gene961	125.0	2.85e-35	Terminase small subunit	N/A
Pfam	UHGV-1534736_29	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1534736_29	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1534736_29	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_30	phrog_5902	249.3	0	N/A	unknown function
UniRef90	UHGV-1534736_30	UniRef90_UPI0018A6EFE4	584.0	0	terminase	N/A
eggNOG-mapper	UHGV-1534736_30	1200557.JHWV01000001_gene277	583.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-1534736_30	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1534736_30	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_32	phrog_332	464.6	0	head-tail adaptor	connector
UniRef90	UHGV-1534736_32	UniRef90_UPI001D07F371	1085.0	0	portal protein	N/A
eggNOG-mapper	UHGV-1534736_32	1401067.HMPREF0872_06810	595.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-1534736_32	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-1534736_32	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_33	phrog_528	64.3	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1534736_33	568816.Acin_1833	62.8	0.0000000000237	N/A	N/A
PHROG	UHGV-1534736_34	phrog_458	93.6	2.8e-27	protease	other
eggNOG-mapper	UHGV-1534736_34	1401067.HMPREF0872_06800	119.0	4.18e-31	N/A	N/A
PHROG	UHGV-1534736_35	phrog_212	167.3	0	major head protein	head and packaging
UniRef90	UHGV-1534736_35	UniRef90_A0A239Z8I8	608.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-1534736_35	1401067.HMPREF0872_06795	369.0	0	N/A	N/A
Pfam	UHGV-1534736_35	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-1534736_35	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_36	phrog_427	41.9	0.000000000016	N/A	unknown function
structural_annotation	UHGV-1534736_36	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_38	phrog_394	168.0	0	tail protein	tail
eggNOG-mapper	UHGV-1534736_38	1401067.HMPREF0872_06780	211.0	0	N/A	N/A
structural_annotation	UHGV-1534736_38	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_39	phrog_376	640.0	0	tail protein	tail
UniRef90	UHGV-1534736_39	UniRef90_A0A3A4JUE0	328.0	0	E1_FCCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1534736_39	1401067.HMPREF0872_06775	650.0	0	N/A	N/A
structural_annotation	UHGV-1534736_39	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_40	phrog_308	75.7	5.9e-22	internal virion protein	head and packaging
UniRef90	UHGV-1534736_40	UniRef90_UPI001D08FF44	335.0	0	N/A	N/A
Pfam	UHGV-1534736_40	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-1534736_40	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_41	phrog_418	70.2	2.4e-20	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1534736_41	1401067.HMPREF0872_06765	172.0	0	N/A	N/A
structural_annotation	UHGV-1534736_41	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
KOfam	UHGV-1534736_42	K21471	70.9	2.1e-20	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-1534736_42	UniRef90_A0A096AJQ8	328.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-1534736_42	1401067.HMPREF0872_06760	328.0	0	N/A	N/A
Pfam	UHGV-1534736_42	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-1534736_42	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1534736_43	phrog_9880	156.9	0	N/A	unknown function
UniRef90	UHGV-1534736_43	UniRef90_D1YMD8	1277.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1534736_43	568816.Acin_1824	189.0	2.8026e-45	N/A	N/A
Pfam	UHGV-1534736_43	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1534736	Yes	31,233	37	76	1