vOTU vOTU-165025

vOTU: vOTU-165025

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-165025
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00484 → vOTU-165025
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0197881
Biosample ID	SAMN09781720
Genome length (bp)	27,662 bps
CheckV completeness	67.80% (Medium-quality)
CDS count	56
CDS density	91.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	53	Host agreement	94.34
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0197881_2	phrog_544	121.9	5.5e-36	major head protein	head and packaging
UniRef90	UHGV-0197881_2	UniRef90_A0A1C6B5R0	333.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0197881_2	476272.RUMHYD_01776	315.0	0	N/A	N/A
structural_annotation	UHGV-0197881_2	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_4	phrog_17977	75.3	5.4e-22	N/A	unknown function
UniRef90	UHGV-0197881_4	UniRef90_A0A285PT57	92.4	6.53e-22	Phage head-tail joining protein	N/A
structural_annotation	UHGV-0197881_4	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_5	phrog_17405	40.7	0.000000000034	head protein	head and packaging
structural_annotation	UHGV-0197881_5	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_6	phrog_885	85.0	6.9e-25	major tail protein	tail
UniRef90	UHGV-0197881_6	UniRef90_A0A843J9F0	220.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0197881_6	1504822.CCNO01000012_gene492	253.0	0	N/A	N/A
structural_annotation	UHGV-0197881_6	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197881_7	UniRef90_A0A285PXU7	68.6	0.00000000000332	Consensus disorder prediction	N/A
PHROG	UHGV-0197881_9	phrog_7115	120.3	9.4e-36	N/A	unknown function
UniRef90	UHGV-0197881_9	UniRef90_A0A810PSE6	227.0	0	bPH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0197881_9	1514668.JOOA01000002_gene2950	201.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0197881_9	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
structural_annotation	UHGV-0197881_9	PF08000,MF_00437	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_10	phrog_6900	260.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0197881_10	UniRef90_A0A6N7SND2	229.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0197881_10	536233.CLO_1577	317.0	0	tape measure	N/A
COG	UHGV-0197881_10	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0197881_10	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_11	phrog_1194	43.0	0.000000000006	N/A	unknown function
structural_annotation	UHGV-0197881_11	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_12	phrog_32744	647.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0197881_12	1120998.AUFC01000030_gene2247	223.0	0	N/A	N/A
structural_annotation	UHGV-0197881_12	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197881_14	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_15	phrog_31538	51.4	0.000000000000022	N/A	unknown function
PHROG	UHGV-0197881_16	phrog_13589	152.6	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0197881_16	428125.CLOLEP_01434	205.0	0	N/A	N/A
PHROG	UHGV-0197881_17	phrog_37900	58.3	3e-17	N/A	unknown function
UniRef90	UHGV-0197881_17	UniRef90_UPI001897C7B4	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197881_17	1519439.JPJG01000060_gene1894	158.0	3.11088e-43	N/A	N/A
Pfam	UHGV-0197881_17	PF07523	N/A	N/A	Bacterial Ig-like domain (group 3)	Big_3
Pfam	UHGV-0197881_17	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0197881_17	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-0197881_17	PF19789,PF14686	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_18	phrog_1863	63.6	1.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0197881_18	748224.HMPREF9436_01412	99.0	1.99e-26	N/A	N/A
PHROG	UHGV-0197881_19	phrog_13256	64.9	7.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0197881_19	1226322.HMPREF1545_00132	70.1	0.00000000000000386	N/A	N/A
PHROG	UHGV-0197881_21	phrog_18955	64.4	1e-18	N/A	unknown function
UniRef90	UHGV-0197881_21	UniRef90_UPI00164D2830	373.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-0197881_21	696369.KI912183_gene2044	57.4	0.000000701	exopolysaccharide biosynthesis protein	N/A
Pfam	UHGV-0197881_21	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0197881_21	COG4632	N/A	N/A	Sugar-P-sugar glycosidase (uncovering enzyme, UCE), NAGPA superfamily	N/A
structural_annotation	UHGV-0197881_21	PF09992,COG4632	N/A	N/A	N/A	N/A
KOfam	UHGV-0197881_22	K08640	95.2	1.1e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0197881_22	phrog_894	97.7	1.2e-28	endolysin	lysis
UniRef90	UHGV-0197881_22	UniRef90_K1TJK4	206.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0197881_22	1235797.C816_04171	188.0	0	Peptidase M15	N/A
Pfam	UHGV-0197881_22	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0197881_22	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197881_22	PF05951,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197881_24	742738.HMPREF9460_04058	111.0	2.18e-27	N/A	N/A
UniRef90	UHGV-0197881_25	UniRef90_A0A096AZ46	143.0	5.95005e-41	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0197881_25	742738.HMPREF9460_04059	143.0	9.98005e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0197881_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197881_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0197881_25	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_28	phrog_3754	106.8	1.5e-31	N/A	unknown function
eggNOG-mapper	UHGV-0197881_28	1226322.HMPREF1545_00073	162.0	0	N/A	N/A
PHROG	UHGV-0197881_29	phrog_21718	103.9	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0197881_29	397290.C810_05210	72.4	0.0000000000000674	N/A	N/A
PHROG	UHGV-0197881_30	phrog_22984	88.7	4.3e-26	N/A	unknown function
PHROG	UHGV-0197881_31	phrog_16490	157.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0197881_31	397290.C810_05212	127.0	5.79e-33	N/A	N/A
PHROG	UHGV-0197881_33	phrog_20016	189.6	0	N/A	unknown function
UniRef90	UHGV-0197881_33	UniRef90_A0A285PT46	175.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0197881_33	1226322.HMPREF1545_00077	160.0	0	N/A	N/A
structural_annotation	UHGV-0197881_33	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197881_34	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197881_35	1232443.BAIA02000078_gene6	55.5	0.000000021	N/A	N/A
KOfam	UHGV-0197881_36	K06400	287.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0197881_36	phrog_95	301.0	0	integrase	integration and excision
UniRef90	UHGV-0197881_36	UniRef90_A0A3A9ED02	348.0	0	Site-specific recombinase	N/A
eggNOG-mapper	UHGV-0197881_36	357809.Cphy_2997	297.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0197881_36	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0197881_36	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0197881_36	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0197881_36	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0197881_37	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197881_37	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0197881_37	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197881_38	UniRef90_A0A6J7P3L5	74.7	6.97e-17	Unannotated protein	N/A
eggNOG-mapper	UHGV-0197881_38	483216.BACEGG_01163	66.2	0.0000000000000328	N/A	N/A
UniRef90	UHGV-0197881_41	UniRef90_A0A328UFC2	57.8	0.0000000014	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0197881_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0197881_41	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0197881_41	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197881_42	760568.Desku_0919	116.0	9.74e-30	N/A	N/A
structural_annotation	UHGV-0197881_42	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197881_46	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_48	phrog_4973	42.0	0.000000000013	N/A	unknown function
Pfam	UHGV-0197881_48	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0197881_48	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_50	phrog_7838	149.5	1.96182e-44	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197881_50	UniRef90_A0A8D9UGW3	273.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0197881_50	742767.HMPREF9456_02052	188.0	0	N/A	N/A
structural_annotation	UHGV-0197881_50	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_51	phrog_72	69.9	3.1e-20	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197881_51	UniRef90_A0A8D9PDS2	165.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0197881_51	445972.ANACOL_01825	149.0	2.99878e-43	N/A	N/A
Pfam	UHGV-0197881_51	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0197881_51	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_52	phrog_7370	58.2	1.2e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197881_52	UniRef90_UPI001C122365	134.0	1.25e-38	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0197881_52	1235800.C819_02254	70.1	0.000000000000056	HNH nucleases	N/A
Pfam	UHGV-0197881_52	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-0197881_53	K03111	151.1	9.80909e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0197881_53	phrog_44	148.6	2.94273e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197881_53	UniRef90_A0A1C5QDM6	209.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0197881_53	1226322.HMPREF1545_04080	210.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0197881_53	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0197881_53	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0197881_53	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0197881_53	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0197881_53	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0197881_54	phrog_1408	66.0	3.4e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197881_54	UniRef90_A0A417QFV0	105.0	7.12e-24	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0197881_54	742740.HMPREF9474_03117	184.0	0	N/A	N/A
structural_annotation	UHGV-0197881_54	PF01978,NF000243,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0197881_56	K00571	88.9	6.1e-26	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0197881_56	phrog_23224	191.1	0	DNA methyltransferase	other
UniRef90	UHGV-0197881_56	UniRef90_UPI000C7E7D35	317.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0197881_56	718252.FP2_06750	216.0	0	DNA methylase	N/A
PADLOC	UHGV-0197881_56	MTase_II_00172	92.7	5.9e-29	Type II methyltransferase	RM
Pfam	UHGV-0197881_56	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0197881_56	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0197881_56	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0197881	Yes	27,662	54	68	1
UHGV-0189515	No	26,793	54	66	1