vOTU vOTU-165366

vOTU: vOTU-165366

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-165366
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01452 → vGENUS-01676 → vOTU-165366
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus → Enterococcus faecalis
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0137054
Biosample ID	SAMN06051247
Genome length (bp)	21,880 bps
CheckV completeness	52.89% (Medium-quality)
CDS count	35
CDS density	94.73%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus → Enterococcus faecalis	Total connections	70	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus → Enterococcus faecalis	Total connections	92	Host agreement	85.87

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.89)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0137054_1	phrog_1686	458.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0137054_1	UniRef90_V7ZNZ9	549.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0137054_1	1486428.A0A097BYA1_9CAUD	544.0	0	N/A	N/A
Pfam	UHGV-0137054_1	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0137054_1	TIGR02675.1	N/A	N/A	tape measure protein	N/A
PHROG	UHGV-0137054_2	phrog_441	73.2	4.2e-21	tail assembly chaperone	tail
eggNOG-mapper	UHGV-0137054_2	1486428.A0A097BYA4_9CAUD	166.0	0	N/A	N/A
PHROG	UHGV-0137054_3	phrog_183	95.6	5.5e-28	tail chaperone protein	tail
UniRef90	UHGV-0137054_3	UniRef90_UPI000B4C19E6	135.0	8.07e-39	tail assembly chaperone	N/A
eggNOG-mapper	UHGV-0137054_3	1486428.A0A097BYB6_9CAUD	216.0	0	Pfam:Phage_TAC_12	N/A
Pfam	UHGV-0137054_3	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0137054_3	PF12363	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0137054_4	1158602.I590_01150	58.2	0.000000199	N/A	N/A
Pfam	UHGV-0137054_4	PF20622	N/A	N/A	Bacterial Ig domain (Big_16)	Big_15
COG	UHGV-0137054_4	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A
PHROG	UHGV-0137054_5	phrog_341	145.0	3.60134e-43	major tail protein	tail
UniRef90	UHGV-0137054_5	UniRef90_UPI001957F5B0	190.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0137054_5	1486428.A0A097BY60_9CAUD	214.0	0	peptidase activity	N/A
structural_annotation	UHGV-0137054_5	PF02368,MF_04116,TIGR04225,COG5492	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_6	phrog_238	214.5	0	major tail protein	tail
UniRef90	UHGV-0137054_6	UniRef90_C9E2K0	332.0	0	Phage major tail protein	N/A
eggNOG-mapper	UHGV-0137054_6	1486428.A0A097BY59_9CAUD	340.0	0	Phage major tail protein 2	N/A
Pfam	UHGV-0137054_6	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0137054_6	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0137054_6	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_7	phrog_176	132.9	1.4e-39	tail terminator	connector
UniRef90	UHGV-0137054_7	UniRef90_UPI001A8E49C4	209.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0137054_7	663241.C9E2J9_9CAUD	249.0	0	N/A	N/A
structural_annotation	UHGV-0137054_7	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_8	phrog_5	58.9	1.4e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0137054_8	UniRef90_R3KA60	245.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0137054_8	1486428.A0A097BY98_9CAUD	243.0	0	exonuclease activity	N/A
NCBIFam	UHGV-0137054_8	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0137054_8	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_9	phrog_348	124.5	3.8e-37	minor head protein	head and packaging
UniRef90	UHGV-0137054_9	UniRef90_Q38175	131.0	1.14e-37	B3 protein (Fragment)	N/A
eggNOG-mapper	UHGV-0137054_9	663241.C9E2J7_9CAUD	215.0	0	N/A	N/A
structural_annotation	UHGV-0137054_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_10	phrog_132	84.4	1.1e-24	head-tail adaptor	connector
UniRef90	UHGV-0137054_10	UniRef90_UPI001629F496	163.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0137054_10	1486428.A0A097BY55_9CAUD	139.0	1.43997e-41	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0137054_10	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0137054_10	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_11	phrog_29	239.3	0	major head protein	head and packaging
UniRef90	UHGV-0137054_11	UniRef90_A0A7U8FUB5	567.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137054_11	663241.C9E2J5_9CAUD	600.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0137054_11	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0137054_11	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_12	phrog_909	120.7	6.3e-36	major head protein	head and packaging
UniRef90	UHGV-0137054_12	UniRef90_A0A7U8FVR7	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137054_12	663241.C9E2J4_9CAUD	218.0	0	N/A	N/A
PHROG	UHGV-0137054_13	phrog_172	149.1	2.94273e-44	head scaffolding protein	head and packaging
UniRef90	UHGV-0137054_13	UniRef90_UPI001920622B	187.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137054_13	565664.EFXG_01165	179.0	0	N/A	N/A
Pfam	UHGV-0137054_13	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0137054_13	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_14	phrog_419	89.9	4.1e-26	N/A	unknown function
UniRef90	UHGV-0137054_14	UniRef90_B6V319	101.0	3.05e-26	Gp34.82	N/A
eggNOG-mapper	UHGV-0137054_14	663241.C9E2J2_9CAUD	186.0	0	N/A	N/A
structural_annotation	UHGV-0137054_14	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_15	phrog_11179	98.6	2.6e-29	N/A	unknown function
PHROG	UHGV-0137054_16	phrog_1315	71.6	9.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0137054_16	1158609.I586_00080	93.2	9.74e-24	N/A	N/A
PHROG	UHGV-0137054_17	phrog_115	293.3	0	minor head protein	head and packaging
UniRef90	UHGV-0137054_17	UniRef90_V7ZN52	595.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0137054_17	1486428.A0A097BY50_9CAUD	586.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0137054_17	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0137054_17	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
structural_annotation	UHGV-0137054_17	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_18	phrog_64	417.2	0	portal protein	head and packaging
UniRef90	UHGV-0137054_18	UniRef90_R3KA66	1031.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0137054_18	565664.EFXG_01159	641.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0137054_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0137054_18	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0137054_18	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0137054_19	K06909	387.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0137054_19	phrog_5653	182.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0137054_19	UniRef90_R3KAS8	887.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0137054_19	1201292.DR75_1517	568.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0137054_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0137054_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0137054_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0137054_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
HAMAP	UHGV-0137054_19	MF_04145	N/A	N/A	Terminase, large subunit	N/A
structural_annotation	UHGV-0137054_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0137054_20	K07474	87.2	4.5e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0137054_20	phrog_51	99.6	3.2e-29	terminase small subunit	head and packaging
UniRef90	UHGV-0137054_20	UniRef90_Q9XJG1	307.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0137054_20	1486428.A0A097BYA2_9CAUD	310.0	0	Terminase small subunit	N/A
Pfam	UHGV-0137054_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
structural_annotation	UHGV-0137054_20	PF03592	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_21	phrog_1558	191.1	0	N/A	unknown function
UniRef90	UHGV-0137054_21	UniRef90_UPI0012FCC67E	126.0	9.66e-34	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0137054_21	1486428.A0A097BY45_9CAUD	345.0	0	N/A	N/A
structural_annotation	UHGV-0137054_21	TIGR01637,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_22	phrog_3745	114.9	1.8e-34	N/A	unknown function
UniRef90	UHGV-0137054_22	UniRef90_A0A0V8E9C3	60.8	0.000000000138	N/A	N/A
eggNOG-mapper	UHGV-0137054_22	1158614.I592_02276	107.0	5.94e-30	N/A	N/A
KOfam	UHGV-0137054_23	K01160	50.2	0.000000000000075	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0137054_23	phrog_140	111.3	8.5e-33	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137054_23	UniRef90_A0A125W4P3	275.0	0	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0137054_23	1486428.A0A097BY81_9CAUD	275.0	0	magnesium ion binding	N/A
Pfam	UHGV-0137054_23	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0137054_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0137054_24	K07505	378.9	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0137054_24	phrog_2597	1256.9	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137054_24	UniRef90_R3HYP7	1489.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0137054_24	1486428.A0A097BY39_9CAUD	1434.0	0	hydrolase activity, acting on acid anhydrides	N/A
Pfam	UHGV-0137054_24	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0137054_24	PF13481	N/A	N/A	AAA domain	AAA_25
structural_annotation	UHGV-0137054_24	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_25	phrog_1335	106.5	1.4e-31	N/A	unknown function
PHROG	UHGV-0137054_26	phrog_9982	155.8	0	N/A	unknown function
PHROG	UHGV-0137054_27	phrog_121	155.1	0	N/A	unknown function
UniRef90	UHGV-0137054_27	UniRef90_UPI000DFDFA42	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-0137054_27	1300150.EMQU_2281	127.0	1.54e-34	N/A	N/A
Pfam	UHGV-0137054_27	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-0137054_27	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_28	phrog_6513	117.6	2.6e-35	N/A	unknown function
PHROG	UHGV-0137054_29	phrog_6739	45.4	0.0000000000019	N/A	unknown function
PHROG	UHGV-0137054_30	phrog_1150	124.4	6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0137054_30	1201292.DR75_1651	52.4	0.000000227	N/A	N/A
PHROG	UHGV-0137054_31	phrog_98	111.5	5.7e-33	N/A	unknown function
UniRef90	UHGV-0137054_31	UniRef90_UPI00098D4108	277.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-0137054_31	226185.EF_1440	177.0	0	YopX protein	N/A
Pfam	UHGV-0137054_31	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0137054_31	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0137054_31	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0137054_32	phrog_323	105.9	1.6e-41	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0137054_32	UniRef90_UPI0019F5E5D6	533.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0137054_32	796606.BMMGA3_03145	206.0	0	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	N/A
Pfam	UHGV-0137054_32	PF08279	N/A	N/A	HTH domain	HTH_11
Pfam	UHGV-0137054_32	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
dbAPIS	UHGV-0137054_32	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
structural_annotation	UHGV-0137054_32	PF13936,NF040595,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0137054_33	K14059	172.4	0	int; integrase	N/A
PHROG	UHGV-0137054_33	phrog_1	174.5	0	integrase	integration and excision
UniRef90	UHGV-0137054_33	UniRef90_UPI00157167EE	997.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0137054_33	762051.LKI_01885	179.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0137054_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0137054_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0137054_34	phrog_1071	323.1	0	DNA methyltransferase	other
UniRef90	UHGV-0137054_34	UniRef90_UPI0019EAFB62	439.0	0	SAM-dependent DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0137054_34	1154757.Q5C_05955	234.0	0	COG0286 Type I restriction-modification system methyltransferase subunit	N/A
COG	UHGV-0137054_34	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
KOfam	UHGV-0137054_35	K00558	115.1	5.2e-34	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0137054_35	phrog_116	111.3	6.2e-33	DNA methyltransferase	other
UniRef90	UHGV-0137054_35	UniRef90_V7ZJJ8	347.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0137054_35	1196322.A370_02058	301.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0137054_35	MTase_II_00164	122.0	1e-35	Type II methyltransferase	RM
Pfam	UHGV-0137054_35	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0137054_35	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0137054_35	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0137054_35	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0137054	Yes	21,880	36	53	1