vOTU vOTU-165377

vOTU: vOTU-165377

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-165377
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00386 → vGENUS-03898 → vOTU-165377
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1352140
Biosample ID	N/A
Genome length (bp)	23,107 bps
CheckV completeness	63.49% (Medium-quality)
CDS count	31
CDS density	92.18%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Enterococcaceae → Enterococcus_B → Enterococcus_B faecium	Total connections	925	Host agreement	98.92

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1352140_1	phrog_3302	128.3	1.7e-38	N/A	unknown function
UniRef90	UHGV-1352140_1	UniRef90_Q47835	139.0	1.71995e-41	ArpT	N/A
eggNOG-mapper	UHGV-1352140_1	1104325.M7W_1344	140.0	1.01034e-42	N/A	N/A
PHROG	UHGV-1352140_2	phrog_248	127.6	7.5e-38	transcriptional activator	transcription regulation
UniRef90	UHGV-1352140_2	UniRef90_Q47836	259.0	0	Putative autolysin regulatory protein ArpU	N/A
eggNOG-mapper	UHGV-1352140_2	768486.EHR_09525	259.0	0	N/A	N/A
NCBIFam	UHGV-1352140_2	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-1352140_2	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_3	phrog_2131	145.0	2.20004e-43	N/A	unknown function
UniRef90	UHGV-1352140_3	UniRef90_O34053	129.0	6.47e-36	ORF22	N/A
eggNOG-mapper	UHGV-1352140_3	85154.O34053_BPO12	129.0	1.08e-36	N/A	N/A
PHROG	UHGV-1352140_4	phrog_918	105.0	3.2e-31	N/A	unknown function
UniRef90	UHGV-1352140_4	UniRef90_UPI0013D7DEC2	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-1352140_4	1260356.D920_00086	114.0	3.16e-32	N/A	N/A
Pfam	UHGV-1352140_4	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1352140_4	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_5	phrog_13806	140.1	2.40042e-42	N/A	unknown function
PHROG	UHGV-1352140_6	phrog_1202	135.8	7.09996e-41	N/A	unknown function
eggNOG-mapper	UHGV-1352140_6	1140001.I571_01149	123.0	3.36e-36	N/A	N/A
structural_annotation	UHGV-1352140_6	PF18789	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_7	phrog_1889	354.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1352140_7	UniRef90_A0A4S2C128	482.0	0	Small subunit of terminase	N/A
eggNOG-mapper	UHGV-1352140_7	1158604.I591_00397	447.0	0	Phage terminase small subunit	N/A
Pfam	UHGV-1352140_7	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-1352140_7	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1352140_7	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352140_7	PF10668,NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-1352140_8	K06909	69.6	4.3e-20	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1352140_8	phrog_5902	263.4	0	N/A	unknown function
UniRef90	UHGV-1352140_8	UniRef90_A0A511J545	910.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1352140_8	1158604.I591_00398	910.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1352140_8	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1352140_8	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-1352140_8	PF04466,PF20441,MF_04145,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_9	phrog_64	297.4	0	portal protein	head and packaging
UniRef90	UHGV-1352140_9	UniRef90_A0A511J5V4	964.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1352140_9	1158604.I591_00399	964.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1352140_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1352140_9	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_10	phrog_2841	204.1	0	minor head protein	head and packaging
UniRef90	UHGV-1352140_10	UniRef90_A0A7U8FBT1	516.0	0	Minor head protein	N/A
eggNOG-mapper	UHGV-1352140_10	1158604.I591_00400	545.0	0	cell adhesion	N/A
NCBIFam	UHGV-1352140_10	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1352140_10	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352140_10	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_11	phrog_5859	119.4	7.8e-37	N/A	unknown function
eggNOG-mapper	UHGV-1352140_11	1158604.I591_00401	206.0	0	N/A	N/A
structural_annotation	UHGV-1352140_11	PF03927,MF_02200,NF009840,COG3471	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_12	phrog_172	83.9	2.3e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1352140_12	UniRef90_A0A1Y3HWY1	382.0	0	N/A	N/A
eggNOG-mapper	UHGV-1352140_12	1158604.I591_00402	303.0	0	N/A	N/A
Pfam	UHGV-1352140_12	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1352140_12	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_13	phrog_1328	240.1	0	major head protein	head and packaging
UniRef90	UHGV-1352140_13	UniRef90_UPI00065DF913	512.0	0	N/A	N/A
eggNOG-mapper	UHGV-1352140_13	1158604.I591_00403	571.0	0	N/A	N/A
Pfam	UHGV-1352140_13	PF17236	N/A	N/A	N/A	DUF5309
structural_annotation	UHGV-1352140_13	PF17236,MF_04119,NF033394,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_14	phrog_8832	135.0	1.10001e-40	N/A	unknown function
eggNOG-mapper	UHGV-1352140_14	1158604.I591_00404	124.0	5.44e-37	N/A	N/A
PHROG	UHGV-1352140_15	phrog_132	46.7	0.00000000000043	head-tail adaptor	connector
eggNOG-mapper	UHGV-1352140_15	1158604.I591_00405	202.0	0	N/A	N/A
PHROG	UHGV-1352140_16	phrog_615	101.9	4.2e-30	head-tail adaptor	connector
UniRef90	UHGV-1352140_16	UniRef90_R3I753	119.0	1.64e-32	50S ribosomal protein L23	N/A
eggNOG-mapper	UHGV-1352140_16	1158604.I591_00406	243.0	0	N/A	N/A
structural_annotation	UHGV-1352140_16	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_17	phrog_5	43.1	0.00000000001	tail completion or Neck1 protein	connector
UniRef90	UHGV-1352140_17	UniRef90_UPI0018832E9E	200.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1352140_17	1158604.I591_00407	248.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1352140_17	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1352140_17	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_18	phrog_525	81.1	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-1352140_18	1158604.I591_00408	226.0	0	N/A	N/A
Pfam	UHGV-1352140_18	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-1352140_18	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_19	phrog_88	144.8	4.2039e-43	major tail protein	tail
UniRef90	UHGV-1352140_19	UniRef90_A0A4V3RFT0	379.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1352140_19	1158604.I591_00409	379.0	0	Maj_tail_phi13 phage major tail , phi13 family protein	N/A
NCBIFam	UHGV-1352140_19	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1352140_19	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1352140_19	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_20	phrog_187	65.3	9.4e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1352140_20	1158604.I591_00410	183.0	0	N/A	N/A
PHROG	UHGV-1352140_21	phrog_1686	205.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1352140_21	UniRef90_A0A2C9X4D2	1112.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1352140_21	1158604.I591_00411	969.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1352140_21	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1352140_21	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1352140_21	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
PHROG	UHGV-1352140_22	phrog_33	79.5	6.4e-23	distal tail protein Dit	tail
UniRef90	UHGV-1352140_22	UniRef90_A0A132Z2M0	505.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1352140_22	1158604.I591_00412	461.0	0	tail component	N/A
COG	UHGV-1352140_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1352140_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_23	phrog_1067	678.0	0	minor head protein	head and packaging
UniRef90	UHGV-1352140_23	UniRef90_A0A1L8WI77	1306.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-1352140_23	1158614.I592_02417	1164.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1352140_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1352140_23	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1352140_23	PF05257	N/A	N/A	CHAP domain	CHAP
NCBIFam	UHGV-1352140_23	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1352140_23	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1352140_23	PF14594,PF01551,PF18013,TIGR01665,NF040883,COG4926,COG0739	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_24	phrog_6042	394.1	0	minor head protein	head and packaging
UniRef90	UHGV-1352140_24	UniRef90_C9BVE8	490.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1352140_24	1201292.DR75_1500	372.0	0	N/A	N/A
Pfam	UHGV-1352140_24	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1352140_24	PF10651,NF040788	N/A	N/A	N/A	N/A
PHROG	UHGV-1352140_25	phrog_9625	196.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1352140_25	1158607.UAU_01045	213.0	0	N/A	N/A
PHROG	UHGV-1352140_26	phrog_6907	121.6	0	N/A	unknown function
UniRef90	UHGV-1352140_26	UniRef90_UPI001A8F63C0	136.0	4.01e-38	collagen-like protein	N/A
eggNOG-mapper	UHGV-1352140_26	1158607.UAU_01046	141.0	4.99997e-41	N/A	N/A
PHROG	UHGV-1352140_27	phrog_9884	142.8	2.10055e-42	N/A	unknown function
UniRef90	UHGV-1352140_27	UniRef90_A0A377L4Q9	172.0	0	Bactriophage minor structural protein	N/A
eggNOG-mapper	UHGV-1352140_27	1140001.I571_01760	220.0	0	N/A	N/A
COG	UHGV-1352140_27	COG0584	N/A	N/A	Glycerophosphoryl diester phosphodiesterase	N/A
PHROG	UHGV-1352140_28	phrog_1766	74.2	1.9e-21	tail fiber protein	tail
UniRef90	UHGV-1352140_28	UniRef90_A0A2A7SSX1	131.0	1.74e-37	Cytochrome c-type biogenesis protein CcmE	N/A
PHROG	UHGV-1352140_29	phrog_134	63.6	2.2e-18	N/A	unknown function
UniRef90	UHGV-1352140_29	UniRef90_A0A2S7M0P2	80.9	2.58e-19	XkdX family protein	N/A
eggNOG-mapper	UHGV-1352140_29	1274524.BSONL12_06203	62.4	0.00000000000108	Phage uncharacterised protein (Phage_XkdX)	N/A
Pfam	UHGV-1352140_29	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-1352140_29	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
PHROG	UHGV-1352140_30	phrog_199	85.5	5.5e-25	holin	lysis
UniRef90	UHGV-1352140_30	UniRef90_A0A7U8FHM4	263.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1352140_30	1158607.UAU_02798	188.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1352140_30	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1352140_30	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1352140_30	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1352140_30	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1352140_31	K01447	90.3	2.9e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1352140_31	phrog_1110	270.0	0	endolysin	lysis
UniRef90	UHGV-1352140_31	UniRef90_A0A377MS14	506.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1352140_31	1140001.I571_01766	514.0	0	Ami_2	N/A
Pfam	UHGV-1352140_31	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1352140_31	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1352140_31	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1352140	Yes	23,107	35	63	1