vOTU vOTU-165424

vOTU: vOTU-165424

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-165424
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00950 → vOTU-165424
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0023724
Biosample ID	N/A
Genome length (bp)	23,636 bps
CheckV completeness	60.58% (Medium-quality)
CDS count	42
CDS density	94.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	7	Host agreement	85.71
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 60.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0023724_1	UniRef90_A0A1V5ZUM0	91.3	1.62e-21	Endodeoxyribonuclease RusA	N/A
PHROG	UHGV-0023724_2	phrog_3136	121.3	3.7e-36	N/A	unknown function
UniRef90	UHGV-0023724_2	UniRef90_A0A3D0HBD2	112.0	3.38e-28	ASCH domain-containing protein	N/A
COG	UHGV-0023724_2	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0023724_2	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_4	phrog_9298	68.8	5.6e-20	radical SAM domain protein	other
UniRef90	UHGV-0023724_4	UniRef90_D4C6F1	315.0	0	Elp3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0023724_4	742738.HMPREF9460_03770	293.0	0	radical SAM domain protein	N/A
COG	UHGV-0023724_4	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0023724_4	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_8	phrog_38832	43.6	2.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0023724_8	665956.HMPREF1032_00143	66.2	0.0000000000151	N/A	N/A
structural_annotation	UHGV-0023724_8	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_10	phrog_599	57.1	4.5e-16	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0023724_10	UniRef90_UPI0015F77E42	50.8	0.000000525	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0023724_10	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0023724_10	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0023724_10	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
UniRef90	UHGV-0023724_13	UniRef90_UPI0019D1E2CF	265.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-0023724_13	1410632.JHWW01000006_gene695	214.0	0	N/A	N/A
Pfam	UHGV-0023724_13	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-0023724_13	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_17	phrog_801	82.9	4.4e-24	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0023724_17	UniRef90_A0A2K9P078	109.0	5.06e-29	N/A	N/A
eggNOG-mapper	UHGV-0023724_17	1297570.MESS4_510075	51.6	0.00000305	N/A	N/A
Pfam	UHGV-0023724_17	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0023724_17	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_19	phrog_36	79.7	4.1e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0023724_19	UniRef90_A0A858BU04	88.2	1.19e-19	N/A	N/A
eggNOG-mapper	UHGV-0023724_19	1034347.CAHJ01000051_gene25	68.6	0.000000000000922	N/A	N/A
Pfam	UHGV-0023724_19	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0023724_19	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0023724_19	PF07374,MF_00245,TIGR02980,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023724_20	UniRef90_A0A2Z4Q9Z4	156.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-0023724_20	1226322.HMPREF1545_00042	149.0	1.68156e-44	N/A	N/A
structural_annotation	UHGV-0023724_20	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0023724_21	K06909	130.5	1.8e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0023724_21	phrog_10250	160.9	0	N/A	unknown function
UniRef90	UHGV-0023724_21	UniRef90_A0A1C6J947	624.0	0	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0023724_21	1226322.HMPREF1545_00043	609.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0023724_21	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0023724_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0023724_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0023724_21	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_23	phrog_533	213.6	0	portal protein	head and packaging
UniRef90	UHGV-0023724_23	UniRef90_UPI000680A1DB	536.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0023724_23	693746.OBV_18040	394.0	0	N/A	N/A
Pfam	UHGV-0023724_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0023724_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_24	phrog_581	228.3	0	minor head protein	head and packaging
UniRef90	UHGV-0023724_24	UniRef90_UPI0006814CA4	503.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0023724_24	693746.OBV_18050	525.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0023724_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0023724_24	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0023724_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023724_24	PF06152,PF15542,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_26	phrog_194	87.7	1.6e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0023724_26	UniRef90_UPI00164D9F94	238.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0023724_26	693746.OBV_18080	173.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0023724_26	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0023724_26	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_27	phrog_212	263.7	0	major head protein	head and packaging
UniRef90	UHGV-0023724_27	UniRef90_A0A354MR33	541.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0023724_27	1232449.BAHV02000010_gene2714	343.0	0	N/A	N/A
structural_annotation	UHGV-0023724_27	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_28	phrog_541	63.7	2.5e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-0023724_28	693746.OBV_18110	107.0	1.95e-28	N/A	N/A
structural_annotation	UHGV-0023724_29	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_30	phrog_556	70.1	2.7e-20	minor head protein	head and packaging
UniRef90	UHGV-0023724_30	UniRef90_A0A4R1QRE8	109.0	1.28e-27	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0023724_30	33035.JPJF01000106_gene3128	78.6	2.42e-16	N/A	N/A
Pfam	UHGV-0023724_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0023724_30	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_31	phrog_3266	57.7	1.8e-16	tail completion	connector
eggNOG-mapper	UHGV-0023724_31	693746.OBV_18140	214.0	0	N/A	N/A
structural_annotation	UHGV-0023724_31	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_32	phrog_3099	85.0	1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0023724_32	693746.OBV_18150	254.0	0	N/A	N/A
structural_annotation	UHGV-0023724_32	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_33	phrog_11299	90.2	2.4e-26	N/A	unknown function
eggNOG-mapper	UHGV-0023724_33	693746.OBV_18160	162.0	0	N/A	N/A
structural_annotation	UHGV-0023724_33	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_34	phrog_706	106.5	2.4e-31	N/A	unknown function
UniRef90	UHGV-0023724_34	UniRef90_UPI000682A80B	221.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0023724_34	693746.OBV_18170	217.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0023724_34	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0023724_34	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0023724_35	K18843	57.5	3.2e-16	hicB; antitoxin HicB	N/A
PHROG	UHGV-0023724_35	phrog_497	73.8	3.2e-21	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0023724_35	UniRef90_A0A1G5DHT1	193.0	0	Predicted nuclease of the RNAse H fold, HicB family	N/A
eggNOG-mapper	UHGV-0023724_35	1042156.CXIVA_01880	190.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-0023724_35	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-0023724_35	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-0023724_35	PF15919,COG1598	N/A	N/A	N/A	N/A
UniRef90	UHGV-0023724_36	UniRef90_A0A173T1A3	78.2	8.39e-18	YcfA-like protein	N/A
eggNOG-mapper	UHGV-0023724_36	1410609.JHVB01000004_gene465	86.7	6.2e-22	N/A	N/A
structural_annotation	UHGV-0023724_36	PF07927,COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_37	phrog_1535	204.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0023724_37	UniRef90_A0A1C5N853	323.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0023724_37	1304866.K413DRAFT_3046	121.0	4.8e-25	N/A	N/A
COG	UHGV-0023724_37	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0023724_38	phrog_1194	95.2	4.9e-28	N/A	unknown function
eggNOG-mapper	UHGV-0023724_38	1219626.HMPREF1639_07230	64.3	0.0000000000118	N/A	N/A
Pfam	UHGV-0023724_38	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0023724_38	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0023724_39	phrog_6616	71.5	7.6e-21	tail protein	tail
eggNOG-mapper	UHGV-0023724_39	1235797.C816_04180	120.0	2.49e-28	N/A	N/A
structural_annotation	UHGV-0023724_39	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023724_40	PF07761	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0023724_41	PF10651,NF038186	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0023724	Yes	23,636	51	61	1