vOTU vOTU-165982

vOTU: vOTU-165982

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-165982
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00097 → vGENUS-00105 → vOTU-165982
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Blautia_A
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1379676
Biosample ID	SAMEA2581931
Genome length (bp)	39,496 bps
CheckV completeness	51.17% (Medium-quality)
CDS count	69
CDS density	79.62%
tRNA count	5
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Blautia_A	Total connections	280	Host agreement	88.93
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	2	Host agreement	50

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1379676_1	500635.MITSMUL_03163	56.6	0.00000314	Membrane	N/A
COG	UHGV-1379676_1	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-1379676_2	phrog_2310	42.2	0.0000000000084	N/A	unknown function
eggNOG-mapper	UHGV-1379676_3	476272.RUMHYD_00002	95.9	1.82e-17	N/A	N/A
eggNOG-mapper	UHGV-1379676_5	397290.C810_01336	68.9	0.000000000000192	N/A	N/A
structural_annotation	UHGV-1379676_6	PF18313	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379676_8	1408437.JNJN01000043_gene802	164.0	0	N/A	N/A
PHROG	UHGV-1379676_9	phrog_16490	213.8	0	N/A	unknown function
eggNOG-mapper	UHGV-1379676_9	658655.HMPREF0988_00917	182.0	0	N/A	N/A
PHROG	UHGV-1379676_11	phrog_21718	75.3	7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1379676_11	476272.RUMHYD_01952	106.0	8.87e-27	N/A	N/A
UniRef90	UHGV-1379676_12	UniRef90_A0A412EMQ9	150.0	0	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1379676_12	476272.RUMHYD_01951	60.1	0.0000000000731	N/A	N/A
structural_annotation	UHGV-1379676_12	PF04545,MF_00674,NF001073,COG1595	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_13	phrog_937	53.5	0.0000000000000021	hemolysin	other
eggNOG-mapper	UHGV-1379676_14	476272.RUMHYD_01948	112.0	8.2e-31	N/A	N/A
PHROG	UHGV-1379676_15	phrog_29	141.7	5.4006e-42	major head protein	head and packaging
UniRef90	UHGV-1379676_15	UniRef90_R0C0Z5	395.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_15	1232443.BAIA02000078_gene29	283.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1379676_15	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1379676_15	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_16	phrog_909	70.3	2.4e-20	major head protein	head and packaging
eggNOG-mapper	UHGV-1379676_16	1497679.EP56_02915	65.5	0.00000000000264	N/A	N/A
structural_annotation	UHGV-1379676_16	PF02924	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379676_17	1298920.KI911353_gene2662	59.7	0.0000000306	N/A	N/A
structural_annotation	UHGV-1379676_17	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_18	phrog_2468	49.2	0.000000000000065	head morphogenesis	head and packaging
UniRef90	UHGV-1379676_18	UniRef90_K1V7A5	184.0	0	Phage Mu protein F like protein	N/A
COG	UHGV-1379676_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379676_18	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_19	phrog_64	188.0	0	portal protein	head and packaging
UniRef90	UHGV-1379676_19	UniRef90_A0A412EMP0	851.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1379676_19	1298920.KI911353_gene2663	568.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1379676_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1379676_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_20	phrog_36	54.9	0.0000000000000018	transcriptional regulator	transcription regulation
UniRef90	UHGV-1379676_20	UniRef90_A0A412EN86	96.3	8.88e-23	N/A	N/A
eggNOG-mapper	UHGV-1379676_20	742741.HMPREF9475_02386	64.7	0.0000000000297	sigma factor activity	N/A
COG	UHGV-1379676_20	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1379676_20	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_21	phrog_38	159.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1379676_21	UniRef90_A0A7X2P7N6	468.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1379676_21	476272.RUMHYD_01940	904.0	0	TIGRFAM Phage	N/A
COG	UHGV-1379676_21	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379676_21	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-1379676_22	K14415	338.8	0	RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]	N/A
PHROG	UHGV-1379676_22	phrog_1075	437.1	0	tRNA splicing ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379676_22	UniRef90_UPI001898CD6A	613.0	0	RtcB family protein	N/A
eggNOG-mapper	UHGV-1379676_22	397290.C810_01387	560.0	0	tRNA-splicing ligase RtcB	N/A
Pfam	UHGV-1379676_22	PF01139	N/A	N/A	tRNA-splicing ligase RtcB	RtcB
COG	UHGV-1379676_22	COG1690	N/A	N/A	RNA-splicing ligase RtcB, repairs tRNA damage	N/A
structural_annotation	UHGV-1379676_22	PF01139,MF_03144,NF007153,COG1690	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_29	phrog_6730	67.0	1.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-1379676_29	1136534.J9PTY8_9CAUD	57.0	0.00000000197	N/A	N/A
structural_annotation	UHGV-1379676_29	PF00684	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1379676_32	411473.RUMCAL_02525	116.0	1.57e-32	N/A	N/A
PHROG	UHGV-1379676_34	phrog_953	139.9	1.49995e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379676_34	UniRef90_A0A7V8IDJ8	162.0	0	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_34	1235800.C819_00973	149.0	6.21994e-41	N/A	N/A
eggNOG-mapper	UHGV-1379676_35	476272.RUMHYD_01907	116.0	1.05e-29	N/A	N/A
eggNOG-mapper	UHGV-1379676_40	658655.HMPREF0988_00903	49.7	0.000000274	N/A	N/A
PHROG	UHGV-1379676_45	phrog_14903	52.4	0.0000000000000084	N/A	unknown function
PHROG	UHGV-1379676_48	phrog_8680	196.7	0	N/A	unknown function
UniRef90	UHGV-1379676_48	UniRef90_A0A3R6E2A5	248.0	0	N/A	N/A
eggNOG-mapper	UHGV-1379676_48	476272.RUMHYD_01896	219.0	0	N/A	N/A
Pfam	UHGV-1379676_48	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1379676_48	PF14386	N/A	N/A	N/A	N/A
KOfam	UHGV-1379676_49	K14059	166.1	0	int; integrase	N/A
PHROG	UHGV-1379676_49	phrog_1	156.1	0	integrase	integration and excision
UniRef90	UHGV-1379676_49	UniRef90_UPI001960406E	385.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1379676_49	397291.C804_00897	376.0	0	Phage integrase family	N/A
Pfam	UHGV-1379676_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1379676_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1379676_49	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1379676_51	K02315	155.4	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1379676_51	phrog_50	157.3	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379676_51	UniRef90_A0A3E5ENL1	344.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_51	742733.HMPREF9469_01844	216.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-1379676_51	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-1379676_51	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-1379676_51	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_52	phrog_11769	153.5	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1379676_52	UniRef90_A0A317UCF5	310.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_52	1414720.CBYM010000001_gene675	231.0	0	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-1379676_52	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1379676_52	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
structural_annotation	UHGV-1379676_52	PF09681,TIGR01714,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_54	phrog_2470	64.9	1.2e-18	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1379676_54	UniRef90_UPI0019236C01	146.0	7.14662e-44	N/A	N/A
eggNOG-mapper	UHGV-1379676_54	319236.JCM19294_1043	59.3	0.00000000297	N/A	N/A
Pfam	UHGV-1379676_54	PF11750	N/A	N/A	N/A	DUF3307
structural_annotation	UHGV-1379676_54	PF11750	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379676_55	TIGR04116	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379676_56	PF17630	N/A	N/A	N/A	N/A
UniRef90	UHGV-1379676_57	UniRef90_A0A415TX35	159.0	0	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_57	397290.C810_01492	51.2	0.00000686	N/A	N/A
PHROG	UHGV-1379676_61	phrog_21101	44.3	0.00000000000057	N/A	unknown function
UniRef90	UHGV-1379676_61	UniRef90_A0A3E5ENM1	134.0	1.65e-39	N/A	N/A
eggNOG-mapper	UHGV-1379676_61	1128111.HMPREF0870_00767	80.5	8.31e-19	N/A	N/A
Pfam	UHGV-1379676_61	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-1379676_61	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1379676_61	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-1379676_62	phrog_20593	60.0	3.7e-17	N/A	unknown function
PHROG	UHGV-1379676_64	phrog_3377	126.9	1.3e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1379676_64	UniRef90_A0A3G8F4C5	114.0	3.69e-30	HTH psq-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1379676_64	1159488.SEQMU2_01825	109.0	2.52e-28	N/A	N/A
UniRef90	UHGV-1379676_65	UniRef90_A0A373NR41	76.3	0.00000000000000141	N/A	N/A
Pfam	UHGV-1379676_65	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1379676_66	PF17888	N/A	N/A	N/A	N/A
KOfam	UHGV-1379676_69	K19779	47.7	0.00000000000022	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-1379676_69	phrog_599	54.2	0.0000000000000034	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1379676_69	UniRef90_A0A8J6MB86	66.6	0.000000000000873	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1379676_69	220341.16503116	49.7	0.00000057	Toxic component of a type I toxin-antitoxin (TA) system. Upon overexpression inhibits growth and reduces colony-forming units in both the presence and absence of the Rac prophage, cells become filamentous. Has deoxyribonuclease activity (probably endonucleolytic), does not digest RNA. Its toxic effects are neutralized by sRNA antitoxin RalA, which is encoded in trans on the opposite DNA strand. Has RAL-like activity	N/A
Pfam	UHGV-1379676_69	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-1379676_69	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-1379676_69	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-1379676_69	PF14354,TIGR03655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1379676	Yes	39,496	39	51	1