vOTU vOTU-166145

vOTU: vOTU-166145

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-166145
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00048 → vGENUS-00024 → vOTU-166145
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1431848
Biosample ID	N/A
Genome length (bp)	40,305 bps
CheckV completeness	68.35% (Medium-quality)
CDS count	58
CDS density	86.91%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	3241	Host agreement	84.67
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	11	Host agreement	81.82

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1431848_2	K03111	113.0	4.2e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1431848_2	phrog_44	119.7	2.6e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431848_2	UniRef90_A0A412RR48	238.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1431848_2	397290.C810_01495	190.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1431848_2	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1431848_2	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1431848_2	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1431848_2	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1431848_2	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_3	phrog_20891	70.2	2.8e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431848_3	UniRef90_UPI0013794BCD	195.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1431848_3	864702.OsccyDRAFT_0645	63.9	0.000000000266	HNH endonuclease	N/A
Pfam	UHGV-1431848_3	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1431848_3	PF13392	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_4	phrog_392	113.0	2.1e-33	metal-dependent hydrolase	other
UniRef90	UHGV-1431848_4	UniRef90_A0A412RQX2	334.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-1431848_4	1232453.BAIF02000057_gene1138	103.0	1.77e-25	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-1431848_4	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-1431848_4	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_6	phrog_25456	87.3	1.3e-25	N/A	unknown function
PHROG	UHGV-1431848_7	phrog_10056	180.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431848_7	UniRef90_A0A412RR22	474.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-1431848_7	397290.C810_01467	319.0	0	Phage recombination protein Bet	N/A
Pfam	UHGV-1431848_7	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1431848_7	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-1431848_7	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1431848_7	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1431848_11	K19171	80.4	1.6e-23	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1431848_11	phrog_77	165.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431848_11	UniRef90_A0A412RQV0	961.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_11	397290.C810_01461	352.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1431848_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1431848_11	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_12	UniRef90_A0A1L8RDA1	79.0	0.00000000000000494	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_12	742765.HMPREF9457_03017	103.0	4.4e-24	peptidase	N/A
COG	UHGV-1431848_12	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
PHROG	UHGV-1431848_13	phrog_463	210.2	0	anti-repressor	transcription regulation
UniRef90	UHGV-1431848_13	UniRef90_A0A412RQX1	350.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-1431848_13	1304866.K413DRAFT_1188	163.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1431848_13	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-1431848_13	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-1431848_13	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-1431848_13	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_14	phrog_8	53.4	0.0000000000000059	transcriptional regulator	transcription regulation
UniRef90	UHGV-1431848_14	UniRef90_UPI001C012A29	80.9	1.81e-18	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_14	1304866.K413DRAFT_0834	63.2	0.00000000000956	PFAM helix-turn-helix domain protein	N/A
Pfam	UHGV-1431848_14	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1431848_14	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-1431848_15	K22300	52.5	0.000000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1431848_15	phrog_3037	47.0	0.00000000000044	transcriptional repressor	transcription regulation
UniRef90	UHGV-1431848_15	UniRef90_A0A412RR31	116.0	2.75e-31	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_15	1232449.BAHV02000016_gene1846	60.5	0.00000000191	Peptidase S24-like	N/A
Pfam	UHGV-1431848_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1431848_15	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1431848_15	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_16	phrog_3845	47.2	0.0000000000004	N/A	unknown function
eggNOG-mapper	UHGV-1431848_16	1262449.CP6013_3208	48.1	0.00000756	N/A	N/A
eggNOG-mapper	UHGV-1431848_18	476272.RUMHYD_01994	66.6	0.0000000033	N/A	N/A
PHROG	UHGV-1431848_19	phrog_6616	509.6	0	tail protein	tail
UniRef90	UHGV-1431848_19	UniRef90_A0A412RR71	1381.0	0	Tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_19	476272.RUMHYD_01992	362.0	0	N/A	N/A
Pfam	UHGV-1431848_19	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1431848_19	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_20	phrog_1194	116.5	1.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1431848_20	86416.Clopa_0588	85.9	4.09e-20	N/A	N/A
Pfam	UHGV-1431848_20	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1431848_20	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_21	phrog_1535	133.7	4.39994e-41	tail length tape measure protein	tail
UniRef90	UHGV-1431848_21	UniRef90_A0A173UHS1	335.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1431848_21	397290.C810_01419	131.0	3.94e-28	Transglycosylase SLT domain	N/A
COG	UHGV-1431848_21	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-1431848_22	phrog_314	85.5	6e-25	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431848_22	UniRef90_A0A173UI60	404.0	0	Group I intron endonuclease	N/A
eggNOG-mapper	UHGV-1431848_22	1380384.JADN01000003_gene632	94.0	3.62e-20	Intron encoded nuclease repeat motif	N/A
Pfam	UHGV-1431848_22	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-1431848_22	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
NCBIFam	UHGV-1431848_22	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-1431848_22	PF07453,PF19835,PF04936,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_23	phrog_1535	69.5	1.8e-20	tail length tape measure protein	tail
UniRef90	UHGV-1431848_23	UniRef90_A0A173UI54	248.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1431848_23	1408437.JNJN01000010_gene1238	156.0	1.32e-39	domain protein	N/A
COG	UHGV-1431848_23	COG1511	N/A	N/A	N/A	N/A
KOfam	UHGV-1431848_24	K07273	154.5	1.4013e-45	acm; lysozyme	N/A
PHROG	UHGV-1431848_24	phrog_291	128.1	8.8e-38	endolysin	lysis
UniRef90	UHGV-1431848_24	UniRef90_A0A174GRH8	583.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-1431848_24	1235800.C819_00458	224.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1431848_24	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1431848_24	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1431848_24	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_27	UniRef90_R7BGF5	90.1	8.83e-20	Phage tail protein	N/A
structural_annotation	UHGV-1431848_27	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_28	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1431848_29	1232453.BAIF02000058_gene1631	119.0	1.38e-31	N/A	N/A
AcrCatalog	UHGV-1431848_29	cluster_24841	151.0	0	NA	N/A
eggNOG-mapper	UHGV-1431848_30	1298920.KI911353_gene2656	58.9	0.00000000426	N/A	N/A
structural_annotation	UHGV-1431848_30	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_31	phrog_1129	77.4	1.1e-22	holin	lysis
UniRef90	UHGV-1431848_31	UniRef90_A0A412RR82	166.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1431848_31	411461.DORFOR_00721	89.0	4e-22	N/A	N/A
Pfam	UHGV-1431848_31	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1431848_31	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_32	phrog_4105	76.2	6.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-1431848_32	411459.RUMOBE_00911	142.0	9.16449e-43	N/A	N/A
eggNOG-mapper	UHGV-1431848_33	397290.C810_01402	63.9	0.0000000000176	N/A	N/A
UniRef90	UHGV-1431848_34	UniRef90_A0A8D9UIY7	60.8	0.000000000261	Rho termination factor	N/A
structural_annotation	UHGV-1431848_34	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_35	phrog_29	154.0	1.4013e-45	major head protein	head and packaging
UniRef90	UHGV-1431848_35	UniRef90_A0A412RQU1	704.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1431848_35	1296659.S5MNB6_9CAUD	169.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1431848_35	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1431848_35	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_36	phrog_909	77.7	1.1e-22	major head protein	head and packaging
UniRef90	UHGV-1431848_36	UniRef90_R7BGI8	193.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1431848_36	1078085.HMPREF1210_01145	60.8	0.00000000017	N/A	N/A
UniRef90	UHGV-1431848_37	UniRef90_UPI000E41BB01	55.8	0.00000232	N/A	N/A
PHROG	UHGV-1431848_38	phrog_13589	109.0	2.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1431848_38	428125.CLOLEP_01434	110.0	5.08e-26	N/A	N/A
PHROG	UHGV-1431848_39	phrog_13589	196.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1431848_39	742733.HMPREF9469_05009	268.0	0	N/A	N/A
PHROG	UHGV-1431848_40	phrog_31538	81.6	8.8e-24	N/A	unknown function
PHROG	UHGV-1431848_41	phrog_15594	104.2	6.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-1431848_41	1118055.CAGU01000013_gene763	50.1	0.00000151	N/A	N/A
structural_annotation	UHGV-1431848_41	PF16640,TIGR04488	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_42	PF00041	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_43	phrog_2662	59.5	3.6e-17	portal protein	head and packaging
UniRef90	UHGV-1431848_43	UniRef90_A0A412RR50	398.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_43	1207076.ALAT01000105_gene1902	54.3	0.00000519	head morphogenesis protein, SPP1	N/A
Pfam	UHGV-1431848_43	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1431848_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_43	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_44	phrog_64	150.4	8.40779e-45	portal protein	head and packaging
UniRef90	UHGV-1431848_44	UniRef90_A0A412RQZ0	931.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1431848_44	1232453.BAIF02000058_gene1625	340.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1431848_44	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1431848_44	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_45	UniRef90_A0A8D9UIR9	76.6	5.42e-17	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1431848_46	phrog_36	57.9	2.1e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1431848_46	397290.C810_01391	167.0	0	N/A	N/A
structural_annotation	UHGV-1431848_46	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_47	phrog_38	145.6	3.40516e-43	terminase large subunit	head and packaging
UniRef90	UHGV-1431848_47	UniRef90_A0A352SH30	1002.0	0	Terminase_6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_47	397290.C810_01390	677.0	0	chromosome segregation	N/A
COG	UHGV-1431848_47	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_47	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_48	UniRef90_UPI0011072322	76.6	0.00000000000000102	N/A	N/A
eggNOG-mapper	UHGV-1431848_48	411473.RUMCAL_00360	73.9	0.00000000000000169	N/A	N/A
structural_annotation	UHGV-1431848_48	PF14359,COG3613	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_49	NF040508	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431848_53	PF04466	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_54	UniRef90_A0A8D9PGW1	56.6	0.00000000301	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1431848_54	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_55	phrog_22444	80.6	1.3e-23	N/A	unknown function
UniRef90	UHGV-1431848_55	UniRef90_UPI001CC2634F	143.0	4.6e-36	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1431848_55	1121422.AUMW01000042_gene1260	159.0	2.56438e-43	DnaD domain protein	N/A
COG	UHGV-1431848_55	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1431848_55	PF05584,NF000243,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1431848_57	phrog_236	53.8	0.0000000000000046	nucleotide kinase	other
UniRef90	UHGV-1431848_57	UniRef90_A0A412RQV8	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-1431848_57	1200557.JHWV01000001_gene285	72.4	0.000000000000208	N/A	N/A
Pfam	UHGV-1431848_57	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1431848_57	PF11753	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431848_58	UniRef90_A0A8D9UIS5	107.0	3.75e-25	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1431848_58	658655.HMPREF0988_00895	129.0	8.67e-36	N/A	N/A
structural_annotation	UHGV-1431848_58	PF16677	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1431848	Yes	40,305	39	68	1
UHGV-0183315	No	40,285	39	68	1
UHGV-0075841	No	40,261	39	68	1