vOTU vOTU-166687

vOTU: vOTU-166687

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-166687
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-07155 → vGENUS-19350 → vOTU-166687
Host lineage
Host range breadth
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-1403011
Biosample ID	N/A
Genome length (bp)	28,436 bps
CheckV completeness	85.93% (Medium-quality)
CDS count	35
CDS density	92.73%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.93)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1403011_1	K00962	560.5	0	pnp, PNPT1; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]	N/A
UniRef90	UHGV-1403011_1	UniRef90_C8NFP4	745.0	0	Polyribonucleotide nucleotidyltransferase	N/A
eggNOG-mapper	UHGV-1403011_1	626369.HMPREF0446_01292	769.0	0	Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction	N/A
Pfam	UHGV-1403011_1	PF01138	N/A	N/A	3' exoribonuclease family, domain 1	RNase_PH
Pfam	UHGV-1403011_1	PF03725	N/A	N/A	3' exoribonuclease family, domain 2	RNase_PH_C
Pfam	UHGV-1403011_1	PF03726	N/A	N/A	Polyribonucleotide nucleotidyltransferase, RNA binding domain	PNPase
NCBIFam	UHGV-1403011_1	NF008805.1	N/A	N/A	polyribonucleotide nucleotidyltransferase	N/A
COG	UHGV-1403011_1	COG1185	N/A	N/A	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	N/A
KOfam	UHGV-1403011_2	K00689	57.7	4.1e-20	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1403011_2	phrog_670	112.6	2.3e-33	endolysin	lysis
UniRef90	UHGV-1403011_2	UniRef90_UPI00094E99B5	366.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1403011_2	585203.SMSK564_1271	310.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1403011_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1403011_2	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1403011_2	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
structural_annotation	UHGV-1403011_2	PF01510,PF19127,MF_04111,TIGR04035,NF008758,COG5263,COG3023	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_3	phrog_32123	281.3	0	N/A	unknown function
UniRef90	UHGV-1403011_3	UniRef90_UPI001BD93596	284.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1403011_3	997830.HMPREF1124_0614	259.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1403011_3	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
PHROG	UHGV-1403011_5	phrog_1529	50.8	0.00000000000004	N/A	unknown function
COG	UHGV-1403011_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1403011_5	PF01381,TIGR02607,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1403011_7	K00689	41.8	0.00000000000001	E2.4.1.5; dextransucrase [EC:2.4.1.5]	N/A
PHROG	UHGV-1403011_7	phrog_670	112.9	3e-33	endolysin	lysis
UniRef90	UHGV-1403011_7	UniRef90_UPI00094E99B5	329.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1403011_7	585203.SMSK564_1271	298.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1403011_7	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1403011_7	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
COG	UHGV-1403011_7	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-1403011_8	phrog_32123	309.7	0	N/A	unknown function
UniRef90	UHGV-1403011_8	UniRef90_UPI00094EEBC2	438.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1403011_8	997830.HMPREF1124_0614	419.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1403011_8	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1403011_8	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_9	phrog_608	63.3	2.1e-18	holin	lysis
UniRef90	UHGV-1403011_9	UniRef90_UPI00066CB494	117.0	6.94e-32	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-1403011_9	1336234.JAGN01000004_gene510	56.2	0.000000017	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1403011_9	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1403011_9	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_10	phrog_4257	93.8	1.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-1403011_10	997830.HMPREF1124_0612	59.3	0.00000000401	N/A	N/A
PHROG	UHGV-1403011_12	phrog_22481	69.4	3e-20	N/A	unknown function
PHROG	UHGV-1403011_14	phrog_1210	169.3	0	PblB-type receptor binding	other
UniRef90	UHGV-1403011_14	UniRef90_A0A139Q9L9	260.0	0	Phage hyaluronidase	N/A
eggNOG-mapper	UHGV-1403011_14	768726.HMPREF9178_1052	144.0	1.53e-33	N/A	N/A
Pfam	UHGV-1403011_14	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1403011_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1403011_14	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1403011_14	PF13884	N/A	N/A	N/A	N/A
KOfam	UHGV-1403011_16	K16628	73.4	7.7e-22	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-1403011_16	phrog_27035	183.8	0	N/A	unknown function
UniRef90	UHGV-1403011_16	UniRef90_A0A0T8EK90	219.0	0	Hyaluronoglucosaminidase	N/A
eggNOG-mapper	UHGV-1403011_16	173707.Q938K0_9CAUD	56.2	0.00000374	hyalurononglucosaminidase activity	N/A
Pfam	UHGV-1403011_16	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
Pfam	UHGV-1403011_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1403011_16	PF03422,PF18454,NF033675,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_17	phrog_2189	437.0	0	tail protein	tail
UniRef90	UHGV-1403011_17	UniRef90_A0A0U0KNU3	508.0	0	Bacteriophage PblB	N/A
eggNOG-mapper	UHGV-1403011_17	1316408.HSISM1_1246	425.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1403011_17	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1403011_17	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1403011_17	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1403011_17	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1403011_17	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_18	phrog_33	47.1	0.0000000000005	distal tail protein Dit	tail
UniRef90	UHGV-1403011_18	UniRef90_A0A075SGD2	301.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1403011_18	1123314.AUIO01000016_gene850	305.0	0	N/A	N/A
structural_annotation	UHGV-1403011_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_19	phrog_5755	361.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1403011_19	UniRef90_C8NHV3	978.0	0	Phage tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1403011_19	638301.HMPREF0444_1498	978.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1403011_19	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-1403011_19	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1403011_19	PF10145,MF_04138,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_20	phrog_709	95.9	3.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1403011_20	1497679.EP56_05775	82.4	2.17e-18	N/A	N/A
structural_annotation	UHGV-1403011_20	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_21	phrog_88	152.5	1.4013e-45	major tail protein	tail
UniRef90	UHGV-1403011_21	UniRef90_C8NHV5	207.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1403011_21	638301.HMPREF0444_1500	207.0	0	phage tail protein	N/A
NCBIFam	UHGV-1403011_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1403011_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_22	phrog_78	46.1	0.00000000000094	tail terminator	connector
UniRef90	UHGV-1403011_22	UniRef90_A0A0Z8KW16	79.3	4.38e-17	Prophage pi2 protein 38	N/A
eggNOG-mapper	UHGV-1403011_22	638301.HMPREF0444_1501	135.0	7.02e-40	N/A	N/A
structural_annotation	UHGV-1403011_22	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_23	phrog_5	52.7	0.000000000000011	tail completion or Neck1 protein	connector
UniRef90	UHGV-1403011_23	UniRef90_UPI0018CCD11B	88.2	3.24e-20	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1403011_23	638301.HMPREF0444_1502	138.0	8.24006e-41	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1403011_23	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1403011_23	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_24	phrog_1951	85.9	3e-25	head-tail adaptor	connector
UniRef90	UHGV-1403011_24	UniRef90_C8NHV8	135.0	3.22e-39	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-1403011_24	638301.HMPREF0444_1503	135.0	5.4e-40	head-tail adaptor	N/A
NCBIFam	UHGV-1403011_24	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1403011_24	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1403011_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_25	phrog_2550	92.5	1.7e-27	N/A	unknown function
UniRef90	UHGV-1403011_25	UniRef90_A0AI13	78.2	1.36e-16	Conserved phage-related protein	N/A
eggNOG-mapper	UHGV-1403011_25	638301.HMPREF0444_1504	103.0	6.28e-27	N/A	N/A
PHROG	UHGV-1403011_26	phrog_3673	53.6	0.0000000000000014	Arc-like repressor	transcription regulation
eggNOG-mapper	UHGV-1403011_26	1033743.CAES01000020_gene3138	48.5	0.00000171	N/A	N/A
PHROG	UHGV-1403011_27	phrog_10	155.6	0	major head protein	head and packaging
UniRef90	UHGV-1403011_27	UniRef90_C8NHW0	341.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-1403011_27	638301.HMPREF0444_1505	341.0	0	Phage capsid family	N/A
Pfam	UHGV-1403011_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1403011_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1403011_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1403011_27	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1403011_28	K06904	122.7	3.7e-36	N/A	N/A
PHROG	UHGV-1403011_28	phrog_80	163.6	0	head maturation protease	head and packaging
UniRef90	UHGV-1403011_28	UniRef90_C8NHW2	223.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-1403011_28	638301.HMPREF0444_1507	223.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-1403011_28	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1403011_28	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1403011_28	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1403011_28	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_29	phrog_12	172.4	0	portal protein	head and packaging
UniRef90	UHGV-1403011_29	UniRef90_C8NHW3	565.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1403011_29	638301.HMPREF0444_1508	565.0	0	Phage portal protein	N/A
Pfam	UHGV-1403011_29	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1403011_29	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1403011_29	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1403011_29	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_30	phrog_9	310.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1403011_30	UniRef90_C8NHW4	973.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1403011_30	638301.HMPREF0444_1509	973.0	0	Phage Terminase	N/A
Pfam	UHGV-1403011_30	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1403011_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1403011_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1403011_30	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_31	phrog_361	111.3	5.7e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1403011_31	UniRef90_A0A414CIM9	138.0	6.97999e-40	POU-specific domain-containing protein	N/A
eggNOG-mapper	UHGV-1403011_31	638301.HMPREF0444_1510	174.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-1403011_31	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-1403011_31	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1403011_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_32	phrog_119	53.7	0.0000000000000029	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403011_32	UniRef90_A0A0M9FL41	110.0	1.74e-29	Endonuclease	N/A
eggNOG-mapper	UHGV-1403011_32	638301.HMPREF0444_1511	118.0	1.6e-33	HNH nucleases	N/A
COG	UHGV-1403011_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-1403011_33	K04763	103.3	3.2e-30	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-1403011_33	phrog_216	181.9	0	integrase	integration and excision
UniRef90	UHGV-1403011_33	UniRef90_C8NHW7	288.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-1403011_33	638301.HMPREF0444_1512	288.0	0	Phage integrase family	N/A
Pfam	UHGV-1403011_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1403011_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1403011_33	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-1403011_34	phrog_248	91.0	1.5e-26	transcriptional activator	transcription regulation
UniRef90	UHGV-1403011_34	UniRef90_C8NHW8	153.0	8.40779e-45	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-1403011_34	638301.HMPREF0444_1513	153.0	1.4013e-45	ArpU family	N/A
NCBIFam	UHGV-1403011_34	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
COG	UHGV-1403011_34	COG0677	N/A	N/A	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	N/A
KOfam	UHGV-1403011_35	K06191	78.0	1.4e-22	nrdH; glutaredoxin-like protein NrdH	N/A
PHROG	UHGV-1403011_35	phrog_22	61.3	1.6e-17	thioredoxin domain	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1403011_35	UniRef90_A0A1B2IZN7	81.3	1.18e-18	Glutaredoxin-like protein NrdH	N/A
eggNOG-mapper	UHGV-1403011_35	1138822.PL11_06410	81.3	1.98e-19	Glutaredoxin	N/A
Pfam	UHGV-1403011_35	PF00462	N/A	N/A	Glutaredoxin	Glutaredoxin
NCBIFam	UHGV-1403011_35	TIGR02194.1	N/A	N/A	glutaredoxin-like protein NrdH	N/A
COG	UHGV-1403011_35	COG0695	N/A	N/A	Glutaredoxin	N/A
structural_annotation	UHGV-1403011_35	PF00462,MF_01132,NF007657,COG0695	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1403011	Yes	28,436	36	86	1