vOTU vOTU-166873

vOTU: vOTU-166873

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-166873
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00139 → vOTU-166873
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1501547
Biosample ID	N/A
Genome length (bp)	33,303 bps
CheckV completeness	74.15% (Medium-quality)
CDS count	51
CDS density	94.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	19	Host agreement	84.21
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1501547_1	K01447	110.1	2.7e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1501547_1	phrog_670	122.7	3.6e-36	endolysin	lysis
UniRef90	UHGV-1501547_1	UniRef90_UPI00156EE520	439.0	0	amidase	N/A
eggNOG-mapper	UHGV-1501547_1	411490.ANACAC_00703	229.0	0	Ami_2	N/A
Pfam	UHGV-1501547_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1501547_1	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1501547_1	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1501547_1	PF01510,PF08239,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_2	phrog_962	73.7	2.5e-21	holin	lysis
UniRef90	UHGV-1501547_2	UniRef90_UPI0015714279	139.0	9.77994e-41	phage holin	N/A
eggNOG-mapper	UHGV-1501547_2	1120998.AUFC01000030_gene2252	94.0	4.62e-24	Bacteriophage holin	N/A
Pfam	UHGV-1501547_2	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1501547_2	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1501547_2	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501547_2	PF04531,TIGR01598,COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501547_5	PF10096,PF21644,TIGR02764,COG0726	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_7	phrog_18444	90.2	1.1e-26	N/A	unknown function
PHROG	UHGV-1501547_8	phrog_6616	423.8	0	tail protein	tail
UniRef90	UHGV-1501547_8	UniRef90_A0A1C5P1Z6	530.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1501547_8	33035.JPJF01000043_gene1002	397.0	0	N/A	N/A
structural_annotation	UHGV-1501547_8	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_9	phrog_1194	46.1	0.00000000000073	N/A	unknown function
structural_annotation	UHGV-1501547_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_10	phrog_1535	228.0	0	tail length tape measure protein	tail
UniRef90	UHGV-1501547_10	UniRef90_A0A173TXH9	537.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1501547_10	411459.RUMOBE_01384	219.0	0	phage tail tape measure protein	N/A
COG	UHGV-1501547_10	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1501547_10	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_11	phrog_706	127.9	4.1e-38	N/A	unknown function
UniRef90	UHGV-1501547_11	UniRef90_UPI00156F9D1C	235.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1501547_11	411459.RUMOBE_01383	182.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1501547_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1501547_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_12	phrog_11299	103.5	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1501547_12	33035.JPJF01000106_gene3125	102.0	5.57e-26	N/A	N/A
structural_annotation	UHGV-1501547_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_13	phrog_3099	114.5	8.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-1501547_13	476272.RUMHYD_01782	212.0	0	N/A	N/A
structural_annotation	UHGV-1501547_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_14	phrog_3266	88.3	5.6e-26	tail completion	connector
eggNOG-mapper	UHGV-1501547_14	476272.RUMHYD_01781	202.0	0	N/A	N/A
structural_annotation	UHGV-1501547_14	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_15	phrog_556	87.4	8.8e-26	minor head protein	head and packaging
UniRef90	UHGV-1501547_15	UniRef90_UPI0008B4CFF0	152.0	1.82169e-44	minor capsid protein	N/A
eggNOG-mapper	UHGV-1501547_15	476272.RUMHYD_01780	181.0	0	N/A	N/A
Pfam	UHGV-1501547_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1501547_15	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_16	phrog_3366	99.7	2.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1501547_16	476272.RUMHYD_01779	194.0	0	N/A	N/A
structural_annotation	UHGV-1501547_16	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_17	phrog_541	109.7	1.4e-32	head-tail adaptor	connector
eggNOG-mapper	UHGV-1501547_17	476272.RUMHYD_01778	150.0	2.8026e-44	N/A	N/A
PHROG	UHGV-1501547_18	phrog_544	166.6	0	major head protein	head and packaging
UniRef90	UHGV-1501547_18	UniRef90_A0A395X7A1	549.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1501547_18	1232453.BAIF02000011_gene3359	353.0	0	N/A	N/A
Pfam	UHGV-1501547_18	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1501547_18	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_19	phrog_194	72.5	7.3e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-1501547_19	UniRef90_UPI001D14C9C8	178.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1501547_19	476272.RUMHYD_01775	134.0	1.71e-36	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1501547_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-1501547_20	phrog_355	62.7	4.4e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501547_20	UniRef90_A0A417J5P5	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-1501547_20	97138.C820_00250	130.0	5e-38	N/A	N/A
Pfam	UHGV-1501547_20	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1501547_20	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_21	phrog_1233	85.1	8.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1501547_21	411490.ANACAC_00786	80.9	6.55e-18	N/A	N/A
PHROG	UHGV-1501547_22	phrog_1048	165.2	0	N/A	unknown function
UniRef90	UHGV-1501547_22	UniRef90_UPI00156DCDC3	323.0	0	N/A	N/A
eggNOG-mapper	UHGV-1501547_22	457412.RSAG_01107	238.0	0	N/A	N/A
Pfam	UHGV-1501547_22	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1501547_22	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1501547_22	PF11195	N/A	N/A	N/A	N/A
UniRef90	UHGV-1501547_23	UniRef90_A0A417UWY7	165.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-1501547_23	476272.RUMHYD_01766	53.1	0.000000132	N/A	N/A
PHROG	UHGV-1501547_24	phrog_581	241.9	0	minor head protein	head and packaging
UniRef90	UHGV-1501547_24	UniRef90_A0A373MXM0	436.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1501547_24	476272.RUMHYD_01761	411.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1501547_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1501547_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501547_24	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_25	phrog_533	318.8	0	portal protein	head and packaging
UniRef90	UHGV-1501547_25	UniRef90_A0A173TY48	564.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1501547_25	33035.JPJF01000106_gene3135	426.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1501547_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1501547_26	K06909	375.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1501547_26	phrog_3717	155.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1501547_26	UniRef90_A0A7X5CDL5	622.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1501547_26	33035.JPJF01000106_gene3136	437.0	0	Terminase small subunit	N/A
Pfam	UHGV-1501547_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1501547_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1501547_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1501547_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1501547_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_27	phrog_606	75.7	7e-22	terminase small subunit	head and packaging
UniRef90	UHGV-1501547_27	UniRef90_UPI001F487344	148.0	2.88667e-43	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1501547_27	397290.C810_05185	140.0	2.67001e-40	DNA-packaging protein gp3	N/A
Pfam	UHGV-1501547_27	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-1501547_27	PF16677	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501547_28	PF14084	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_31	phrog_229	123.4	1.5e-36	MazG-like pyrophosphatase	other
UniRef90	UHGV-1501547_31	UniRef90_D4MX08	182.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-1501547_31	428125.CLOLEP_01391	105.0	1.2e-26	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-1501547_31	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-1501547_31	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
eggNOG-mapper	UHGV-1501547_34	1408438.JADD01000021_gene397	61.2	0.00000000229	N/A	N/A
Pfam	UHGV-1501547_35	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
Pfam	UHGV-1501547_35	PF01710	N/A	N/A	Transposase	HTH_Tnp_IS630
structural_annotation	UHGV-1501547_35	PF13518,PF13613,NF040595,COG3415	N/A	N/A	N/A	N/A
Pfam	UHGV-1501547_36	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-1501547_36	PF01710,NF040595,COG3415	N/A	N/A	N/A	N/A
KOfam	UHGV-1501547_37	K07741	84.4	2.9e-24	antB; anti-repressor protein	N/A
PHROG	UHGV-1501547_37	phrog_63	192.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1501547_37	UniRef90_UPI001C0263C1	349.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1501547_37	1582156.A0A0A8WJ71_9CAUD	214.0	0	DNA binding	N/A
Pfam	UHGV-1501547_37	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-1501547_37	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-1501547_37	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
structural_annotation	UHGV-1501547_37	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1501547_38	1035196.HMPREF9998_01745	60.5	0.00000000464	N/A	N/A
PHROG	UHGV-1501547_39	phrog_16304	81.0	1.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1501547_39	742733.HMPREF9469_01845	167.0	0	N/A	N/A
Pfam	UHGV-1501547_39	PF13412	N/A	N/A	Winged helix-turn-helix DNA-binding	HTH_24
structural_annotation	UHGV-1501547_39	PF10771,MF_01177,TIGR01610,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_40	phrog_1682	65.5	8.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501547_40	UniRef90_A0A173TYT6	209.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1501547_40	428125.CLOLEP_01819	103.0	9.16e-27	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1501547_40	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1501547_40	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_41	phrog_7566	88.5	4.7e-26	N/A	unknown function
UniRef90	UHGV-1501547_41	UniRef90_A0A371ATG2	98.6	6.5e-25	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-1501547_41	1304866.K413DRAFT_1198	84.7	3.31e-20	N/A	N/A
PHROG	UHGV-1501547_42	phrog_72	46.2	0.00000000000058	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501547_42	UniRef90_A0A285PU94	127.0	1.78e-33	Recombinase NinB	N/A
eggNOG-mapper	UHGV-1501547_42	411490.ANACAC_00804	240.0	0	N/A	N/A
structural_annotation	UHGV-1501547_42	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_43	phrog_155	141.1	6.50062e-42	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501547_43	UniRef90_A0A417V5L9	280.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1501547_43	929506.CbC4_1193	164.0	0	ERF superfamily	N/A
Pfam	UHGV-1501547_43	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1501547_43	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-1501547_47	K22300	42.8	0.0000000000088	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1501547_47	phrog_8	54.0	0.0000000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-1501547_47	UniRef90_A0A412RR31	63.5	0.0000000000324	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1501547_47	411460.RUMTOR_02056	59.7	0.000000000325	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1501547_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1501547_47	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1501547_47	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_49	phrog_8	60.1	4.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1501547_49	UniRef90_A0A417V5F3	116.0	1.07e-32	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1501547_49	476272.RUMHYD_02827	71.2	0.00000000000000241	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-1501547_49	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1501547_49	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
KOfam	UHGV-1501547_50	K22300	55.8	0.0000000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1501547_50	phrog_8	70.6	3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1501547_50	UniRef90_A0A417V5F8	162.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1501547_50	411459.RUMOBE_00961	94.7	2.9e-23	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1501547_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1501547_50	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1501547_50	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1501547_51	phrog_87	63.2	2.9e-18	metallo-protease	other
UniRef90	UHGV-1501547_51	UniRef90_A0A173TZ87	218.0	0	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-1501547_51	1235802.C823_04751	112.0	1.28e-29	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1501547_51	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1501547_51	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1501547_51	PF06114,COG2856	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1501547	Yes	33,303	36	74	1