vOTU vOTU-167277

vOTU: vOTU-167277

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-167277
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-05308 → vGENUS-11191 → vOTU-167277
Host lineage
Host range breadth
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1950686
Biosample ID	N/A
Genome length (bp)	33,768 bps
CheckV completeness	72.83% (Medium-quality)
CDS count	40
CDS density	91.63%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 72.83)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1950686_1	K07727	54.7	0.0000000000000027	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1950686_1	UniRef90_UPI000E4FC1F3	120.0	2.81e-34	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1950686_1	500635.MITSMUL_03282	116.0	2.66e-33	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1950686_1	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1950686_1	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-1950686_1	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_2	phrog_4031	385.4	0	N/A	unknown function
UniRef90	UHGV-1950686_2	UniRef90_A0A1Y4FAY6	743.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1950686_2	203119.Cthe_1654	319.0	0	Zn peptidase	N/A
Pfam	UHGV-1950686_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1950686_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1950686_2	PF18166,PF13560,PF06114,NF041951,NF038139,COG2856,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1950686_3	UniRef90_UPI00082D0A43	303.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-1950686_3	904144.AEJD01000006_gene539	91.3	6.16e-20	N/A	N/A
structural_annotation	UHGV-1950686_3	PF08281,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_4	phrog_355	101.1	7e-30	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1950686_4	UniRef90_UPI00082D7A9E	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-1950686_4	397291.C804_05209	130.0	1.1e-37	N/A	N/A
Pfam	UHGV-1950686_4	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1950686_4	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_5	phrog_256	962.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1950686_5	UniRef90_UPI000831FA41	1584.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-1950686_5	1235798.C817_05405	1282.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1950686_5	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-1950686_5	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-1950686_5	PF05272,NF011296,NF040562,COG5545	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1950686_6	663278.Ethha_1820	184.0	0	N/A	N/A
PHROG	UHGV-1950686_7	phrog_93	71.8	8.4e-21	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1950686_7	UniRef90_UPI0008377092	196.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1950686_7	1111454.HMPREF1250_1735	119.0	7.2e-34	VRR_NUC	N/A
structural_annotation	UHGV-1950686_7	PF01870,MF_00130,NF002584,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-1950686_8	K14440	105.7	1.4e-32	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-1950686_8	phrog_62	383.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1950686_8	UniRef90_UPI00083621C9	894.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-1950686_8	525282.HMPREF0391_10162	649.0	0	snf2 family	N/A
PADLOC	UHGV-1950686_8	DpdE_00011	58.1	6.3e-17	DpdE	DPD
Pfam	UHGV-1950686_8	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
COG	UHGV-1950686_8	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-1950686_8	PF16203,PF04851,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_9	phrog_7024	108.7	2.1e-32	N/A	unknown function
eggNOG-mapper	UHGV-1950686_9	1408437.JNJN01000033_gene2207	97.4	6.34e-26	N/A	N/A
AcrCatalog	UHGV-1950686_9	cluster_1398	95.1	1.57e-29	NA	N/A
PHROG	UHGV-1950686_10	phrog_36	87.6	1.4e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1950686_10	UniRef90_UPI0008314B32	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-1950686_10	1408437.JNJN01000033_gene2208	153.0	0	N/A	N/A
Pfam	UHGV-1950686_10	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-1950686_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1950686_10	PF07374,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-1950686_11	K07451	59.9	4.8e-17	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1950686_11	phrog_144	99.9	2e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1950686_11	UniRef90_UPI0008343220	265.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1950686_11	663278.Ethha_1826	211.0	0	HNH endonuclease	N/A
Pfam	UHGV-1950686_11	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1950686_11	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1950686_11	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_12	phrog_83	62.2	8.4e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1950686_12	UniRef90_UPI00082D838D	364.0	0	terminase	N/A
eggNOG-mapper	UHGV-1950686_12	1118057.CAGX01000043_gene499	291.0	0	N/A	N/A
Pfam	UHGV-1950686_12	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1950686_12	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-1950686_13	K07319	123.8	1.3e-36	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-1950686_13	phrog_498	521.3	0	DNA methyltransferase	other
UniRef90	UHGV-1950686_13	UniRef90_UPI000832B223	803.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-1950686_13	1408437.JNJN01000033_gene2211	732.0	0	ParB-like nuclease domain	N/A
PADLOC	UHGV-1950686_13	MTase_II_00015	511.1	0	Type II methyltransferase	RM
Pfam	UHGV-1950686_13	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1950686_13	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1950686_13	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1950686_13	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_14	phrog_2443	101.8	3.69999e-41	amidoligase enzyme	other
UniRef90	UHGV-1950686_14	UniRef90_UPI000C8520BD	319.0	0	virulence protein	N/A
eggNOG-mapper	UHGV-1950686_14	243164.DET1091	223.0	0	N/A	N/A
AcrCatalog	UHGV-1950686_14	cluster_14489	141.0	5.59118e-43	NA	N/A
PHROG	UHGV-1950686_15	phrog_3782	121.5	1.3e-36	N/A	unknown function
UniRef90	UHGV-1950686_15	UniRef90_UPI00082D9EB7	142.0	4.07778e-43	N/A	N/A
eggNOG-mapper	UHGV-1950686_15	1410624.JNKK01000017_gene1969	116.0	2.52e-33	N/A	N/A
Pfam	UHGV-1950686_15	PF14192	N/A	N/A	N/A	DUF4314
COG	UHGV-1950686_15	COG2105	N/A	N/A	Predicted gamma-glutamylamine cyclotransferase YtfP, GGCT/AIG2-like family	N/A
structural_annotation	UHGV-1950686_15	PF14192,MF_00754,NF003018	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_16	phrog_8677	94.7	3.5e-28	N/A	unknown function
UniRef90	UHGV-1950686_16	UniRef90_UPI000829F5C9	116.0	3.31e-33	N/A	N/A
eggNOG-mapper	UHGV-1950686_16	243164.DET1089	95.9	1.17e-25	N/A	N/A
Pfam	UHGV-1950686_16	PF16468	N/A	N/A	N/A	DUF5049
structural_annotation	UHGV-1950686_16	PF16468	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_17	phrog_21141	67.8	1.1e-19	N/A	unknown function
UniRef90	UHGV-1950686_17	UniRef90_A0A0D0SC67	63.2	0.000000000487	TWA4_scaffold00001, whole genome shotgun sequence	N/A
eggNOG-mapper	UHGV-1950686_17	397288.C806_00755	123.0	4.91e-34	N/A	N/A
AcrCatalog	UHGV-1950686_17	cluster_5293	60.1	0.0000000000000361	NA	N/A
structural_annotation	UHGV-1950686_17	PF04232,MF_01122,NF003088	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_19	phrog_4709	83.8	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1950686_19	663278.Ethha_1834	87.0	9.6e-22	N/A	N/A
AcrCatalog	UHGV-1950686_19	cluster_3300	77.8	1.49e-22	NA	N/A
PHROG	UHGV-1950686_20	phrog_9	481.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-1950686_20	UniRef90_UPI00164D799B	1099.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1950686_20	1121334.KB911068_gene2288	981.0	0	large subunit	N/A
Pfam	UHGV-1950686_20	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1950686_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1950686_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1950686_20	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_21	phrog_12	415.0	0	portal protein	head and packaging
UniRef90	UHGV-1950686_21	UniRef90_UPI00083155DA	882.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1950686_21	938289.CAJN020000007_gene294	686.0	0	Phage portal protein	N/A
Pfam	UHGV-1950686_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1950686_21	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1950686_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1950686_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1950686_22	K01358	160.8	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1950686_22	phrog_94	249.1	0	head maturation protease	head and packaging
UniRef90	UHGV-1950686_22	UniRef90_UPI00093D24DF	471.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1950686_22	938289.CAJN020000007_gene295	301.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1950686_22	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1950686_22	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1950686_22	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_23	phrog_10	318.8	0	major head protein	head and packaging
UniRef90	UHGV-1950686_23	UniRef90_UPI00083702D3	775.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1950686_23	1111121.HMPREF1247_1232	610.0	0	capsid protein	N/A
Pfam	UHGV-1950686_23	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1950686_23	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1950686_23	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1950686_23	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_24	phrog_40	48.9	0.000000000000097	head-tail adaptor Ad1	connector
UniRef90	UHGV-1950686_24	UniRef90_UPI00082FEA41	172.0	0	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1950686_24	742741.HMPREF9475_02373	98.2	9.96e-26	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1950686_24	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-1950686_24	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-1950686_24	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_25	phrog_25	66.8	3e-19	head closure Hc1	connector
UniRef90	UHGV-1950686_25	UniRef90_UPI0008375D37	230.0	0	phage head closure protein	N/A
eggNOG-mapper	UHGV-1950686_25	411490.ANACAC_00735	119.0	1.21e-33	Phage head-tail joining protein	N/A
Pfam	UHGV-1950686_25	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1950686_25	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1950686_25	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1950686_25	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_26	phrog_5	45.9	0.0000000000014	tail completion or Neck1 protein	connector
UniRef90	UHGV-1950686_26	UniRef90_UPI00082989AC	234.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1950686_26	888821.HMPREF9394_1015	115.0	1.83e-31	N/A	N/A
Pfam	UHGV-1950686_26	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-1950686_26	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_27	phrog_78	48.7	0.00000000000013	tail terminator	connector
eggNOG-mapper	UHGV-1950686_27	742741.HMPREF9475_02370	155.0	0	N/A	N/A
structural_annotation	UHGV-1950686_27	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_28	phrog_88	165.9	0	major tail protein	tail
UniRef90	UHGV-1950686_28	UniRef90_A0A3D5L5I4	378.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1950686_28	1280681.AUJZ01000038_gene339	242.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1950686_28	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1950686_28	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1950686_29	1280681.AUJZ01000038_gene340	61.6	0.000000000165	N/A	N/A
structural_annotation	UHGV-1950686_29	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_30	phrog_3033	50.0	0.000000000000043	N/A	unknown function
eggNOG-mapper	UHGV-1950686_30	1280671.AUJH01000012_gene3142	50.4	0.0000000625	N/A	N/A
PHROG	UHGV-1950686_31	phrog_5755	128.0	8.1e-38	tail length tape measure protein	tail
UniRef90	UHGV-1950686_31	UniRef90_F0YXA4	97.4	7.42e-24	Tail tape measure protein, TP901 family	N/A
eggNOG-mapper	UHGV-1950686_31	1280671.AUJH01000012_gene3140	108.0	4.55e-26	Phage-related minor tail protein	N/A
COG	UHGV-1950686_31	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1950686_31	PF16535	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_32	phrog_991	230.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1950686_32	UniRef90_A0A3D5KXW6	662.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1950686_32	663278.Ethha_1846	331.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1950686_32	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1950686_32	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1950686_32	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1950686_33	946235.CAER01000065_gene2434	59.7	0.000000000863	N/A	N/A
structural_annotation	UHGV-1950686_33	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1950686_34	phrog_23052	300.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1950686_34	946235.CAER01000065_gene2433	270.0	0	N/A	N/A
PHROG	UHGV-1950686_35	phrog_4176	50.9	0.000000000000029	tail fiber protein	tail
eggNOG-mapper	UHGV-1950686_37	748727.CLJU_c03700	73.6	0.0000000000317	N/A	N/A
PHROG	UHGV-1950686_38	phrog_4105	108.2	3.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-1950686_38	657322.FPR_27220	96.3	2.52e-24	N/A	N/A
PHROG	UHGV-1950686_39	phrog_1129	75.8	3.5e-22	holin	lysis
UniRef90	UHGV-1950686_39	UniRef90_A0A3D5L0S0	168.0	0	Enolase	N/A
eggNOG-mapper	UHGV-1950686_39	1321782.HMPREF1986_00360	113.0	7.4e-32	N/A	N/A
Pfam	UHGV-1950686_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1950686_39	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1950686_40	K07273	217.4	0	acm; lysozyme	N/A
PHROG	UHGV-1950686_40	phrog_291	169.5	0	endolysin	lysis
UniRef90	UHGV-1950686_40	UniRef90_UPI00082C7B8F	528.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-1950686_40	1193128.A200_03694	373.0	0	lysozyme activity	N/A
Pfam	UHGV-1950686_40	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1950686_40	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-1950686_40	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1950686_40	PF01183,MF_02227,TIGR04303,COG3757	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1950686	Yes	33,768	50	73	1
UHGV-2237611	No	33,656	50	73	1