vOTU vOTU-167279

vOTU: vOTU-167279

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-167279
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00135 → vGENUS-00234 → vOTU-167279
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1398583
Biosample ID	N/A
Genome length (bp)	38,941 bps
CheckV completeness	88.17% (Medium-quality)
CDS count	65
CDS density	92.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Flavonifractor → Flavonifractor plautii	Total connections	746	Host agreement	98.12
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1398583_1	K14059	125.3	8.4e-37	int; integrase	N/A
PHROG	UHGV-1398583_1	phrog_1	158.7	0	integrase	integration and excision
UniRef90	UHGV-1398583_1	UniRef90_UPI001959BD31	611.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1398583_1	1378168.N510_03298	450.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1398583_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1398583_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1398583_1	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_2	phrog_33872	84.7	8.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-1398583_2	445972.ANACOL_00292	55.1	0.0000000181	N/A	N/A
KOfam	UHGV-1398583_3	K19370	41.4	0.000000000014	DNAJC22; DnaJ homolog subfamily C member 22	N/A
PHROG	UHGV-1398583_3	phrog_10292	76.1	2.4e-22	N/A	unknown function
UniRef90	UHGV-1398583_3	UniRef90_A0A355UYQ5	111.0	4.93e-28	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1398583_3	1514668.JOOA01000002_gene3146	112.0	1.79e-28	TM2 domain	N/A
Pfam	UHGV-1398583_3	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1398583_3	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1398583_5	K22300	43.8	0.000000000005	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1398583_5	UniRef90_UPI001A9B476A	236.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1398583_5	411471.SUBVAR_05818	106.0	5.79e-28	sequence-specific DNA binding	N/A
Pfam	UHGV-1398583_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1398583_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1398583_5	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398583_10	742738.HMPREF9460_00848	79.0	1.48e-17	N/A	N/A
structural_annotation	UHGV-1398583_10	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-1398583_13	K21919	113.4	1.9e-33	KCTD9; BTB/POZ domain-containing protein KCTD9	N/A
PHROG	UHGV-1398583_13	phrog_9562	113.3	4.5e-34	N/A	unknown function
UniRef90	UHGV-1398583_13	UniRef90_A0A6N3FDD3	234.0	0	Pentapeptide repeats (8 copies)	N/A
eggNOG-mapper	UHGV-1398583_13	1232443.BAIA02000078_gene49	160.0	0	Pentapeptide repeat protein	N/A
Pfam	UHGV-1398583_13	PF00805	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide
Pfam	UHGV-1398583_13	PF19062	N/A	N/A	N/A	DUF5758
COG	UHGV-1398583_13	COG1357	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_13	PF19062,PF13599,NF011744,COG1357	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398583_14	537013.CLOSTMETH_01718	47.4	0.00000163	N/A	N/A
structural_annotation	UHGV-1398583_15	PF09943	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_16	phrog_862	85.6	8.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1398583_16	279238.Saro_3022	120.0	1.51e-31	N/A	N/A
structural_annotation	UHGV-1398583_16	PF05037,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_17	phrog_15768	75.4	2.1e-31	N/A	unknown function
UniRef90	UHGV-1398583_17	UniRef90_UPI00189C2664	187.0	0	N/A	N/A
eggNOG-mapper	UHGV-1398583_17	203119.Cthe_2466	81.6	0.00000000000000163	N/A	N/A
Pfam	UHGV-1398583_17	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1398583_17	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1398583_18	K02314	370.8	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1398583_18	phrog_19	289.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1398583_18	UniRef90_UPI0018973262	801.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1398583_18	742738.HMPREF9460_00852	343.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-1398583_18	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1398583_18	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1398583_18	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1398583_18	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1398583_20	K01160	46.7	0.0000000000008	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1398583_20	phrog_4632	52.9	0.0000000000000013	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1398583_20	UniRef90_A0A1V5ZUM0	119.0	4.81e-32	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1398583_20	469604.HMPREF0946_00819	60.1	0.000000000645	N/A	N/A
structural_annotation	UHGV-1398583_20	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_21	PF12759	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_22	phrog_757	190.3	0	DNA methyltransferase	other
UniRef90	UHGV-1398583_22	UniRef90_UPI0018997BA1	430.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1398583_22	742733.HMPREF9469_01835	282.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1398583_22	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1398583_22	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-1398583_23	UniRef90_A0A4D7ANR2	83.6	7.1e-19	Lar family restriction alleviation protein	N/A
eggNOG-mapper	UHGV-1398583_23	742738.HMPREF9460_04054	66.2	0.000000000000709	Restriction alleviation protein Lar	N/A
structural_annotation	UHGV-1398583_23	PF14354,TIGR03655	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_24	phrog_799	99.1	4.9e-29	DNA methyltransferase	other
UniRef90	UHGV-1398583_24	UniRef90_UPI000AAF359D	129.0	3.71e-35	SAM-dependent DNA methyltransferase	N/A
eggNOG-mapper	UHGV-1398583_24	1226322.HMPREF1545_00293	152.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-1398583_24	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
eggNOG-mapper	UHGV-1398583_25	742738.HMPREF9460_04055	134.0	2.36e-39	N/A	N/A
PHROG	UHGV-1398583_27	phrog_25732	167.2	0	N/A	unknown function
structural_annotation	UHGV-1398583_27	NF011227	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_28	NF000937	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_30	phrog_38832	51.7	0.0000000000000086	N/A	unknown function
eggNOG-mapper	UHGV-1398583_30	665956.HMPREF1032_03087	93.2	2.17e-22	N/A	N/A
PHROG	UHGV-1398583_33	phrog_8684	96.5	1.6e-29	N/A	unknown function
UniRef90	UHGV-1398583_33	UniRef90_UPI001D00D0A2	286.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1398583_33	1095737.HMPREF1110_1215	112.0	7.02e-30	YopX protein	N/A
Pfam	UHGV-1398583_33	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1398583_33	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_34	phrog_924	47.4	0.0000000000004	N/A	unknown function
UniRef90	UHGV-1398583_34	UniRef90_UPI0019214AF7	154.0	0	N/A	N/A
eggNOG-mapper	UHGV-1398583_34	155864.EDL933_3275	50.1	0.00000079	N/A	N/A
Pfam	UHGV-1398583_34	PF04448	N/A	N/A	N/A	DUF551
COG	UHGV-1398583_34	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1398583_34	NF041588	N/A	N/A	N/A	N/A
UniRef90	UHGV-1398583_35	UniRef90_A0A4Y3TFR4	109.0	1.87e-27	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1398583_35	742738.HMPREF9460_00886	249.0	0	N/A	N/A
KOfam	UHGV-1398583_36	K23779	43.7	0.000000000005	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
UniRef90	UHGV-1398583_36	UniRef90_UPI001D009076	285.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1398583_36	742738.HMPREF9460_04059	278.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1398583_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1398583_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1398583_36	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1398583_37	cluster_32378	57.0	0.000000000000407	NA	N/A
KOfam	UHGV-1398583_38	K07474	73.1	8.8e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1398583_38	phrog_51	67.4	1.6e-19	terminase small subunit	head and packaging
UniRef90	UHGV-1398583_38	UniRef90_UPI001D05F697	204.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1398583_38	1316932.MHH_c17910	70.1	0.000000000000164	Terminase small subunit	N/A
Pfam	UHGV-1398583_38	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1398583_38	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-1398583_39	K06909	383.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1398583_39	phrog_5653	161.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1398583_39	UniRef90_A0A2U1BEH4	810.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1398583_39	33035.JPJF01000106_gene3136	462.0	0	Terminase small subunit	N/A
Pfam	UHGV-1398583_39	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1398583_39	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1398583_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1398583_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1398583_39	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_40	phrog_533	406.3	0	portal protein	head and packaging
UniRef90	UHGV-1398583_40	UniRef90_UPI001D078D46	882.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1398583_40	1226322.HMPREF1545_00044	785.0	0	N/A	N/A
Pfam	UHGV-1398583_40	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1398583_40	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_41	phrog_581	273.4	0	minor head protein	head and packaging
UniRef90	UHGV-1398583_41	UniRef90_UPI001D080D49	660.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1398583_41	1226322.HMPREF1545_00046	365.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1398583_41	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1398583_41	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_41	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_43	PF19593	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398583_44	1226322.HMPREF1545_00049	133.0	9.24e-38	N/A	N/A
PHROG	UHGV-1398583_45	phrog_10	176.5	0	major head protein	head and packaging
UniRef90	UHGV-1398583_45	UniRef90_U2SBS0	629.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-1398583_45	1226322.HMPREF1545_00050	629.0	0	Phage capsid family	N/A
Pfam	UHGV-1398583_45	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1398583_45	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1398583_45	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1398583_45	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398583_46	1226322.HMPREF1545_00051	209.0	0	N/A	N/A
PHROG	UHGV-1398583_47	phrog_541	110.6	8.1e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-1398583_47	1120998.AUFC01000030_gene2237	59.7	0.00000000169	N/A	N/A
PHROG	UHGV-1398583_48	phrog_3366	111.8	4.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-1398583_48	1226322.HMPREF1545_00053	204.0	0	N/A	N/A
structural_annotation	UHGV-1398583_48	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_49	phrog_556	70.8	1.6e-20	minor head protein	head and packaging
UniRef90	UHGV-1398583_49	UniRef90_UPI00195E1497	258.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1398583_49	1226322.HMPREF1545_00054	173.0	0	Minor capsid protein	N/A
Pfam	UHGV-1398583_49	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1398583_49	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_50	phrog_3266	58.7	8.8e-17	tail completion	connector
UniRef90	UHGV-1398583_50	UniRef90_A0A2Z4QA01	109.0	4.66e-28	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1398583_50	1232443.BAIA02000078_gene24	248.0	0	N/A	N/A
structural_annotation	UHGV-1398583_50	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_51	phrog_3099	90.2	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-1398583_51	1232443.BAIA02000078_gene23	317.0	0	N/A	N/A
structural_annotation	UHGV-1398583_51	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_52	phrog_11299	86.8	2.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-1398583_52	693746.OBV_18160	196.0	0	N/A	N/A
structural_annotation	UHGV-1398583_52	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_53	phrog_706	88.4	7.1e-26	N/A	unknown function
UniRef90	UHGV-1398583_53	UniRef90_UPI001D069FB9	383.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1398583_53	693746.OBV_18170	190.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1398583_53	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1398583_53	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_54	phrog_8545	47.6	0.00000000000023	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1398583_54	UniRef90_UPI001D05CE4F	75.9	0.000000000000391	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-1398583_54	1203606.HMPREF1526_01637	69.3	0.0000000000144	tRNA_anti-like	N/A
Pfam	UHGV-1398583_54	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
PHROG	UHGV-1398583_55	phrog_1535	103.1	4.4e-33	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1398583_55	693746.OBV_18190	436.0	0	domain protein	N/A
COG	UHGV-1398583_55	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398583_55	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_56	phrog_1194	63.4	3.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-1398583_56	1226322.HMPREF1545_00060	235.0	0	N/A	N/A
structural_annotation	UHGV-1398583_56	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_57	phrog_32744	608.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1398583_57	1120998.AUFC01000030_gene2247	258.0	0	N/A	N/A
structural_annotation	UHGV-1398583_57	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_59	phrog_24451	52.8	0.000000000000007	N/A	unknown function
eggNOG-mapper	UHGV-1398583_59	931276.Cspa_c10290	63.9	0.00000000000449	N/A	N/A
UniRef90	UHGV-1398583_60	UniRef90_UPI001C1090AB	105.0	2.52e-24	collagen-like protein	N/A
eggNOG-mapper	UHGV-1398583_60	1297617.JPJD01000099_gene2171	106.0	4.31e-24	Collagen triple helix repeat protein	N/A
COG	UHGV-1398583_60	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-1398583_60	PF10651,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1398583_61	phrog_13589	51.8	2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1398583_61	411471.SUBVAR_06929	345.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1398583_61	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1398583_63	phrog_27545	251.1	0	N/A	unknown function
UniRef90	UHGV-1398583_63	UniRef90_C6LG78	57.0	0.000000592	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-1398583_63	742738.HMPREF9460_00363	265.0	0	N/A	N/A
PHROG	UHGV-1398583_65	phrog_22773	102.9	1.8e-30	N/A	unknown function
UniRef90	UHGV-1398583_65	UniRef90_A0A8J6JIT9	73.9	5.06e-16	Toxin-antitoxin system toxin subunit	N/A
eggNOG-mapper	UHGV-1398583_65	742738.HMPREF9460_03965	105.0	4.79e-29	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1398583	Yes	38,941	51	88	1