vOTU vOTU-167314

vOTU: vOTU-167314

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-167314
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01049 → vGENUS-16490 → vOTU-167314
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1408175
Biosample ID	SAMN06350030
Genome length (bp)	28,652 bps
CheckV completeness	71.82% (Medium-quality)
CDS count	37
CDS density	95.08%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens	Total connections	17	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens	Total connections	125	Host agreement	98.4

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1408175_2	phrog_806	118.1	7.9e-35	N/A	unknown function
UniRef90	UHGV-1408175_2	UniRef90_UPI000F528AF7	309.0	0	N/A	N/A
eggNOG-mapper	UHGV-1408175_2	1391647.AVSV01000003_gene1524	202.0	0	N/A	N/A
Pfam	UHGV-1408175_2	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-1408175_2	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-1408175_3	K22299	73.5	4.3e-21	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1408175_3	phrog_3	61.4	4e-17	transcriptional repressor	transcription regulation
UniRef90	UHGV-1408175_3	UniRef90_UPI001D114A9A	282.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1408175_3	1121929.KB898663_gene1158	60.1	0.0000000012	Cro/C1-type HTH DNA-binding domain	N/A
PADLOC	UHGV-1408175_3	retron_type_VI_hth_cluster2_1	58.4	1.4e-16	N/A	Retron
Pfam	UHGV-1408175_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1408175_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1408175_3	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1408175_4	K07273	226.0	0	acm; lysozyme	N/A
PHROG	UHGV-1408175_4	phrog_6219	208.5	0	endolysin	lysis
UniRef90	UHGV-1408175_4	UniRef90_Q0SPG7	644.0	0	Lysozyme	N/A
eggNOG-mapper	UHGV-1408175_4	195103.CPF_0973	672.0	0	family 25	N/A
Pfam	UHGV-1408175_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1408175_4	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-1408175_4	PF07653	N/A	N/A	Variant SH3 domain	SH3_2
COG	UHGV-1408175_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1408175_4	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_5	phrog_9492	210.3	0	N/A	unknown function
UniRef90	UHGV-1408175_5	UniRef90_A0A0H2YNK8	244.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1408175_5	195103.CPF_0972	244.0	0	N/A	N/A
PHROG	UHGV-1408175_6	phrog_199	100.9	1.3e-29	holin	lysis
UniRef90	UHGV-1408175_6	UniRef90_M9Q253	264.0	0	Putative holin	N/A
eggNOG-mapper	UHGV-1408175_6	1305708.M9Q253_9CAUD	264.0	0	Pfam:Phage_holin_4_1	N/A
Pfam	UHGV-1408175_6	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1408175_6	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-1408175_6	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_7	phrog_16267	593.1	0	N/A	unknown function
UniRef90	UHGV-1408175_7	UniRef90_A0A127EGS2	1957.0	0	KID repeat family protein	N/A
eggNOG-mapper	UHGV-1408175_7	1305708.M9Q2I5_9CAUD	2214.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-1408175_7	PF05113,PF04300,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_8	phrog_1401	120.0	1.2e-35	N/A	unknown function
UniRef90	UHGV-1408175_8	UniRef90_UPI00077668B1	228.0	0	N/A	N/A
eggNOG-mapper	UHGV-1408175_8	195103.CPF_0968	239.0	0	N/A	N/A
structural_annotation	UHGV-1408175_8	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_9	phrog_15246	173.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1408175_9	195103.CPF_0967	152.0	0	N/A	N/A
PHROG	UHGV-1408175_10	phrog_1194	127.3	6e-38	N/A	unknown function
UniRef90	UHGV-1408175_10	UniRef90_A0A0L8EWZ8	145.0	4.82047e-43	N/A	N/A
eggNOG-mapper	UHGV-1408175_10	195103.CPF_0966	226.0	0	N/A	N/A
Pfam	UHGV-1408175_10	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1408175_10	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_11	phrog_1535	595.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1408175_11	UniRef90_A0A0H2YR97	1621.0	0	Putative membrane protein	N/A
eggNOG-mapper	UHGV-1408175_11	195103.CPF_0965	1621.0	0	phage tail tape measure protein	N/A
COG	UHGV-1408175_11	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_12	phrog_8355	143.1	2.90069e-43	N/A	unknown function
UniRef90	UHGV-1408175_12	UniRef90_M9Q2I4	204.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-1408175_12	1415775.U729_2613	182.0	0	N/A	N/A
Pfam	UHGV-1408175_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1408175_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_13	phrog_8300	107.5	6.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-1408175_13	195103.CPF_0963	191.0	0	N/A	N/A
structural_annotation	UHGV-1408175_13	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_14	phrog_820	130.4	8.4e-39	major tail protein	tail
eggNOG-mapper	UHGV-1408175_14	195103.CPF_0962	286.0	0	N/A	N/A
structural_annotation	UHGV-1408175_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_15	phrog_2595	125.8	2e-37	head-tail connector protein	connector
UniRef90	UHGV-1408175_15	UniRef90_UPI001C8D62C5	229.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1408175_15	195103.CPF_0961	251.0	0	N/A	N/A
Pfam	UHGV-1408175_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1408175_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_16	phrog_556	71.4	1.2e-20	minor head protein	head and packaging
UniRef90	UHGV-1408175_16	UniRef90_UPI001C8D6722	204.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1408175_16	1391647.AVSV01000003_gene1812	243.0	0	N/A	N/A
PHROG	UHGV-1408175_17	phrog_8710	151.8	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-1408175_17	1391647.AVSV01000003_gene1811	206.0	0	N/A	N/A
structural_annotation	UHGV-1408175_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_18	phrog_541	83.9	1.7e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-1408175_18	1305708.M9Q2K9_9CAUD	214.0	0	N/A	N/A
PHROG	UHGV-1408175_19	phrog_10541	81.2	1.1e-23	N/A	unknown function
UniRef90	UHGV-1408175_19	UniRef90_A0A841L8S8	79.0	4.38e-17	Rho_N domain-containing protein	N/A
eggNOG-mapper	UHGV-1408175_19	1294142.CINTURNW_1030	115.0	1.65e-32	N/A	N/A
PHROG	UHGV-1408175_20	phrog_212	294.1	0	major head protein	head and packaging
UniRef90	UHGV-1408175_20	UniRef90_UPI000DA2D108	624.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1408175_20	1294142.CINTURNW_1029	536.0	0	N/A	N/A
structural_annotation	UHGV-1408175_20	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_21	phrog_194	74.4	2.1e-21	head scaffolding protein	head and packaging
UniRef90	UHGV-1408175_21	UniRef90_UPI000DA3708E	372.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1408175_21	33035.JPJF01000030_gene2293	106.0	1.21e-25	PFAM Phage minor structural	N/A
Pfam	UHGV-1408175_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1408175_21	PF06810	N/A	N/A	N/A	N/A
UniRef90	UHGV-1408175_22	UniRef90_UPI000DCA6E38	108.0	1.48e-23	SIR2 family protein	N/A
eggNOG-mapper	UHGV-1408175_22	1403313.AXBR01000002_gene4310	160.0	2.0459e-43	N/A	N/A
PHROG	UHGV-1408175_23	phrog_419	101.9	7.2e-30	N/A	unknown function
UniRef90	UHGV-1408175_23	UniRef90_A0A4U9RIR3	137.0	1.66001e-40	N/A	N/A
eggNOG-mapper	UHGV-1408175_23	476272.RUMHYD_03324	131.0	9.36e-39	N/A	N/A
structural_annotation	UHGV-1408175_23	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_24	phrog_32767	64.0	1.9e-18	N/A	unknown function
PHROG	UHGV-1408175_26	phrog_581	336.7	0	minor head protein	head and packaging
UniRef90	UHGV-1408175_26	UniRef90_M9Q2F2	760.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1408175_26	1305708.M9Q2F2_9CAUD	760.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1408175_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1408175_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_27	phrog_533	309.2	0	portal protein	head and packaging
UniRef90	UHGV-1408175_27	UniRef90_UPI000DA2ADFF	995.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1408175_27	195103.CPF_0951	677.0	0	N/A	N/A
structural_annotation	UHGV-1408175_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1408175_29	K06909	120.3	2.2e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1408175_29	phrog_2	68.2	1.8e-19	terminase large subunit	head and packaging
UniRef90	UHGV-1408175_29	UniRef90_A0A0H2YW07	889.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1408175_29	1305708.M9Q2I1_9CAUD	912.0	0	DNA packaging	N/A
Pfam	UHGV-1408175_29	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
structural_annotation	UHGV-1408175_29	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1408175_30	K07474	110.3	3.3e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1408175_30	phrog_2606	293.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-1408175_30	UniRef90_UPI0007080FC3	452.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1408175_30	478749.BRYFOR_07604	235.0	0	terminase, small subunit	N/A
Pfam	UHGV-1408175_30	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-1408175_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1408175_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1408175_30	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_32	phrog_36	66.5	3.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1408175_32	UniRef90_A0A2Z3TRN4	352.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1408175_32	1391647.AVSV01000022_gene2550	221.0	0	N/A	N/A
structural_annotation	UHGV-1408175_32	PF08281,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_33	phrog_8470	283.1	0	N/A	unknown function
UniRef90	UHGV-1408175_33	UniRef90_A0A1M7BII1	326.0	0	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-1408175_33	742740.HMPREF9474_03121	189.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1408175_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1408175_33	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-1408175_34	phrog_35860	41.6	0.000000000013	N/A	unknown function
Pfam	UHGV-1408175_34	PF14058	N/A	N/A	PcfK-like protein	PcfK
PHROG	UHGV-1408175_35	phrog_3930	83.3	2.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-1408175_35	536232.CLM_2546	105.0	3.82e-28	N/A	N/A
PHROG	UHGV-1408175_36	phrog_19920	106.5	9e-32	N/A	unknown function

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1408175	Yes	28,652	29	72	1