vOTU vOTU-167441

vOTU: vOTU-167441

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-167441
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00134 → vGENUS-00111 → vOTU-167441
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0051702
Biosample ID	N/A
Genome length (bp)	31,030 bps
CheckV completeness	88.20% (Medium-quality)
CDS count	40
CDS density	91.23%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	1328	Host agreement	85.77
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	25	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 88.2)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0051702_1	UniRef90_A0A374N9Y2	165.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0051702_1	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_2	phrog_1067	101.3	2.8e-30	minor head protein	head and packaging
UniRef90	UHGV-0051702_2	UniRef90_A0A1G5CPD2	153.0	5.3e-39	Phage minor structural protein, N-terminal region	N/A
Pfam	UHGV-0051702_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0051702_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0051702_2	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0051702_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_3	phrog_33	83.9	3.5e-24	distal tail protein Dit	tail
UniRef90	UHGV-0051702_3	UniRef90_A0A1G5CPA2	140.0	7.14e-37	Phage-related protein	N/A
eggNOG-mapper	UHGV-0051702_3	1160721.RBI_I01575	90.1	9.57e-19	Phage tail protein	N/A
COG	UHGV-0051702_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0051702_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0051702_4	K20283	74.3	3e-22	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0051702_4	phrog_1272	276.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0051702_4	UniRef90_A0A412ULX0	1727.0	0	PhageMin_Tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0051702_4	588581.Cpap_1264	253.0	0	Tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0051702_4	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0051702_4	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0051702_4	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0051702_5	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_6	phrog_88	67.5	2.1e-19	major tail protein	tail
UniRef90	UHGV-0051702_6	UniRef90_A0A1G5CNS8	150.0	4.1002e-42	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0051702_6	1235790.C805_00875	61.6	0.00000000581	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0051702_6	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0051702_6	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0051702_7	UniRef90_UPI000E5564A4	271.0	0	HK97 gp10 family phage protein	N/A
Pfam	UHGV-0051702_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0051702_7	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0051702_8	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_9	phrog_19734	72.5	5.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0051702_9	86416.Clopa_0343	62.8	0.0000000000401	N/A	N/A
NCBIFam	UHGV-0051702_9	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0051702_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_10	phrog_749	55.7	8.1e-16	N/A	unknown function
UniRef90	UHGV-0051702_10	UniRef90_A0A1G5CMX8	106.0	6.11e-28	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0051702_10	1211817.CCAT010000053_gene2133	58.2	0.00000000117	N/A	N/A
PHROG	UHGV-0051702_11	phrog_10	124.8	7.9e-37	major head protein	head and packaging
UniRef90	UHGV-0051702_11	UniRef90_A0A412ULW9	732.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0051702_11	1211817.CCAT010000053_gene2132	316.0	0	Phage capsid family	N/A
Pfam	UHGV-0051702_11	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0051702_11	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0051702_11	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0051702_11	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0051702_12	K01358	138.2	8.19998e-41	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0051702_12	phrog_94	206.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0051702_12	UniRef90_A0A412ULU1	465.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0051702_12	86416.Clopa_0340	180.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0051702_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0051702_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0051702_12	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_13	phrog_12	97.4	1.3e-28	portal protein	head and packaging
UniRef90	UHGV-0051702_13	UniRef90_A0A412ULV9	749.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0051702_13	1415774.U728_1254	259.0	0	Phage portal protein	N/A
Pfam	UHGV-0051702_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0051702_13	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0051702_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0051702_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_14	phrog_9	290.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0051702_14	UniRef90_A0A412UM03	1037.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0051702_14	86416.Clopa_0337	618.0	0	Phage Terminase	N/A
Pfam	UHGV-0051702_14	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0051702_14	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0051702_14	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0051702_14	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_15	phrog_5110	83.8	1.4e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0051702_15	UniRef90_A0A4U7JDP0	114.0	8.67e-31	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0051702_15	1211817.CCAT010000053_gene2128	100.0	4.45e-26	N/A	N/A
Pfam	UHGV-0051702_15	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0051702_15	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_16	phrog_119	69.1	6.7e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0051702_16	UniRef90_A0A412ULY9	221.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0051702_16	1158607.UAU_01026	99.8	8.3e-26	HNH endonuclease	N/A
Pfam	UHGV-0051702_16	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0051702_16	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0051702_17	394503.Ccel_3053	52.4	0.000000957	N/A	N/A
structural_annotation	UHGV-0051702_17	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_18	phrog_3584	148.8	3.64338e-44	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0051702_18	1235800.C819_00515	67.8	0.000000000123	N/A	N/A
structural_annotation	UHGV-0051702_18	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0051702_22	UniRef90_UPI000E4DC4DA	138.0	3.28e-39	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0051702_22	PF15597	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_23	phrog_2118	117.7	1.1e-34	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0051702_23	UniRef90_A0A374DVG7	238.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0051702_23	610130.Closa_0730	151.0	1.4013e-45	HNH endonuclease	N/A
Pfam	UHGV-0051702_23	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0051702_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0051702_23	TIGR02646,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_25	phrog_15609	100.6	1.7e-29	N/A	unknown function
UniRef90	UHGV-0051702_25	UniRef90_A0A373SLQ6	159.0	8.89825e-43	N/A	N/A
eggNOG-mapper	UHGV-0051702_25	641112.ACOK01000073_gene2872	123.0	1.92e-30	N/A	N/A
structural_annotation	UHGV-0051702_25	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_26	phrog_8470	210.6	0	N/A	unknown function
UniRef90	UHGV-0051702_26	UniRef90_UPI0018E45158	137.0	1.76e-31	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0051702_26	641112.ACOK01000073_gene2870	116.0	2.19e-25	PcfJ-like protein	N/A
Pfam	UHGV-0051702_26	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0051702_26	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_29	phrog_6058	42.4	0.0000000000077	N/A	unknown function
structural_annotation	UHGV-0051702_29	NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0051702_30	PF11614,TIGR02588,COG2847	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_32	phrog_585	114.4	7.2e-34	N/A	unknown function
UniRef90	UHGV-0051702_32	UniRef90_UPI00051C896C	145.0	2.30934e-42	N/A	N/A
eggNOG-mapper	UHGV-0051702_32	1033744.CAEL01000029_gene1306	131.0	2.89e-37	N/A	N/A
Pfam	UHGV-0051702_32	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0051702_32	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
UniRef90	UHGV-0051702_34	UniRef90_A0A374DVN3	161.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0051702_34	1219626.HMPREF1639_07045	47.8	0.00000322	N/A	N/A
UniRef90	UHGV-0051702_35	UniRef90_A0A373XLN2	156.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0051702_35	1408823.AXUS01000025_gene2653	58.9	0.00000000852	N/A	N/A
structural_annotation	UHGV-0051702_35	PF05339,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_36	phrog_1914	143.7	1.10002e-42	N/A	unknown function
UniRef90	UHGV-0051702_36	UniRef90_A0A374NDM7	328.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0051702_36	1160721.RBI_I01604	163.0	0	N/A	N/A
Pfam	UHGV-0051702_36	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0051702_36	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0051702_36	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_37	phrog_4980	116.0	3.4e-36	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0051702_37	UniRef90_UPI000E52DA24	337.0	0	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0051702_37	658086.HMPREF0994_06731	96.7	1.68e-19	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0051702_37	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0051702_37	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0051702_37	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-0051702_38	K14059	103.7	2.8e-30	int; integrase	N/A
PHROG	UHGV-0051702_38	phrog_1	121.9	7.2e-36	integrase	integration and excision
UniRef90	UHGV-0051702_38	UniRef90_A0A1G5CL52	799.0	0	Phage integrase family protein	N/A
eggNOG-mapper	UHGV-0051702_38	693746.OBV_41260	183.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0051702_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0051702_38	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0051702_38	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0051702_40	phrog_1762	74.5	1e-22	N/A	unknown function
UniRef90	UHGV-0051702_40	UniRef90_A0A373XPC7	549.0	0	N/A	N/A
eggNOG-mapper	UHGV-0051702_40	398512.JQKC01000004_gene5247	74.3	0.00000000000135	N/A	N/A
Pfam	UHGV-0051702_40	PF11185	N/A	N/A	N/A	DUF2971

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0051702	Yes	31,030	39	88	1