vOTU vOTU-167681

vOTU: vOTU-167681

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-167681
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-05801 → vOTU-167681
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp001916075
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0037725
Biosample ID	SAMEA4969165
Genome length (bp)	24,591 bps
CheckV completeness	65.85% (Medium-quality)
CDS count	38
CDS density	91.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp001916075	Total connections	26	Host agreement	76.92
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium → Clostridium sp900540255	Total connections	9	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 65.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0037725_1	phrog_1067	324.5	0	minor head protein	head and packaging
UniRef90	UHGV-0037725_1	UniRef90_UPI001C8BD600	809.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0037725_1	1280689.AUJC01000011_gene1532	353.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0037725_1	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0037725_1	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0037725_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0037725_1	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_2	phrog_33	92.9	5.8e-27	distal tail protein Dit	tail
UniRef90	UHGV-0037725_2	UniRef90_UPI001C8B5B0F	447.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0037725_2	195103.CPF_1575	185.0	0	tail component	N/A
Pfam	UHGV-0037725_2	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0037725_2	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0037725_2	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0037725_2	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_3	phrog_1272	411.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0037725_3	UniRef90_UPI001C8CC1D6	830.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0037725_3	1122146.AUHP01000010_gene1066	364.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-0037725_3	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0037725_3	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0037725_3	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0037725_3	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_4	phrog_187	60.4	3e-17	head-tail adaptor	connector
structural_annotation	UHGV-0037725_4	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_5	phrog_88	128.1	5.7e-38	major tail protein	tail
UniRef90	UHGV-0037725_5	UniRef90_UPI001159BB09	358.0	0	major tail protein	N/A
eggNOG-mapper	UHGV-0037725_5	411468.CLOSCI_01496	202.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0037725_5	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0037725_5	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037725_5	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_6	phrog_78	77.2	2.2e-22	tail terminator	connector
UniRef90	UHGV-0037725_6	UniRef90_Q8SBP4	97.4	6.24e-24	Gp10 protein	N/A
eggNOG-mapper	UHGV-0037725_6	931276.Cspa_c10200	95.5	5.99e-24	N/A	N/A
structural_annotation	UHGV-0037725_6	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_7	phrog_5	61.7	2e-17	tail completion or Neck1 protein	connector
UniRef90	UHGV-0037725_7	UniRef90_UPI001C8B911A	267.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0037725_7	649747.HMPREF0083_01006	55.5	0.0000000866	Phage protein, HK97 gp10 family	N/A
Pfam	UHGV-0037725_7	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0037725_7	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0037725_7	PF04883,TIGR01725	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037725_8	UniRef90_UPI001056B886	112.0	1.16e-29	phage head closure protein	N/A
eggNOG-mapper	UHGV-0037725_8	411459.RUMOBE_01731	80.9	3.73e-18	Phage head-tail adaptor	N/A
NCBIFam	UHGV-0037725_8	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0037725_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_9	phrog_749	85.5	3.9e-25	N/A	unknown function
UniRef90	UHGV-0037725_9	UniRef90_A0A3F3A0Q7	78.2	8.45e-17	Gp6 protein	N/A
eggNOG-mapper	UHGV-0037725_9	1211817.CCAT010000008_gene943	75.9	1.06e-16	N/A	N/A
PHROG	UHGV-0037725_10	phrog_10	160.2	0	major head protein	head and packaging
UniRef90	UHGV-0037725_10	UniRef90_A0A0F3FRY7	495.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0037725_10	1211817.CCAT010000008_gene942	471.0	0	Phage capsid family	N/A
Pfam	UHGV-0037725_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0037725_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0037725_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0037725_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0037725_11	K06904	165.1	0	N/A	N/A
PHROG	UHGV-0037725_11	phrog_80	171.3	0	head maturation protease	head and packaging
UniRef90	UHGV-0037725_11	UniRef90_A0A174QPT7	278.0	0	Prohead protease	N/A
eggNOG-mapper	UHGV-0037725_11	1211817.CCAT010000008_gene941	271.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0037725_11	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0037725_11	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0037725_11	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0037725_11	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_12	phrog_12	111.0	8.3e-33	portal protein	head and packaging
UniRef90	UHGV-0037725_12	UniRef90_A0A6I1MNZ3	403.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0037725_12	1211817.CCAT010000008_gene940	395.0	0	Phage portal protein	N/A
Pfam	UHGV-0037725_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0037725_12	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0037725_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0037725_12	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_13	phrog_9	318.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037725_13	UniRef90_A0A3F2ZWA0	771.0	0	Putative phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-0037725_13	1211817.CCAT010000008_gene939	779.0	0	Phage Terminase	N/A
Pfam	UHGV-0037725_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0037725_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0037725_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0037725_13	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_14	phrog_5110	108.9	2.6e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0037725_14	UniRef90_A0A1F1KWB1	177.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0037725_14	1211817.CCAT010000008_gene938	170.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0037725_14	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0037725_14	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037725_14	PF05119,PF06056,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0037725_15	K07451	44.0	0.0000000000041	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0037725_15	phrog_119	84.4	1.3e-24	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037725_15	UniRef90_A0A1M5U101	122.0	3.89e-34	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0037725_15	86416.Clopa_0335	112.0	6.83e-31	HNH nucleases	N/A
Pfam	UHGV-0037725_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0037725_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0037725_16	K04763	109.8	3.5e-32	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0037725_16	phrog_216	167.1	0	integrase	integration and excision
UniRef90	UHGV-0037725_16	UniRef90_A0A316MAM1	288.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0037725_16	642492.Clole_1851	224.0	0	integrase family	N/A
Pfam	UHGV-0037725_16	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0037725_16	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0037725_16	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_17	phrog_3928	42.0	0.000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0037725_17	1414720.CBYM010000040_gene1639	86.3	5.43e-22	N/A	N/A
UniRef90	UHGV-0037725_18	UniRef90_UPI0018A8EB18	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037725_18	1414720.CBYM010000040_gene1638	288.0	0	N/A	N/A
structural_annotation	UHGV-0037725_18	PF04545,MF_00683,NF008895	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0037725_20	536232.CLM_1636	162.0	0	N/A	N/A
structural_annotation	UHGV-0037725_20	PF17457	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_22	phrog_1672	98.4	5.7e-29	N/A	unknown function
UniRef90	UHGV-0037725_22	UniRef90_A0A3P6KCP8	130.0	1.67e-36	N/A	N/A
eggNOG-mapper	UHGV-0037725_22	632245.CLP_2710	125.0	1.91e-35	N/A	N/A
KOfam	UHGV-0037725_28	K02315	122.4	5e-36	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0037725_28	phrog_50	134.9	7.1e-40	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037725_28	UniRef90_UPI001A9BD14A	442.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0037725_28	1391647.AVSV01000022_gene2532	280.0	0	PFAM IstB-like ATP binding protein	N/A
Pfam	UHGV-0037725_28	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0037725_28	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0037725_28	PF01695,MF_01919,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_29	phrog_8489	258.8	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0037725_29	UniRef90_A0A2H4JF78	233.0	0	Putative DNA replication protein	N/A
eggNOG-mapper	UHGV-0037725_29	1415774.U728_1701	308.0	0	DnaD domain protein	N/A
COG	UHGV-0037725_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0037725_29	PF09681,TIGR01714	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037725_31	UniRef90_A0A174D8K3	61.6	0.0000000000102	Spo0E like sporulation regulatory protein	N/A
Pfam	UHGV-0037725_31	PF09388	N/A	N/A	Spo0E like sporulation regulatory protein	SpoOE-like
KOfam	UHGV-0037725_32	K07741	86.7	6.8e-25	antB; anti-repressor protein	N/A
PHROG	UHGV-0037725_32	phrog_130	180.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0037725_32	UniRef90_UPI0018A9A0C6	417.0	0	phage antirepressor	N/A
eggNOG-mapper	UHGV-0037725_32	1211817.CCAT010000007_gene1061	261.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0037725_32	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0037725_32	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0037725_32	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0037725_32	PF03374,PF02498,TIGR02681,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0037725_33	phrog_7199	55.9	5.1e-16	RNA polymerase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0037725_33	536233.CLO_0862	49.3	0.00000031	N/A	N/A
UniRef90	UHGV-0037725_35	UniRef90_UPI001F1D9245	132.0	7.13e-39	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0037725_35	748727.CLJU_c32490	92.0	1.15e-23	N/A	N/A
KOfam	UHGV-0037725_36	K22299	45.9	0.0000000000011	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0037725_36	UniRef90_UPI001F38CA98	370.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0037725_36	536233.CLO_0501	64.7	0.00000000126	Peptidase S24-like	N/A
Pfam	UHGV-0037725_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037725_36	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0037725_37	phrog_87	92.2	4.2e-27	metallo-protease	other
UniRef90	UHGV-0037725_37	UniRef90_UPI001F15A929	285.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0037725_37	1567012.A0A0A7RTF0_9VIRU	204.0	0	Pfam:Peptidase_M78	N/A
Pfam	UHGV-0037725_37	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0037725_37	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0037725_38	K06400	314.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0037725_38	phrog_95	365.6	0	integrase	integration and excision
UniRef90	UHGV-0037725_38	UniRef90_UPI001F1AA41D	956.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0037725_38	1391647.AVSV01000054_gene2735	575.0	0	resolvase	N/A
Pfam	UHGV-0037725_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0037725_38	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0037725_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0037725_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0037725_38	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0037725	Yes	24,591	29	66	1
UHGV-0038156	No	24,591	29	66	1