vOTU vOTU-169591

vOTU: vOTU-169591

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-169591
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01134 → vOTU-169591
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Megasphaeraceae → Megasphaera → Megasphaera sp000417505
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2069869
Biosample ID	N/A
Genome length (bp)	34,552 bps
CheckV completeness	80.51% (Medium-quality)
CDS count	40
CDS density	94.23%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Megasphaeraceae → Megasphaera → Megasphaera sp000417505	Total connections	46	Host agreement	78.26
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Veillonellales → Megasphaeraceae → Megasphaera → Megasphaera sp000417505	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.51)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2069869_2	phrog_373	119.1	3.3e-35	anti-repressor	transcription regulation
UniRef90	UHGV-2069869_2	UniRef90_A0A848EVM8	454.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2069869_2	1273103.NM10_01194	357.0	0	Phage regulatory protein	N/A
Pfam	UHGV-2069869_2	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-2069869_2	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-2069869_2	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-2069869_2	PF09669,PF03374,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_3	phrog_25045	202.8	0	N/A	unknown function
UniRef90	UHGV-2069869_3	UniRef90_A0A1M6P3V4	202.0	0	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_3	1111454.HMPREF1250_0025	206.0	0	LysM domain	N/A
COG	UHGV-2069869_3	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-2069869_3	PF01476,MF_02014,NF010723	N/A	N/A	N/A	N/A
KOfam	UHGV-2069869_4	K19171	42.6	0.0000000000063	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-2069869_4	phrog_1499	128.9	5.1e-38	N/A	unknown function
UniRef90	UHGV-2069869_4	UniRef90_A0A533SRG1	149.0	7.56701e-44	Chromosome segregation protein SMC (Fragment)	N/A
eggNOG-mapper	UHGV-2069869_4	1273103.NM10_06866	197.0	0	AAA domain	N/A
Pfam	UHGV-2069869_4	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2069869_4	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-2069869_5	phrog_1499	317.2	0	N/A	unknown function
UniRef90	UHGV-2069869_5	UniRef90_R7MWH4	563.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_5	1111454.HMPREF1250_0033	619.0	0	AAA domain	N/A
COG	UHGV-2069869_5	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-2069869_6	phrog_124	246.7	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2069869_6	UniRef90_U7UBL1	653.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-2069869_6	1111454.HMPREF1250_0032	653.0	0	AAA domain	N/A
Pfam	UHGV-2069869_6	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-2069869_6	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_7	phrog_2698	182.7	0	N/A	unknown function
UniRef90	UHGV-2069869_7	UniRef90_R7MYL5	327.0	0	N/A	N/A
eggNOG-mapper	UHGV-2069869_7	1273103.NM10_06856	291.0	0	N/A	N/A
Pfam	UHGV-2069869_7	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-2069869_7	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-2069869_8	K19789	331.3	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-2069869_8	phrog_16	251.5	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2069869_8	UniRef90_U7UMX0	1458.0	0	Type III restriction enzyme, res subunit	N/A
eggNOG-mapper	UHGV-2069869_8	1111454.HMPREF1250_0041	1458.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-2069869_8	mREase_IV_00005	124.6	9.1e-37	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-2069869_8	PF05203	N/A	N/A	Hom_end-associated Hint	Hom_end_hint
Pfam	UHGV-2069869_8	PF05204	N/A	N/A	Homing endonuclease	Hom_end
Pfam	UHGV-2069869_8	PF14528	N/A	N/A	LAGLIDADG-like domain	LAGLIDADG_3
Pfam	UHGV-2069869_8	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-2069869_8	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-2069869_8	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2069869_8	PF05203,PF02399,MF_00967,MF_01420,NF005852,TIGR04095,COG1061,COG1372	N/A	N/A	N/A	N/A
KOfam	UHGV-2069869_9	K07505	419.9	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-2069869_9	phrog_2597	1028.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2069869_9	UniRef90_R7MWH1	1326.0	0	PriCT_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_9	1273103.NM10_06846	1303.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-2069869_9	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-2069869_9	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-2069869_9	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-2069869_9	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-2069869_11	K01160	55.4	0.0000000000000017	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-2069869_11	phrog_140	107.4	1.2e-31	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2069869_11	UniRef90_S7J1P6	285.0	0	Phage associated protein	N/A
eggNOG-mapper	UHGV-2069869_11	1273103.NM10_06836	285.0	0	crossover junction endodeoxyribonuclease	N/A
Pfam	UHGV-2069869_11	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-2069869_11	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
eggNOG-mapper	UHGV-2069869_12	1273103.NM10_06831	333.0	0	N/A	N/A
AcrCatalog	UHGV-2069869_12	cluster_21515	318.0	0	NA	N/A
PHROG	UHGV-2069869_14	phrog_36	64.5	2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-2069869_14	UniRef90_A0A346B157	99.4	3.21e-23	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-2069869_14	1273103.NM10_01099	110.0	4.98e-28	N/A	N/A
structural_annotation	UHGV-2069869_14	PF08281,NF008895,COG1595	N/A	N/A	N/A	N/A
UniRef90	UHGV-2069869_15	UniRef90_UPI00189D970F	168.0	0	N/A	N/A
eggNOG-mapper	UHGV-2069869_15	240302.BN982_00196	111.0	1.44e-25	N/A	N/A
structural_annotation	UHGV-2069869_15	PF15931,MF_00194,NF001460,COG2974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2069869_16	PF15968	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_17	phrog_509	291.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-2069869_17	UniRef90_UPI000412FE02	293.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-2069869_17	1232428.CAVO010000021_gene808	291.0	0	DNA packaging	N/A
Pfam	UHGV-2069869_17	PF06056	N/A	N/A	Putative ATPase subunit of terminase (gpP-like)	Terminase_5
NCBIFam	UHGV-2069869_17	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-2069869_17	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2069869_17	NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-2069869_18	K06909	407.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2069869_18	phrog_5653	192.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-2069869_18	UniRef90_A0A2A2ILZ5	692.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2069869_18	1232428.CAVO010000021_gene807	669.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-2069869_18	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2069869_18	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2069869_18	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2069869_18	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2069869_18	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_19	phrog_64	275.2	0	portal protein	head and packaging
UniRef90	UHGV-2069869_19	UniRef90_R6H6U9	420.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-2069869_19	742740.HMPREF9474_02357	391.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-2069869_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-2069869_19	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_20	phrog_194	148.7	3.36312e-44	head scaffolding protein	head and packaging
UniRef90	UHGV-2069869_20	UniRef90_UPI001AEAD020	120.0	1.11e-30	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-2069869_20	1321779.HMPREF1984_01307	113.0	1.31e-28	Phage minor structural protein GP20	N/A
Pfam	UHGV-2069869_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-2069869_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_21	phrog_909	75.7	5.2e-22	major head protein	head and packaging
UniRef90	UHGV-2069869_21	UniRef90_A0A0A8JLJ9	85.1	2.74e-19	N/A	N/A
eggNOG-mapper	UHGV-2069869_21	1078085.HMPREF1210_01145	81.3	1.42e-18	N/A	N/A
structural_annotation	UHGV-2069869_21	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_22	phrog_29	183.7	0	major head protein	head and packaging
UniRef90	UHGV-2069869_22	UniRef90_UPI001D6AA5E6	365.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-2069869_22	1232443.BAIA02000078_gene29	319.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-2069869_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-2069869_22	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_23	phrog_2841	351.9	0	minor head protein	head and packaging
UniRef90	UHGV-2069869_23	UniRef90_UPI00195C1C3E	714.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2069869_23	1273103.NM10_01064	475.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-2069869_23	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-2069869_23	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2069869_23	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2069869_23	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2069869_26	1123250.KB908414_gene2106	77.0	2.69e-16	N/A	N/A
PHROG	UHGV-2069869_27	phrog_615	74.2	1.5e-21	head-tail adaptor	connector
UniRef90	UHGV-2069869_27	UniRef90_UPI001AE9DA04	63.9	0.0000000000847	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-2069869_27	1273103.NM10_01054	162.0	0	N/A	N/A
structural_annotation	UHGV-2069869_27	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_28	phrog_5	66.1	7.4e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-2069869_28	UniRef90_UPI0005EBC23C	141.0	5.26005e-41	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2069869_28	1273103.NM10_01049	171.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2069869_28	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2069869_28	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_29	phrog_525	98.1	7.9e-29	N/A	unknown function
UniRef90	UHGV-2069869_29	UniRef90_UPI0011A26FBC	53.1	0.00000573	N/A	N/A
eggNOG-mapper	UHGV-2069869_29	1273103.NM10_01044	186.0	0	N/A	N/A
Pfam	UHGV-2069869_29	PF20765	N/A	N/A	N/A	DUF6838
structural_annotation	UHGV-2069869_29	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_30	phrog_1480	465.8	0	tail sheath	tail
UniRef90	UHGV-2069869_30	UniRef90_A0A269TCE8	656.0	0	Phage tail sheath protein	N/A
eggNOG-mapper	UHGV-2069869_30	1273103.NM10_01039	657.0	0	Phage tail sheath C-terminal domain	N/A
Pfam	UHGV-2069869_30	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-2069869_30	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
structural_annotation	UHGV-2069869_30	PF10758,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_31	phrog_365	143.5	8.09951e-43	tail protein	tail
UniRef90	UHGV-2069869_31	UniRef90_A0A1M6P0P1	302.0	0	Phage tail tube protein	N/A
eggNOG-mapper	UHGV-2069869_31	1273103.NM10_01034	302.0	0	Phage tail tube protein	N/A
Pfam	UHGV-2069869_31	PF09393	N/A	N/A	Phage tail tube protein	DUF2001
structural_annotation	UHGV-2069869_31	PF09393,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_32	phrog_4976	113.3	1.5e-33	tail assembly chaperone	tail
UniRef90	UHGV-2069869_32	UniRef90_U7UIV5	143.0	5.33054e-42	Phage XkdN-like domain protein	N/A
eggNOG-mapper	UHGV-2069869_32	1273103.NM10_01029	211.0	0	Phage XkdN-like tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-2069869_32	PF08890	N/A	N/A	Phage XkdN-like tail assembly chaperone protein, TAC	Phage_TAC_5
structural_annotation	UHGV-2069869_32	PF08890	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_33	phrog_16692	472.2	0	N/A	unknown function
UniRef90	UHGV-2069869_33	UniRef90_S7HTC1	1161.0	0	Phage tail tape measure protein, TP901 family, core region domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_33	1273103.NM10_01024	1161.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-2069869_33	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-2069869_33	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-2069869_33	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2069869_33	PF10145,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_34	phrog_380	154.0	0	endolysin	lysis
UniRef90	UHGV-2069869_34	UniRef90_A0A0L0W6M8	112.0	8.68e-27	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_34	1273103.NM10_01019	425.0	0	LysM domain	N/A
COG	UHGV-2069869_34	COG1652	N/A	N/A	Cytoplasmic potassium-binding protein Kbp/XkdP/YgaU, contains LysM domain	N/A
structural_annotation	UHGV-2069869_34	PF19266,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_35	phrog_400	268.6	0	tail protein	tail
UniRef90	UHGV-2069869_35	UniRef90_A0A848EUW7	1165.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_35	1273103.NM10_01014	614.0	0	NLP P60 protein	N/A
Pfam	UHGV-2069869_35	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-2069869_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-2069869_35	PF14594,PF18013,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_36	phrog_579	65.6	6.8e-19	N/A	unknown function
UniRef90	UHGV-2069869_36	UniRef90_A0A413QUA5	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-2069869_36	1273103.NM10_01009	226.0	0	N/A	N/A
Pfam	UHGV-2069869_36	PF10844	N/A	N/A	N/A	DUF2577
structural_annotation	UHGV-2069869_36	PF10844	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_37	phrog_120	95.6	3.5e-28	baseplate protein	tail
UniRef90	UHGV-2069869_37	UniRef90_S7HT48	245.0	0	N/A	N/A
eggNOG-mapper	UHGV-2069869_37	1273103.NM10_01004	245.0	0	N/A	N/A
Pfam	UHGV-2069869_37	PF10934	N/A	N/A	N/A	DUF2634
structural_annotation	UHGV-2069869_37	PF10934,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_38	phrog_6	211.5	0	baseplate protein	tail
UniRef90	UHGV-2069869_38	UniRef90_A0A269TDL3	596.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-2069869_38	1273103.NM10_00999	422.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-2069869_38	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-2069869_38	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2069869_38	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_39	phrog_521	94.7	7.8e-28	tail protein	tail
UniRef90	UHGV-2069869_39	UniRef90_A0A848EVX3	233.0	0	N/A	N/A
eggNOG-mapper	UHGV-2069869_39	568816.Acin_1302	145.0	1.73e-40	N/A	N/A
Pfam	UHGV-2069869_39	PF10076	N/A	N/A	Bacteriophage Mu-like, Gp48	Phage_Mu_Gp48
COG	UHGV-2069869_39	COG3778	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2069869_39	PF10076,TIGR02242,COG3778	N/A	N/A	N/A	N/A
PHROG	UHGV-2069869_40	phrog_7037	126.9	2.2e-37	tail fiber protein	tail
UniRef90	UHGV-2069869_40	UniRef90_UPI000486D8B9	194.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-2069869_40	1449063.JMLS01000030_gene468	81.3	0.00000000000000659	Phage tail-collar fibre protein	N/A
COG	UHGV-2069869_40	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-2069869_40	PF12571,NF012201	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2069869	Yes	34,552	47	81	1