vOTU vOTU-169626

vOTU: vOTU-169626

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-169626
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01985 → vGENUS-06322 → vOTU-169626
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → DTU089 → DTU089 sp002440045
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0053563
Biosample ID	SAMEA1965149
Genome length (bp)	25,295 bps
CheckV completeness	80.59% (Medium-quality)
CDS count	32
CDS density	93.74%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → DTU089 → DTU089 sp002440045	Total connections	5	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 80.59)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0053563_3	phrog_9958	196.2	0	N/A	unknown function
UniRef90	UHGV-0053563_3	UniRef90_R6GLI1	284.0	0	N/A	N/A
eggNOG-mapper	UHGV-0053563_3	246199.CUS_4486	125.0	2.5e-31	N/A	N/A
Pfam	UHGV-0053563_3	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0053563_3	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_5	phrog_24518	206.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0053563_5	1519439.JPJG01000077_gene922	147.0	1.49995e-41	N/A	N/A
KOfam	UHGV-0053563_6	K08309	56.6	5.4e-16	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0053563_6	phrog_19349	244.7	0	N/A	unknown function
UniRef90	UHGV-0053563_6	UniRef90_UPI00164BCB1C	232.0	0	transglycosylase SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0053563_6	742740.HMPREF9474_02375	177.0	0	lytic transglycosylase activity	N/A
Pfam	UHGV-0053563_6	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0053563_6	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0053563_6	PF01464,MF_01616,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_7	phrog_3584	272.9	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053563_7	UniRef90_I2E8X7	187.0	0	Gp31	N/A
eggNOG-mapper	UHGV-0053563_7	1160721.RBI_I01590	241.0	0	N/A	N/A
structural_annotation	UHGV-0053563_7	PF21578,NF033538	N/A	N/A	N/A	N/A
Pfam	UHGV-0053563_8	PF09889	N/A	N/A	N/A	DUF2116
KOfam	UHGV-0053563_9	K01520	158.8	0	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0053563_9	phrog_135	137.4	7.20001e-41	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053563_9	UniRef90_UPI00164A78A3	241.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0053563_9	1282887.AUJG01000016_gene1113	155.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0053563_9	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0053563_9	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0053563_9	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0053563_9	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_11	phrog_36	43.8	0.0000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-0053563_11	UniRef90_UPI00164ADA1B	216.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0053563_11	768710.DesyoDRAFT_5229	57.8	0.0000000174	N/A	N/A
structural_annotation	UHGV-0053563_11	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0053563_12	K07451	44.2	0.0000000000035	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0053563_12	phrog_119	75.5	8e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053563_12	UniRef90_UPI00164BCC03	176.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0053563_12	1094508.Tsac_2429	119.0	1.58e-33	HNH nucleases	N/A
Pfam	UHGV-0053563_12	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0053563_12	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0053563_13	PF11305,MF_01360,NF010236	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_14	phrog_1066	105.8	2.7e-31	N/A	unknown function
UniRef90	UHGV-0053563_14	UniRef90_W0U724	103.0	5.27e-26	Phage terminase-like protein, small subunit	N/A
eggNOG-mapper	UHGV-0053563_14	1160721.RBI_I01586	103.0	8.84e-27	N/A	N/A
Pfam	UHGV-0053563_14	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
PHROG	UHGV-0053563_15	phrog_9	395.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0053563_15	UniRef90_R6GIJ2	1038.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0053563_15	1160721.RBI_I01585	862.0	0	large subunit	N/A
Pfam	UHGV-0053563_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0053563_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0053563_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0053563_15	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_16	phrog_12	153.2	1.4013e-45	portal protein	head and packaging
UniRef90	UHGV-0053563_16	UniRef90_UPI00164A28CE	694.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0053563_16	1160721.RBI_I01584	528.0	0	Phage portal protein	N/A
Pfam	UHGV-0053563_16	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0053563_16	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0053563_16	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0053563_17	K06904	93.1	4.5e-27	N/A	N/A
PHROG	UHGV-0053563_17	phrog_80	114.4	1.5e-33	head maturation protease	head and packaging
UniRef90	UHGV-0053563_17	UniRef90_R6GVH9	315.0	0	Phage prohead protease HK97 family	N/A
eggNOG-mapper	UHGV-0053563_17	1160721.RBI_I01583	159.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0053563_17	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0053563_17	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0053563_17	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_18	phrog_10	158.0	0	major head protein	head and packaging
UniRef90	UHGV-0053563_18	UniRef90_UPI00164A2915	577.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0053563_18	1297617.JPJD01000020_gene308	256.0	0	Phage capsid family	N/A
Pfam	UHGV-0053563_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0053563_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0053563_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0053563_18	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_19	phrog_5223	118.1	2.4e-35	neck protein	connector
UniRef90	UHGV-0053563_19	UniRef90_R6GII7	166.0	0	Putative phage DNA packaging-like protein	N/A
eggNOG-mapper	UHGV-0053563_19	1160721.RBI_I01581	122.0	5.21e-35	N/A	N/A
NCBIFam	UHGV-0053563_19	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0053563_19	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_20	phrog_1951	107.6	6.2e-32	head-tail adaptor	connector
UniRef90	UHGV-0053563_20	UniRef90_R6HH08	192.0	0	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0053563_20	1160721.RBI_I01580	138.0	2.32994e-41	head-tail adaptor	N/A
NCBIFam	UHGV-0053563_20	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0053563_20	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0053563_20	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_21	phrog_957	71.2	1.3e-20	head protein	head and packaging
structural_annotation	UHGV-0053563_21	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_22	phrog_885	122.9	2.4e-36	major tail protein	tail
UniRef90	UHGV-0053563_22	UniRef90_A0A7C6X6S5	164.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0053563_22	1160721.RBI_I01578	225.0	0	N/A	N/A
structural_annotation	UHGV-0053563_22	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_24	phrog_991	159.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0053563_24	UniRef90_R6GII4	306.0	0	Immunity-specific protein Beta241	N/A
eggNOG-mapper	UHGV-0053563_24	642492.Clole_0752	251.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0053563_24	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0053563_24	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0053563_25	phrog_33	102.4	6.9e-30	distal tail protein Dit	tail
UniRef90	UHGV-0053563_25	UniRef90_R6GVG8	370.0	0	Phage putative tail component N-domain protein	N/A
eggNOG-mapper	UHGV-0053563_25	1160721.RBI_I01575	278.0	0	Phage tail protein	N/A
Pfam	UHGV-0053563_25	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0053563_25	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0053563_25	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_26	phrog_1067	440.5	0	minor head protein	head and packaging
UniRef90	UHGV-0053563_26	UniRef90_R6GLF8	1198.0	0	Phage minor structural protein region	N/A
eggNOG-mapper	UHGV-0053563_26	1160721.RBI_I01574	598.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0053563_26	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0053563_26	PF04862	N/A	N/A	N/A	DUF642
NCBIFam	UHGV-0053563_26	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0053563_26	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0053563_26	PF14594,PF04862,TIGR01665,NF033675,COG4926,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_27	phrog_372	281.2	0	tail protein	tail
UniRef90	UHGV-0053563_27	UniRef90_A0A1Y4NAZ0	511.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0053563_27	1445810.A0A0A0PIV5_9CAUD	59.3	0.00000357	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-0053563_27	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0053563_27	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_28	phrog_19280	374.6	0	N/A	unknown function
UniRef90	UHGV-0053563_28	UniRef90_UPI00164B6084	542.0	0	N/A	N/A
eggNOG-mapper	UHGV-0053563_28	1160721.RBI_I01572	125.0	4.82e-30	N/A	N/A
Pfam	UHGV-0053563_28	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
Pfam	UHGV-0053563_28	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0053563_28	PF19789,PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_29	phrog_3206	76.6	2.6e-22	Avd protein of DGR	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053563_29	UniRef90_A0A4S2HBV4	78.6	6.83e-16	Four helix bundle protein	N/A
eggNOG-mapper	UHGV-0053563_29	1235797.C816_02835	57.8	0.0000000127	N/A	N/A
structural_annotation	UHGV-0053563_29	PF05635,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-0053563_30	K00986	110.2	2.3e-32	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0053563_30	phrog_1423	243.4	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0053563_30	UniRef90_R6GLF4	585.0	0	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0053563_30	1160721.RBI_I01568	297.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0053563_30	icity0040	91.2	1.6e-26	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0053563_30	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0053563_30	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0053563_30	PF00078,MF_01390,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0053563_31	phrog_4912	62.3	1e-17	tail fiber assembly	tail
UniRef90	UHGV-0053563_31	UniRef90_UPI00164B563B	130.0	1.64e-36	phage tail assembly chaperone	N/A
Pfam	UHGV-0053563_31	PF16778	N/A	N/A	Phage tail assembly chaperone protein	Phage_tail_APC
structural_annotation	UHGV-0053563_31	PF16778	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0053563	Yes	25,295	51	81	1