vOTU vOTU-169862

vOTU: vOTU-169862

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-169862
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00226 → vGENUS-00138 → vOTU-169862
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1511762
Biosample ID	N/A
Genome length (bp)	25,886 bps
CheckV completeness	55.60% (Medium-quality)
CDS count	32
CDS density	91.02%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	360	Host agreement	79.72
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A → Phascolarctobacterium_A succinatutens	Total connections	48	Host agreement	79.17

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1511762_1	UniRef90_A0A8F0WD75	90.9	6.09e-20	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1511762_1	1378168.N510_03079	58.9	0.0000000279	N/A	N/A
structural_annotation	UHGV-1511762_2	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_3	phrog_16490	82.9	1e-24	N/A	unknown function
eggNOG-mapper	UHGV-1511762_3	445972.ANACOL_01880	81.3	0.00000000000000125	N/A	N/A
eggNOG-mapper	UHGV-1511762_4	476272.RUMHYD_01953	49.7	0.00000062	N/A	N/A
PHROG	UHGV-1511762_5	phrog_21718	45.4	0.0000000000013	N/A	unknown function
UniRef90	UHGV-1511762_6	UniRef90_A0A316S6W0	97.4	5.92e-25	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-1511762_6	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-1511762_6	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-1511762_6	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_9	phrog_9467	56.0	6.4e-16	N/A	unknown function
UniRef90	UHGV-1511762_9	UniRef90_UPI0018C475E7	54.7	0.000000114	N/A	N/A
eggNOG-mapper	UHGV-1511762_9	1415774.U728_724	63.2	0.0000000000207	Phage protein (N4 Gp49/phage Sf6 gene 66) family	N/A
dbAPIS	UHGV-1511762_9	APIS070	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1511762_10	1392502.JNIO01000008_gene1280	226.0	0	N/A	N/A
structural_annotation	UHGV-1511762_10	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_11	phrog_918	101.7	3.4e-30	N/A	unknown function
UniRef90	UHGV-1511762_11	UniRef90_UPI000EC62F11	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-1511762_11	537007.BLAHAN_05515	142.0	3.82554e-43	N/A	N/A
Pfam	UHGV-1511762_11	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1511762_11	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_13	phrog_4105	81.1	9.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1511762_13	33035.JPJF01000043_gene996	75.1	7.98e-16	N/A	N/A
PHROG	UHGV-1511762_14	phrog_2837	61.4	1.4e-17	tail protein	tail
UniRef90	UHGV-1511762_14	UniRef90_A0A1Q6R2G9	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-1511762_14	520709.F985_01945	55.1	0.000000438	N/A	N/A
Pfam	UHGV-1511762_14	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-1511762_14	PF14301	N/A	N/A	N/A	N/A
KOfam	UHGV-1511762_16	K19721	67.7	5.1e-20	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-1511762_16	phrog_8745	60.9	5.4e-18	tail fiber protein	tail
eggNOG-mapper	UHGV-1511762_16	1123288.SOV_1c10770	82.8	0.000000000000174	Right handed beta helix region	N/A
Pfam	UHGV-1511762_16	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1511762_16	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-1511762_16	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_18	phrog_9880	523.4	0	N/A	unknown function
UniRef90	UHGV-1511762_18	UniRef90_A0A1Q6RQR6	4513.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1511762_18	1123288.SOV_1c10750	189.0	7.00649e-45	N/A	N/A
Pfam	UHGV-1511762_18	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
UniRef90	UHGV-1511762_19	UniRef90_A0A1Q6RQM5	832.0	0	SLT domain-containing protein	N/A
COG	UHGV-1511762_19	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-1511762_19	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_20	phrog_418	131.1	2.3e-39	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1511762_20	568816.Acin_1826	103.0	1.5e-24	N/A	N/A
structural_annotation	UHGV-1511762_20	PF16789,TIGR02971,COG3524	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_21	phrog_308	93.1	2.3e-27	internal virion protein	head and packaging
PHROG	UHGV-1511762_22	phrog_4880	140.3	1.40004e-41	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511762_22	UniRef90_R6WTP4	293.0	0	N-terminal phage replisome organizer	N/A
eggNOG-mapper	UHGV-1511762_22	1052684.PPM_2791	129.0	1.89e-32	sequence-specific DNA binding	N/A
Pfam	UHGV-1511762_22	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-1511762_22	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-1511762_22	COG1522	N/A	N/A	DNA-binding transcriptional regulator, Lrp family	N/A
structural_annotation	UHGV-1511762_22	PF09681,TIGR01714,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-1511762_23	K07455	202.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1511762_23	phrog_148	210.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511762_23	UniRef90_R6XVK6	358.0	0	Putative phage RecT family protein	N/A
eggNOG-mapper	UHGV-1511762_23	218284.CCDN010000001_gene901	205.0	0	RecT family	N/A
Pfam	UHGV-1511762_23	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1511762_23	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1511762_23	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1511762_23	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
UniRef90	UHGV-1511762_24	UniRef90_R6WLK2	126.0	2.38e-36	Conserved domain protein	N/A
eggNOG-mapper	UHGV-1511762_24	429009.Adeg_0117	50.4	0.00000102	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1511762_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1511762_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1511762_24	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_25	phrog_434	327.6	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1511762_25	UniRef90_R6WGP6	597.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-1511762_25	706434.HMPREF9429_00770	360.0	0	YqaJ viral recombinase family protein	N/A
Pfam	UHGV-1511762_25	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1511762_25	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1511762_25	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1511762_25	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_27	phrog_14367	53.6	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-1511762_27	UniRef90_R6WTN1	174.0	0	Peptidoglycan-binding LysM	N/A
eggNOG-mapper	UHGV-1511762_27	397291.C804_02419	49.3	0.00000615	LysM domain	N/A
Pfam	UHGV-1511762_27	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1511762_27	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-1511762_27	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1511762_28	NF041909	N/A	N/A	N/A	N/A
PHROG	UHGV-1511762_29	phrog_6058	77.4	1.1e-22	N/A	unknown function
UniRef90	UHGV-1511762_29	UniRef90_A0A0U9H7T0	60.1	0.000000000198	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-1511762_29	1280689.AUJC01000011_gene1497	68.9	0.0000000000000119	N/A	N/A
structural_annotation	UHGV-1511762_29	PF12728,TIGR01764	N/A	N/A	N/A	N/A
KOfam	UHGV-1511762_32	K18830	49.3	0.00000000000012	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
UniRef90	UHGV-1511762_32	UniRef90_R6X1Y8	179.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-1511762_32	641107.CDLVIII_1309	92.0	2.03e-22	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1511762_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1511762_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1511762_32	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1511762	Yes	25,886	44	56	1