vOTU vOTU-169864

vOTU: vOTU-169864

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-169864
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-01619 → vGENUS-01685 → vOTU-169864
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0148073
Biosample ID	N/A
Genome length (bp)	37,138 bps
CheckV completeness	82.11% (Medium-quality)
CDS count	59
CDS density	91.39%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum	Total connections	26	Host agreement	96.15
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q fessum	Total connections	54	Host agreement	92.59

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 82.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0148073_1	K14059	172.8	0	int; integrase	N/A
PHROG	UHGV-0148073_1	phrog_1	156.5	0	integrase	integration and excision
UniRef90	UHGV-0148073_1	UniRef90_A0A3R6MTQ4	700.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0148073_1	608534.GCWU000341_02323	303.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0148073_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0148073_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0148073_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0148073_1	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_3	phrog_10226	231.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0148073_3	1121091.AUMP01000069_gene1397	188.0	0	Restriction endonuclease	N/A
COG	UHGV-0148073_3	COG1715	N/A	N/A	Restriction endonuclease Mrr	N/A
structural_annotation	UHGV-0148073_3	COG4127	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_4	phrog_87	86.6	2.1e-25	metallo-protease	other
UniRef90	UHGV-0148073_4	UniRef90_A0A396LGB6	206.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0148073_4	1235792.C808_05259	164.0	0	Zn peptidase	N/A
Pfam	UHGV-0148073_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0148073_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0148073_4	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_5	phrog_11900	228.2	0	N/A	unknown function
UniRef90	UHGV-0148073_5	UniRef90_A0A415ZY48	496.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-0148073_5	1256908.HMPREF0373_00218	380.0	0	Fic/DOC family	N/A
Pfam	UHGV-0148073_5	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-0148073_5	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-0148073_5	PF02661,TIGR02613,COG3177	N/A	N/A	N/A	N/A
KOfam	UHGV-0148073_6	K22299	71.7	1.5e-20	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0148073_6	phrog_8	68.9	1.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0148073_6	UniRef90_A0A3R6U3W2	168.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0148073_6	1256908.HMPREF0373_00219	84.7	5.42e-20	sequence-specific DNA binding	N/A
PADLOC	UHGV-0148073_6	retron_type_VI_hth_cluster2_1	47.5	0.00000000000047	N/A	Retron
Pfam	UHGV-0148073_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0148073_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0148073_6	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0148073_7	UniRef90_A0A417ACE5	107.0	3.49e-29	HTH cro/C1-type domain-containing protein	N/A
structural_annotation	UHGV-0148073_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_8	phrog_14088	71.0	9e-21	N/A	unknown function
UniRef90	UHGV-0148073_8	UniRef90_A0A3R6M7R7	67.0	0.000000000000247	Carboxypeptidase	N/A
eggNOG-mapper	UHGV-0148073_8	1235802.C823_04730	65.9	0.000000000000122	N/A	N/A
PHROG	UHGV-0148073_9	phrog_1305	150.8	7.00649e-45	DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148073_9	UniRef90_A0A415ZXZ0	486.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148073_9	445974.CLORAM_02962	221.0	0	N/A	N/A
structural_annotation	UHGV-0148073_9	COG2250	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148073_11	883156.HMPREF9282_01215	58.5	0.0000000284	N/A	N/A
KOfam	UHGV-0148073_12	K22300	42.1	0.000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0148073_12	UniRef90_A0A3R6P7I8	332.0	0	XRE family transcriptional regulator	N/A
Pfam	UHGV-0148073_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0148073_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0148073_12	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148073_18	1304866.K413DRAFT_3014	55.8	0.0000000006	N/A	N/A
PHROG	UHGV-0148073_19	phrog_659	44.0	0.0000000000023	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148073_19	UniRef90_A0A416L738	426.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148073_19	33035.JPJF01000135_gene5082	262.0	0	N/A	N/A
Pfam	UHGV-0148073_19	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0148073_19	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_20	phrog_72	66.8	2.6e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0148073_20	411468.CLOSCI_00314	135.0	1.69e-37	N/A	N/A
structural_annotation	UHGV-0148073_20	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_21	phrog_7566	88.2	6.5e-26	N/A	unknown function
UniRef90	UHGV-0148073_21	UniRef90_A0A3R6NLE0	187.0	0	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0148073_21	1304866.K413DRAFT_1198	74.3	3.96e-16	N/A	N/A
PHROG	UHGV-0148073_22	phrog_2113	51.7	0.000000000000012	N/A	unknown function
structural_annotation	UHGV-0148073_22	PF01978,TIGR01610,COG3388	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_23	phrog_244	66.2	6.7e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0148073_23	742740.HMPREF9474_03491	142.0	4.49957e-42	N/A	N/A
structural_annotation	UHGV-0148073_23	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_24	phrog_15768	156.8	0	N/A	unknown function
UniRef90	UHGV-0148073_24	UniRef90_A0A316T437	454.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148073_24	748224.HMPREF9436_03357	95.9	4.74e-21	N/A	N/A
AcrCatalog	UHGV-0148073_24	cluster_38323	119.0	6.29e-35	NA	N/A
Pfam	UHGV-0148073_24	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0148073_24	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0148073_25	PF02295,PF18697,MF_01177,NF033788,COG0640	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148073_26	411459.RUMOBE_01385	64.3	0.00000000000439	N/A	N/A
AcrCatalog	UHGV-0148073_26	cluster_11670	62.8	7.08e-16	NA	N/A
KOfam	UHGV-0148073_28	K22299	50.8	0.000000000000042	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0148073_28	phrog_8	59.8	6.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0148073_28	UniRef90_UPI0013E92A23	65.9	0.0000000000687	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0148073_28	526218.Sterm_1389	65.9	0.0000000000128	sequence-specific DNA binding	N/A
Pfam	UHGV-0148073_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0148073_28	COG1426	N/A	N/A	N/A	N/A
UniRef90	UHGV-0148073_29	UniRef90_A0A7X5DAV1	47.8	0.00000331	Toxin-antitoxin system HicB family antitoxin	N/A
Pfam	UHGV-0148073_29	PF05534	N/A	N/A	HicB family	HicB
structural_annotation	UHGV-0148073_29	PF07878,NF010256,COG4691	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_30	phrog_2011	152.0	4.2039e-45	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0148073_30	UniRef90_A0A396Q4H5	494.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0148073_30	1151292.QEW_2476	180.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0148073_30	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0148073_30	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0148073_30	PF02498,COG3617	N/A	N/A	N/A	N/A
KOfam	UHGV-0148073_32	K03496	127.4	1.7e-37	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0148073_32	phrog_164	133.0	2.5e-39	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148073_32	UniRef90_A0A417WCT9	597.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0148073_32	879212.DespoDRAFT_03562	384.0	0	AAA domain	N/A
Pfam	UHGV-0148073_32	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0148073_32	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0148073_32	PF01656,MF_00355,NF041283,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_33	phrog_33130	106.0	1.4e-31	N/A	unknown function
UniRef90	UHGV-0148073_33	UniRef90_A0A3B9CD52	75.9	3.17e-16	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0148073_33	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0148073_34	K06909	416.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0148073_34	phrog_3717	155.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0148073_34	UniRef90_A0A417JCV1	1088.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0148073_34	33035.JPJF01000106_gene3136	778.0	0	Terminase small subunit	N/A
Pfam	UHGV-0148073_34	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0148073_34	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0148073_34	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0148073_34	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0148073_34	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0148073_34	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_35	phrog_533	281.3	0	portal protein	head and packaging
UniRef90	UHGV-0148073_35	UniRef90_A0A1C6CDM8	746.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0148073_35	33035.JPJF01000106_gene3135	523.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0148073_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_36	phrog_581	248.4	0	minor head protein	head and packaging
UniRef90	UHGV-0148073_36	UniRef90_A0A416DA39	754.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0148073_36	33035.JPJF01000106_gene3134	416.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0148073_36	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0148073_36	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0148073_36	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0148073_37	UniRef90_A0A3R6JN99	136.0	7.42996e-41	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-0148073_37	608534.GCWU000341_00501	68.2	0.0000000000000124	Cysteine-rich KTR	N/A
Pfam	UHGV-0148073_37	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0148073_37	PF14205,NF041070	N/A	N/A	N/A	N/A
UniRef90	UHGV-0148073_38	UniRef90_UPI001C0EBA51	249.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0148073_38	742765.HMPREF9457_02126	86.7	2.16e-18	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0148073_38	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0148073_39	phrog_247	276.7	0	major head protein	head and packaging
UniRef90	UHGV-0148073_39	UniRef90_A0A3R6K7E9	780.0	0	Phage coat protein	N/A
eggNOG-mapper	UHGV-0148073_39	536233.CLO_0886	411.0	0	N/A	N/A
COG	UHGV-0148073_39	COG1106	N/A	N/A	ATPase/GTPase, AAA15 family	N/A
structural_annotation	UHGV-0148073_39	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_40	phrog_541	90.0	8e-27	head-tail adaptor	connector
eggNOG-mapper	UHGV-0148073_40	476272.RUMHYD_01778	118.0	1.42e-31	N/A	N/A
PHROG	UHGV-0148073_42	phrog_355	48.4	0.00000000000017	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0148073_42	UniRef90_A0A415G5B2	170.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148073_42	397290.C810_05229	173.0	0	N/A	N/A
structural_annotation	UHGV-0148073_42	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_43	phrog_9479	170.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0148073_43	1514668.JOOA01000002_gene2680	58.5	0.00000000358	N/A	N/A
structural_annotation	UHGV-0148073_43	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_45	phrog_8680	238.2	0	N/A	unknown function
UniRef90	UHGV-0148073_45	UniRef90_A0A3R6MNB4	463.0	0	N/A	N/A
eggNOG-mapper	UHGV-0148073_45	411470.RUMGNA_02208	286.0	0	N/A	N/A
Pfam	UHGV-0148073_45	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0148073_45	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_46	phrog_3366	96.3	3.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0148073_46	476272.RUMHYD_01779	144.0	4.74059e-42	N/A	N/A
structural_annotation	UHGV-0148073_46	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_47	phrog_556	66.2	6e-20	minor head protein	head and packaging
UniRef90	UHGV-0148073_47	UniRef90_UPI0008B4CFF0	200.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0148073_47	476272.RUMHYD_01780	146.0	1.14066e-42	N/A	N/A
Pfam	UHGV-0148073_47	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0148073_47	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_48	phrog_3266	87.8	1e-25	tail completion	connector
eggNOG-mapper	UHGV-0148073_48	476272.RUMHYD_01781	141.0	1.55e-40	N/A	N/A
structural_annotation	UHGV-0148073_48	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_49	phrog_3099	116.0	3.1e-34	N/A	unknown function
eggNOG-mapper	UHGV-0148073_49	476272.RUMHYD_01782	142.0	9.21003e-41	N/A	N/A
structural_annotation	UHGV-0148073_49	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_50	phrog_11299	113.4	1.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0148073_50	411459.RUMOBE_01382	117.0	6.53e-32	N/A	N/A
structural_annotation	UHGV-0148073_50	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_51	phrog_706	142.1	3.30006e-42	N/A	unknown function
UniRef90	UHGV-0148073_51	UniRef90_UPI00189B451E	194.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0148073_51	411902.CLOBOL_00127	178.0	0	N/A	N/A
Pfam	UHGV-0148073_51	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0148073_51	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_52	phrog_37543	713.6	0	N/A	unknown function
UniRef90	UHGV-0148073_52	UniRef90_UPI001DBC5439	313.0	0	PspA/IM30 family protein	N/A
eggNOG-mapper	UHGV-0148073_52	1432847.V5USK5_9VIRU	188.0	1.4013e-45	N-acetylmuramoyl-L-alanine amidase activity	N/A
structural_annotation	UHGV-0148073_52	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_53	phrog_1194	58.3	1.3e-16	N/A	unknown function
eggNOG-mapper	UHGV-0148073_53	1232449.BAHV02000010_gene2724	108.0	1.34e-28	N/A	N/A
structural_annotation	UHGV-0148073_53	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_54	phrog_32744	154.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0148073_54	411902.CLOBOL_00124	459.0	0	N/A	N/A
structural_annotation	UHGV-0148073_54	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0148073_55	phrog_18725	63.7	3.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0148073_55	411902.CLOBOL_00123	125.0	6.19e-35	N/A	N/A
eggNOG-mapper	UHGV-0148073_56	585501.HMPREF6123_0821	109.0	3.07e-28	N/A	N/A
COG	UHGV-0148073_57	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0148073_58	1298920.KI911353_gene541	59.3	0.000000126	ATPase involved in DNA repair	N/A
COG	UHGV-0148073_58	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0148073_58	PF07675,NF038128	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0148073_59	610130.Closa_0759	57.0	0.00000105	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0148073	Yes	37,138	45	82	1