vOTU vOTU-170212

vOTU: vOTU-170212

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-170212
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00022 → vSUBFAM-01985 → vOTU-170212
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faeciplasma → Faeciplasma sp900553675
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0014969
Biosample ID	SAMN20031487
Genome length (bp)	27,245 bps
CheckV completeness	85.60% (Medium-quality)
CDS count	35
CDS density	95.17%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faeciplasma → Faeciplasma sp900553675	Total connections	5	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 85.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0014969_1	phrog_7445	40.8	0.000000000031	N/A	unknown function
UniRef90	UHGV-0014969_1	UniRef90_UPI001C0B1566	53.1	0.00000189	PcfK-like family protein	N/A
eggNOG-mapper	UHGV-0014969_1	1123288.SOV_1c10500	63.2	0.0000000000421	N/A	N/A
Pfam	UHGV-0014969_1	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0014969_1	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_2	phrog_8470	273.1	0	N/A	unknown function
UniRef90	UHGV-0014969_2	UniRef90_UPI001875A728	405.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0014969_2	1157490.EL26_01845	177.0	1.4013e-45	PcfJ-like protein	N/A
Pfam	UHGV-0014969_2	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0014969_2	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_3	phrog_15609	228.9	0	N/A	unknown function
UniRef90	UHGV-0014969_3	UniRef90_UPI001246A313	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0014969_3	1226322.HMPREF1545_00098	178.0	0	N/A	N/A
Pfam	UHGV-0014969_3	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0014969_3	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0014969_3	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_5	phrog_3584	263.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0014969_5	UniRef90_I2E8X7	182.0	0	Gp31	N/A
eggNOG-mapper	UHGV-0014969_5	1160721.RBI_I01590	229.0	0	N/A	N/A
structural_annotation	UHGV-0014969_5	PF21578,NF033538	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_6	phrog_3584	78.6	8.7e-23	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0014969_6	1514668.JOOA01000001_gene223	77.0	0.00000000000000643	N/A	N/A
UniRef90	UHGV-0014969_8	UniRef90_UPI00164ADA1B	130.0	4.42e-36	sigma-70 family RNA polymerase sigma factor	N/A
structural_annotation	UHGV-0014969_8	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0014969_9	K07451	49.5	0.000000000000083	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0014969_9	phrog_119	71.6	1.1e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0014969_9	UniRef90_UPI00164BCC03	153.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0014969_9	1094508.Tsac_2429	111.0	4.21e-30	HNH nucleases	N/A
Pfam	UHGV-0014969_9	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0014969_9	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0014969_10	PF11305,MF_01360,NF010236	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_11	phrog_1066	105.2	4e-31	N/A	unknown function
UniRef90	UHGV-0014969_11	UniRef90_W0U724	127.0	1.45e-35	Phage terminase-like protein, small subunit	N/A
eggNOG-mapper	UHGV-0014969_11	1160721.RBI_I01586	127.0	2.43e-36	N/A	N/A
PHROG	UHGV-0014969_12	phrog_9	405.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0014969_12	UniRef90_R6GIJ2	955.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0014969_12	1160721.RBI_I01585	829.0	0	large subunit	N/A
Pfam	UHGV-0014969_12	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0014969_12	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0014969_12	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0014969_12	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_13	phrog_12	159.3	0	portal protein	head and packaging
UniRef90	UHGV-0014969_13	UniRef90_W0U6Y2	570.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0014969_13	1160721.RBI_I01584	570.0	0	Phage portal protein	N/A
Pfam	UHGV-0014969_13	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0014969_13	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0014969_13	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0014969_14	K06904	98.0	1.3e-28	N/A	N/A
PHROG	UHGV-0014969_14	phrog_80	114.9	9.4e-34	head maturation protease	head and packaging
UniRef90	UHGV-0014969_14	UniRef90_R6GVH9	302.0	0	Phage prohead protease HK97 family	N/A
eggNOG-mapper	UHGV-0014969_14	1160721.RBI_I01583	165.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0014969_14	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0014969_14	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0014969_14	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_15	phrog_10	171.7	0	major head protein	head and packaging
UniRef90	UHGV-0014969_15	UniRef90_R6GU80	513.0	0	Phage major capsid protein family	N/A
eggNOG-mapper	UHGV-0014969_15	1203606.HMPREF1526_01339	313.0	0	Phage capsid family	N/A
Pfam	UHGV-0014969_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0014969_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0014969_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0014969_15	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_16	phrog_5223	113.2	7.8e-34	neck protein	connector
UniRef90	UHGV-0014969_16	UniRef90_UPI00164CC5D8	125.0	1.31e-35	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0014969_16	324057.Pjdr2_1545	94.4	6.56e-24	N/A	N/A
NCBIFam	UHGV-0014969_16	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0014969_16	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_17	phrog_1951	102.8	1.8e-30	head-tail adaptor	connector
UniRef90	UHGV-0014969_17	UniRef90_R6HH08	186.0	0	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0014969_17	1160721.RBI_I01580	145.0	2.94273e-44	head-tail adaptor	N/A
NCBIFam	UHGV-0014969_17	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0014969_17	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0014969_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_18	phrog_957	56.7	3.3e-16	head protein	head and packaging
structural_annotation	UHGV-0014969_18	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_19	phrog_885	99.5	3e-29	major tail protein	tail
UniRef90	UHGV-0014969_19	UniRef90_A0A7C6X6S5	133.0	1.81e-34	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0014969_19	1160721.RBI_I01578	201.0	0	N/A	N/A
PHROG	UHGV-0014969_22	phrog_8462	146.8	2.66247e-44	tail length tape measure protein	tail
UniRef90	UHGV-0014969_22	UniRef90_R6GII4	484.0	0	Immunity-specific protein Beta241	N/A
eggNOG-mapper	UHGV-0014969_22	1160721.RBI_I01576	359.0	0	tail tape measure protein, TP901	N/A
COG	UHGV-0014969_22	COG5283	N/A	N/A	Phage-related tail protein	N/A
PHROG	UHGV-0014969_23	phrog_33	99.5	5.9e-29	distal tail protein Dit	tail
UniRef90	UHGV-0014969_23	UniRef90_R6GVG8	320.0	0	Phage putative tail component N-domain protein	N/A
eggNOG-mapper	UHGV-0014969_23	1160721.RBI_I01575	256.0	0	Phage tail protein	N/A
Pfam	UHGV-0014969_23	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0014969_23	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0014969_23	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_24	phrog_1067	303.4	0	minor head protein	head and packaging
eggNOG-mapper	UHGV-0014969_24	1160721.RBI_I01574	379.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0014969_24	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0014969_24	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0014969_24	COG4926	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-0014969_25	195103.CPF_0968	51.6	0.00000136	N/A	N/A
structural_annotation	UHGV-0014969_25	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_26	phrog_19280	201.3	0	N/A	unknown function
UniRef90	UHGV-0014969_26	UniRef90_A0A356CXZ6	122.0	1.3e-30	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0014969_26	1160721.RBI_I01572	122.0	3.41e-31	N/A	N/A
Pfam	UHGV-0014969_26	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0014969_27	phrog_17147	440.8	0	N/A	unknown function
UniRef90	UHGV-0014969_27	UniRef90_A0A374JQW7	124.0	3.11e-26	N/A	N/A
eggNOG-mapper	UHGV-0014969_27	1273103.NM10_03056	332.0	0	N/A	N/A
KOfam	UHGV-0014969_28	K00986	43.6	0.0000000000031	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0014969_28	phrog_1423	110.9	1.2e-32	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0014969_28	UniRef90_UPI0013EC2EB0	374.0	0	reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0014969_28	1273103.NM10_03051	253.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
Pfam	UHGV-0014969_28	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0014969_28	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0014969_28	PF00078,MF_04065,TIGR04416,COG3344	N/A	N/A	N/A	N/A
PHROG	UHGV-0014969_31	phrog_199	88.0	9.2e-26	holin	lysis
UniRef90	UHGV-0014969_31	UniRef90_A0A845R9S9	204.0	0	Holin	N/A
eggNOG-mapper	UHGV-0014969_31	887325.HMPREF0381_0407	191.0	0	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0014969_31	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0014969_31	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0014969_31	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0014969_31	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0014969_32	K07273	179.2	0	acm; lysozyme	N/A
PHROG	UHGV-0014969_32	phrog_291	155.4	0	endolysin	lysis
UniRef90	UHGV-0014969_32	UniRef90_A0A7X8C3J7	158.0	9.3887e-44	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0014969_32	537013.CLOSTMETH_02711	146.0	8.27e-40	hydrolase, family 25	N/A
Pfam	UHGV-0014969_32	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0014969_32	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
UniRef90	UHGV-0014969_34	UniRef90_A0A7X2P872	118.0	1.69e-31	Ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0014969_34	1095750.HMPREF9970_2261	134.0	2.53e-38	N/A	N/A
structural_annotation	UHGV-0014969_34	PF03869,NF041793,COG4691	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0014969_35	TIGR01725	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0014969	Yes	27,245	48	86	1