vOTU vOTU-170979

vOTU: vOTU-170979

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-170979
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-05724 → vGENUS-13017 → vOTU-170979
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1519067
Biosample ID	SAMEA2738148
Genome length (bp)	29,799 bps
CheckV completeness	74.96% (Medium-quality)
CDS count	42
CDS density	95.17%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1519067_1	K01447	54.2	0.0000000000000028	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1519067_1	phrog_635	143.7	1.3004e-42	endolysin	lysis
UniRef90	UHGV-1519067_1	UniRef90_A0A6H1F0K8	407.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-1519067_1	562981.HMPREF0428_01802	407.0	0	Ami_2	N/A
Pfam	UHGV-1519067_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1519067_1	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1519067_1	PF01510,PF18342,MF_04111,NF041850,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_2	phrog_962	89.4	4.4e-26	holin	lysis
UniRef90	UHGV-1519067_2	UniRef90_A0A2N6SFH9	161.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-1519067_2	1449338.JQLU01000005_gene3786	89.7	1.95e-22	COG5546 Small integral membrane protein	N/A
Pfam	UHGV-1519067_2	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1519067_2	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1519067_2	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1519067_2	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_3	phrog_32123	338.7	0	N/A	unknown function
UniRef90	UHGV-1519067_3	UniRef90_UPI00094EEBC2	337.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-1519067_3	997830.HMPREF1124_0614	317.0	0	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-1519067_3	COG3468	N/A	N/A	Autotransporter adhesin AidA	N/A
structural_annotation	UHGV-1519067_3	PF10651,NF032891	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_4	phrog_4257	85.9	4.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1519067_4	1123302.KB904167_gene532	73.6	0.00000000000000477	N/A	N/A
PHROG	UHGV-1519067_6	phrog_1210	148.6	0	PblB-type receptor binding	other
eggNOG-mapper	UHGV-1519067_6	936580.HMPREF1516_0707	311.0	0	N/A	N/A
Pfam	UHGV-1519067_6	PF07902	N/A	N/A	gp58-like protein	Gp58
Pfam	UHGV-1519067_6	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-1519067_6	PF13884	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1519067_7	PF21231,COG0806	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_8	phrog_6049	87.6	1.6e-27	tail fiber protein	tail
UniRef90	UHGV-1519067_8	UniRef90_A0A0T8EK90	118.0	6.37e-28	Hyaluronoglucosaminidase	N/A
eggNOG-mapper	UHGV-1519067_8	1321820.HMPREF1983_00921	172.0	1.4013e-45	N/A	N/A
Pfam	UHGV-1519067_8	PF18454	N/A	N/A	Major tropism determinant N-terminal domain	Mtd_N
structural_annotation	UHGV-1519067_8	PF03422,PF18454,NF033675,COG4935	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_9	phrog_2270	319.9	0	N/A	unknown function
UniRef90	UHGV-1519067_9	UniRef90_A0A2X4N412	766.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1519067_9	562981.HMPREF0428_00970	564.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1519067_9	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1519067_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1519067_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1519067_9	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1519067_9	PF14594,PF13620,TIGR01665,TIGR04183,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_10	phrog_33	59.2	8.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-1519067_10	UniRef90_A0A2X4NBW4	333.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1519067_10	562981.HMPREF0428_00971	323.0	0	phage tail	N/A
COG	UHGV-1519067_10	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1519067_10	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_11	phrog_1204	520.1	0	tail protein	tail
eggNOG-mapper	UHGV-1519067_11	562981.HMPREF0428_00972	483.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-1519067_11	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-1519067_11	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
NCBIFam	UHGV-1519067_11	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1519067_11	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1519067_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_12	phrog_706	209.9	0	N/A	unknown function
UniRef90	UHGV-1519067_12	UniRef90_A0A2X4RDY7	246.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1519067_12	562981.HMPREF0428_00973	231.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1519067_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1519067_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_13	phrog_1061	56.9	4.7e-16	N/A	unknown function
UniRef90	UHGV-1519067_13	UniRef90_A0A139RN56	90.5	4.47e-21	N/A	N/A
eggNOG-mapper	UHGV-1519067_13	562981.HMPREF0428_00974	123.0	7.67e-35	N/A	N/A
structural_annotation	UHGV-1519067_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_14	phrog_820	168.6	0	major tail protein	tail
UniRef90	UHGV-1519067_14	UniRef90_A0A0X8KMB0	274.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1519067_14	562981.HMPREF0428_00975	258.0	0	N/A	N/A
structural_annotation	UHGV-1519067_14	PF08813,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_15	phrog_913	145.6	1.4013e-43	minor head protein	head and packaging
UniRef90	UHGV-1519067_15	UniRef90_A0A2X4NB85	204.0	0	Minor capsid protein from bacteriophage	N/A
eggNOG-mapper	UHGV-1519067_15	562981.HMPREF0428_00976	194.0	0	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1519067_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1519067_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_16	phrog_556	62.7	6e-18	minor head protein	head and packaging
UniRef90	UHGV-1519067_16	UniRef90_A0A2X4NG99	139.0	2.28e-40	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1519067_16	1214217.ALNF01000014_gene1371	92.4	9.23e-23	Minor capsid protein	N/A
Pfam	UHGV-1519067_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1519067_16	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_17	phrog_793	77.4	1.6e-22	head-tail adaptor	connector
UniRef90	UHGV-1519067_17	UniRef90_A0A6H1F133	142.0	1.24001e-41	Capsid protein	N/A
eggNOG-mapper	UHGV-1519067_17	562981.HMPREF0428_00978	142.0	2.07953e-42	Minor capsid protein	N/A
Pfam	UHGV-1519067_17	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1519067_17	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_18	phrog_541	101.6	5.5e-30	head-tail adaptor	connector
UniRef90	UHGV-1519067_18	UniRef90_A0A501VK26	132.0	2.84e-37	N/A	N/A
eggNOG-mapper	UHGV-1519067_18	562981.HMPREF0428_00979	135.0	1.82e-39	N/A	N/A
PHROG	UHGV-1519067_19	phrog_933	41.9	0.000000000015	N/A	unknown function
PHROG	UHGV-1519067_20	phrog_840	414.3	0	major head protein	head and packaging
UniRef90	UHGV-1519067_20	UniRef90_A0A109WLT8	401.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1519067_20	1123302.KB904167_gene518	367.0	0	N/A	N/A
structural_annotation	UHGV-1519067_20	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_21	phrog_194	135.7	3.8e-40	head scaffolding protein	head and packaging
UniRef90	UHGV-1519067_21	UniRef90_A0A2X4R123	266.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1519067_21	646413.C5IUJ4_9CAUD	173.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1519067_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1519067_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_22	phrog_581	276.1	0	minor head protein	head and packaging
UniRef90	UHGV-1519067_22	UniRef90_A0A6H1F2E7	514.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1519067_22	562981.HMPREF0428_00983	514.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1519067_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-1519067_22	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_23	phrog_533	596.3	0	portal protein	head and packaging
UniRef90	UHGV-1519067_23	UniRef90_A0A2X4N9Z3	758.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1519067_23	562981.HMPREF0428_00984	747.0	0	portal protein	N/A
Pfam	UHGV-1519067_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1519067_23	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1519067_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1519067_24	K06909	273.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1519067_24	phrog_3717	154.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1519067_24	UniRef90_A0A0X8KME6	747.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1519067_24	562981.HMPREF0428_00985	730.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-1519067_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1519067_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1519067_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1519067_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1519067_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_25	phrog_309	165.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-1519067_25	UniRef90_A0A6I3PTE1	186.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1519067_25	413066.A1EAE0_9CAUD	173.0	0	endonuclease activity	N/A
structural_annotation	UHGV-1519067_25	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_26	phrog_36	55.1	0.0000000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-1519067_26	UniRef90_A0A6H1EZM9	104.0	9.14e-26	N/A	N/A
Pfam	UHGV-1519067_26	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1519067_26	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1519067_26	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1519067_31	1321820.HMPREF1983_00940	110.0	1.88e-28	N/A	N/A
PHROG	UHGV-1519067_32	phrog_2715	118.9	3.2e-35	N/A	unknown function
UniRef90	UHGV-1519067_32	UniRef90_A0A1B8RSY6	89.4	1.52e-19	N/A	N/A
eggNOG-mapper	UHGV-1519067_32	642492.Clole_0950	112.0	2.73e-29	N/A	N/A
structural_annotation	UHGV-1519067_32	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-1519067_34	phrog_98	79.3	4.9e-23	N/A	unknown function
UniRef90	UHGV-1519067_34	UniRef90_UPI0008076800	84.3	1.13e-18	YopX family protein	N/A
eggNOG-mapper	UHGV-1519067_34	1321820.HMPREF1983_00941	79.0	2.21e-17	YopX protein	N/A
Pfam	UHGV-1519067_34	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-1519067_34	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-1519067_34	PF09643,TIGR01671	N/A	N/A	N/A	N/A
KOfam	UHGV-1519067_36	K22300	47.0	0.00000000000053	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1519067_36	UniRef90_UPI001D18CC01	77.8	1.55e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1519067_36	218495.SUB0229	70.9	0.000000000000144	Helix-turn-helix	N/A
Pfam	UHGV-1519067_36	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1519067_36	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1519067_36	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1519067_37	K06223	60.8	2.3e-17	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-1519067_37	phrog_56	141.0	9.39991e-42	DNA methyltransferase	other
UniRef90	UHGV-1519067_37	UniRef90_A0A533I256	314.0	0	Site-specific DNA-methyltransferase (adenine-specific)	N/A
eggNOG-mapper	UHGV-1519067_37	745088.D4N4H5_9CAUD	272.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-1519067_37	MTase_II_00075	191.8	0	Type II methyltransferase	RM
Pfam	UHGV-1519067_37	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
structural_annotation	UHGV-1519067_37	PF02086,TIGR00571,COG0338	N/A	N/A	N/A	N/A
UniRef90	UHGV-1519067_38	UniRef90_UPI000A8B8BB9	55.5	0.00000000773	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1519067_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1519067_39	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-1519067_42	K01160	58.3	2.2e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1519067_42	phrog_140	87.7	1.3e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1519067_42	UniRef90_A0A6H1F2G2	167.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1519067_42	562981.HMPREF0428_01846	167.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1519067_42	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1519067_42	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1519067_42	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1519067	Yes	29,799	34	75	1