vOTU vOTU-171002

vOTU: vOTU-171002

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-171002
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 → vSUBFAM-00237 → vGENUS-20338 → vOTU-171002
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lactarius
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1538816
Biosample ID	SAMEA2738174
Genome length (bp)	28,836 bps
CheckV completeness	75.31% (Medium-quality)
CDS count	39
CDS density	92.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lactarius	Total connections	38	Host agreement	81.58
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.31)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1538816_1	phrog_5702	90.5	1.1e-27	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1538816_1	UniRef90_D3H756	167.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-1538816_1	365659.smi_0426	167.0	0	VRR-NUC domain	N/A
Pfam	UHGV-1538816_1	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-1538816_2	phrog_1921	44.6	0.0000000000024	N/A	unknown function
PHROG	UHGV-1538816_4	phrog_1992	163.4	0	MazG-like pyrophosphatase	other
UniRef90	UHGV-1538816_4	UniRef90_A0A6I3PU23	299.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1538816_4	999425.HMPREF9186_02016	266.0	0	Mazg nucleotide pyrophosphohydrolase	N/A
COG	UHGV-1538816_4	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-1538816_4	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_5	phrog_1691	126.5	7.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-1538816_5	226185.EF_0327	64.3	0.00000000000454	N/A	N/A
PHROG	UHGV-1538816_6	phrog_121	114.4	2.7e-35	N/A	unknown function
UniRef90	UHGV-1538816_6	UniRef90_UPI001CC01A57	224.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538816_6	585203.SMSK564_1299	151.0	8.01543e-43	N/A	N/A
Pfam	UHGV-1538816_6	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1538816_6	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_7	phrog_121	142.8	1.60028e-42	N/A	unknown function
UniRef90	UHGV-1538816_7	UniRef90_UPI000765711F	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538816_7	365659.smi_0429	127.0	5.88e-35	N/A	N/A
Pfam	UHGV-1538816_7	PF07852	N/A	N/A	N/A	DUF1642
structural_annotation	UHGV-1538816_7	PF07852	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_8	phrog_7711	133.1	1.1e-39	N/A	unknown function
UniRef90	UHGV-1538816_8	UniRef90_A0A0N7JDH6	134.0	3.6e-38	N/A	N/A
eggNOG-mapper	UHGV-1538816_8	1282664.H354_07595	216.0	0	N/A	N/A
PHROG	UHGV-1538816_10	phrog_36	85.3	8e-25	transcriptional regulator	transcription regulation
UniRef90	UHGV-1538816_10	UniRef90_A0A6I3PYK9	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538816_10	936580.HMPREF1516_0728	86.3	9.55e-20	sigma factor activity	N/A
Pfam	UHGV-1538816_10	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-1538816_10	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1538816_10	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1538816_11	K07474	94.5	2.2e-27	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1538816_11	phrog_51	114.0	1.2e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1538816_11	UniRef90_UPI0012BCB454	282.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-1538816_11	1054460.SPPN_00130	148.0	1.89175e-43	DNA packaging	N/A
Pfam	UHGV-1538816_11	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1538816_11	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1538816_11	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1538816_12	K06909	276.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1538816_12	phrog_3717	168.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1538816_12	UniRef90_UPI0012BD7EF5	853.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1538816_12	1121871.AUAT01000040_gene913	651.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-1538816_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1538816_12	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1538816_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1538816_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1538816_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_13	phrog_533	585.2	0	portal protein	head and packaging
UniRef90	UHGV-1538816_13	UniRef90_UPI001BE74F17	922.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1538816_13	537874.B3GW00_9CAUD	691.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1538816_13	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1538816_13	TIGR01542.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1538816_13	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_14	phrog_581	393.4	0	minor head protein	head and packaging
UniRef90	UHGV-1538816_14	UniRef90_A0A4D6A8A0	760.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1538816_14	537874.B3GW01_9CAUD	554.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1538816_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-1538816_14	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
structural_annotation	UHGV-1538816_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_15	phrog_2303	145.6	2.90069e-43	head scaffolding protein	head and packaging
UniRef90	UHGV-1538816_15	UniRef90_A0A150NS01	136.0	3.19e-37	N/A	N/A
eggNOG-mapper	UHGV-1538816_15	537874.B3GW02_9CAUD	141.0	8.57001e-40	N/A	N/A
PHROG	UHGV-1538816_16	phrog_840	418.5	0	major head protein	head and packaging
UniRef90	UHGV-1538816_16	UniRef90_UPI001BEAC940	547.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-1538816_16	1123302.KB904167_gene518	428.0	0	N/A	N/A
structural_annotation	UHGV-1538816_16	PF03864,MF_04119,TIGR04387,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_17	phrog_2910	49.1	0.000000000000092	N/A	unknown function
UniRef90	UHGV-1538816_17	UniRef90_U4KJ97	49.7	0.00000399	N/A	N/A
PHROG	UHGV-1538816_18	phrog_541	108.7	3.5e-32	head-tail adaptor	connector
UniRef90	UHGV-1538816_18	UniRef90_A0A3S4LW47	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538816_18	646413.C5IUJ7_9CAUD	157.0	0	N/A	N/A
PHROG	UHGV-1538816_19	phrog_793	84.3	8.7e-25	head-tail adaptor	connector
UniRef90	UHGV-1538816_19	UniRef90_UPI001BE5FBE4	235.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1538816_19	1121871.AUAT01000035_gene1284	89.7	9.84e-22	Minor capsid protein	N/A
Pfam	UHGV-1538816_19	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
structural_annotation	UHGV-1538816_19	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_20	phrog_556	79.3	4.3e-23	minor head protein	head and packaging
UniRef90	UHGV-1538816_20	UniRef90_UPI0012BC2934	224.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1538816_20	537874.B3GW08_9CAUD	144.0	5.22684e-43	Minor capsid protein	N/A
Pfam	UHGV-1538816_20	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1538816_20	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_21	phrog_913	138.8	1.6e-41	minor head protein	head and packaging
UniRef90	UHGV-1538816_21	UniRef90_UPI0012BB7B63	268.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1538816_21	1121871.AUAT01000035_gene1282	141.0	1.52994e-41	Minor capsid protein from bacteriophage	N/A
Pfam	UHGV-1538816_21	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1538816_21	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_22	phrog_820	180.3	0	major tail protein	tail
UniRef90	UHGV-1538816_22	UniRef90_UPI0012BD2CD1	285.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1538816_22	537874.B3GW10_9CAUD	232.0	0	N/A	N/A
structural_annotation	UHGV-1538816_22	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_23	phrog_1061	99.9	1.9e-29	N/A	unknown function
UniRef90	UHGV-1538816_23	UniRef90_A0A380KJJ3	90.5	3.09e-20	N/A	N/A
eggNOG-mapper	UHGV-1538816_23	537874.B3GW11_9CAUD	162.0	0	N/A	N/A
structural_annotation	UHGV-1538816_23	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_24	phrog_706	180.9	0	N/A	unknown function
UniRef90	UHGV-1538816_24	UniRef90_UPI001CBECD66	241.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1538816_24	537874.B3GW12_9CAUD	250.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1538816_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1538816_24	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-1538816_25	K20283	41.0	0.0000000000052	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-1538816_25	phrog_1686	767.9	0	tail length tape measure protein	tail
UniRef90	UHGV-1538816_25	UniRef90_UPI001F503712	1413.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-1538816_25	537874.B3GW13_9CAUD	869.0	0	N/A	N/A
Pfam	UHGV-1538816_25	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1538816_25	TIGR02675.1	N/A	N/A	tape measure protein	N/A
structural_annotation	UHGV-1538816_25	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_26	phrog_33	74.9	1.8e-21	distal tail protein Dit	tail
UniRef90	UHGV-1538816_26	UniRef90_A0A1F0ZPE5	454.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1538816_26	537874.B3GW14_9CAUD	280.0	0	Phage tail protein	N/A
Pfam	UHGV-1538816_26	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1538816_26	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
structural_annotation	UHGV-1538816_26	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_27	phrog_1330	284.2	0	tail protein	tail
UniRef90	UHGV-1538816_27	UniRef90_UPI0018978324	1315.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-1538816_27	537874.B3GW15_9CAUD	669.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-1538816_27	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-1538816_27	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-1538816_27	PF14594,PF07902,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1538816_28	UniRef90_F5W039	58.5	0.000000000346	Conserved domain protein	N/A
PHROG	UHGV-1538816_29	phrog_1554	208.7	0	N/A	unknown function
UniRef90	UHGV-1538816_29	UniRef90_A0A4V0EM35	156.0	1.12104e-44	N/A	N/A
eggNOG-mapper	UHGV-1538816_29	1005705.HMPREF9967_1055	301.0	0	N/A	N/A
structural_annotation	UHGV-1538816_29	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_30	phrog_4257	160.7	0	N/A	unknown function
UniRef90	UHGV-1538816_30	UniRef90_A0A139QI86	172.0	0	N/A	N/A
eggNOG-mapper	UHGV-1538816_30	1005705.HMPREF9967_1056	192.0	0	N/A	N/A
COG	UHGV-1538816_31	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_32	phrog_608	118.6	2.8e-35	holin	lysis
UniRef90	UHGV-1538816_32	UniRef90_I2NHW5	187.0	0	Phage holin, LL-H family	N/A
eggNOG-mapper	UHGV-1538816_32	585203.SMSK564_1272	110.0	7.16e-30	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1538816_32	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
NCBIFam	UHGV-1538816_32	TIGR01673.1	N/A	N/A	phage holin	N/A
PHROG	UHGV-1538816_33	phrog_998	342.7	0	endolysin	lysis
UniRef90	UHGV-1538816_33	UniRef90_UPI00066E4AC5	555.0	0	peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-1538816_33	1069533.Sinf_0802	419.0	0	Bacteriophage peptidoglycan hydrolase	N/A
Pfam	UHGV-1538816_33	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
Pfam	UHGV-1538816_33	PF16775	N/A	N/A	Target recognition domain of lytic exoenzyme	ZoocinA_TRD
COG	UHGV-1538816_33	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1538816_33	PF16775,PF05382,NF008096,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_34	phrog_6487	166.9	0	N/A	unknown function
UniRef90	UHGV-1538816_34	UniRef90_A0A0T8EKF4	118.0	3.97e-31	N/A	N/A
eggNOG-mapper	UHGV-1538816_34	999425.HMPREF9186_02053	218.0	0	N/A	N/A
structural_annotation	UHGV-1538816_34	PF10651,NF041178,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-1538816_35	phrog_4757	49.1	0.000000000000038	N/A	unknown function
PHROG	UHGV-1538816_36	phrog_21909	249.1	0	N/A	unknown function
UniRef90	UHGV-1538816_36	UniRef90_A0A4D6B362	199.0	0	Tail fiber protein	N/A
eggNOG-mapper	UHGV-1538816_36	999425.HMPREF9186_02055	221.0	0	N/A	N/A
PHROG	UHGV-1538816_38	phrog_1529	67.7	2.7e-19	N/A	unknown function
UniRef90	UHGV-1538816_38	UniRef90_UPI001ABE12EE	81.3	6.28e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1538816_38	1336234.JAGN01000025_gene751	71.6	5.7e-16	N/A	N/A
UniRef90	UHGV-1538816_39	UniRef90_V8LYN5	108.0	6.36e-30	Isoleucyl-tRNA synthetase	N/A
eggNOG-mapper	UHGV-1538816_39	999425.HMPREF9186_00617	124.0	8.34e-37	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1538816	Yes	28,836	41	75	1